data_2GTP
#
_model_server_result.job_id            -nO8vSsnElhPsUZ82cm9iQ 
_model_server_result.datetime_utc      '2024-11-28 15:54:14' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2gtp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":402}' 
#
_entry.id    2GTP 
#
_exptl.entry_id    2GTP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2GTP 
_cell.length_a            90.451 
_cell.length_b            102.904 
_cell.length_c            128.761 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2GTP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
? dimeric 2 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,F,G,K,N 1 1 
B,C,H,I,J,L,M 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A N GLU 12 A GLU 43 1_555 E AL ALF . A ALF 355 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.553 ? 
metalc ? metalc2 A OG SER 16 A SER 47 1_555 F MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? 
metalc ? metalc3 A NH2 ARG 147 A ARG 178 1_555 E AL ALF . A ALF 355 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.644 ? 
metalc ? metalc4 A NH1 ARG 147 A ARG 178 1_555 E AL ALF . A ALF 355 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.649 ? 
metalc ? metalc5 A OG1 THR 150 A THR 181 1_555 F MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? 
metalc ? metalc6 E AL ALF . A ALF 355 1_555 F MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.565 ? 
metalc ? metalc7 E F1 ALF . A ALF 355 1_555 F MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? 
metalc ? metalc8 E AL ALF . A ALF 355 1_555 G O2B GDP . A GDP 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.947 ? 
metalc ? metalc9 E AL ALF . A ALF 355 1_555 K O HOH . A HOH 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? 
metalc ? metalc10 F MG MG . A MG 401 1_555 G O1B GDP . A GDP 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.814 ? 
metalc ? metalc11 F MG MG . A MG 401 1_555 K O HOH . A HOH 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? 
metalc ? metalc12 F MG MG . A MG 401 1_555 K O HOH . A HOH 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? 
metalc ? metalc13 B OG SER 16 B SER 47 1_555 I MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.494 ? 
metalc ? metalc14 B OG1 THR 150 B THR 181 1_555 I MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? 
metalc ? metalc15 H AL ALF . B ALF 355 1_555 I MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.29 ? 
metalc ? metalc16 H F3 ALF . B ALF 355 1_555 I MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? 
metalc ? metalc17 H AL ALF . B ALF 355 1_555 J O2B GDP . B GDP 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.881 ? 
metalc ? metalc18 H AL ALF . B ALF 355 1_555 L O HOH . B HOH 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? 
metalc ? metalc19 I MG MG . B MG 402 1_555 J O2B GDP . B GDP 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.856 ? 
metalc ? metalc20 I MG MG . B MG 402 1_555 J O1B GDP . B GDP 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.748 ? 
metalc ? metalc21 I MG MG . B MG 402 1_555 L O HOH . B HOH 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? 
metalc ? metalc22 I MG MG . B MG 402 1_555 L O HOH . B HOH 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     2GTP 
_atom_sites.fract_transf_matrix[1][1]    0.011056 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009718 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007766 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 ALF A 1 355 1 ALF ALF . 
F 4 MG A 1 401 1 MG MG . 
G 5 GDP A 1 402 1 GDP GDP . 
H 3 ALF B 1 355 2 ALF ALF . 
I 4 MG B 1 402 2 MG MG . 
J 5 GDP B 1 403 2 GDP GDP . 
K 6 HOH A 1 403 1 HOH HOH . 
K 6 HOH A 2 404 2 HOH HOH . 
K 6 HOH A 3 405 5 HOH HOH . 
K 6 HOH A 4 406 7 HOH HOH . 
K 6 HOH A 5 407 8 HOH HOH . 
K 6 HOH A 6 408 11 HOH HOH . 
K 6 HOH A 7 409 12 HOH HOH . 
K 6 HOH A 8 410 13 HOH HOH . 
K 6 HOH A 9 411 17 HOH HOH . 
K 6 HOH A 10 412 18 HOH HOH . 
K 6 HOH A 11 413 19 HOH HOH . 
K 6 HOH A 12 414 22 HOH HOH . 
K 6 HOH A 13 415 23 HOH HOH . 
K 6 HOH A 14 416 24 HOH HOH . 
K 6 HOH A 15 417 25 HOH HOH . 
K 6 HOH A 16 418 31 HOH HOH . 
K 6 HOH A 17 419 32 HOH HOH . 
K 6 HOH A 18 420 34 HOH HOH . 
K 6 HOH A 19 421 35 HOH HOH . 
K 6 HOH A 20 422 37 HOH HOH . 
K 6 HOH A 21 423 42 HOH HOH . 
K 6 HOH A 22 424 43 HOH HOH . 
K 6 HOH A 23 425 45 HOH HOH . 
K 6 HOH A 24 426 50 HOH HOH . 
K 6 HOH A 25 427 51 HOH HOH . 
K 6 HOH A 26 428 57 HOH HOH . 
K 6 HOH A 27 429 62 HOH HOH . 
K 6 HOH A 28 430 63 HOH HOH . 
K 6 HOH A 29 431 67 HOH HOH . 
K 6 HOH A 30 432 70 HOH HOH . 
K 6 HOH A 31 433 75 HOH HOH . 
K 6 HOH A 32 434 79 HOH HOH . 
K 6 HOH A 33 435 84 HOH HOH . 
K 6 HOH A 34 436 85 HOH HOH . 
K 6 HOH A 35 437 87 HOH HOH . 
K 6 HOH A 36 438 88 HOH HOH . 
K 6 HOH A 37 439 91 HOH HOH . 
K 6 HOH A 38 440 100 HOH HOH . 
K 6 HOH A 39 441 102 HOH HOH . 
K 6 HOH A 40 442 104 HOH HOH . 
K 6 HOH A 41 443 107 HOH HOH . 
K 6 HOH A 42 444 108 HOH HOH . 
K 6 HOH A 43 445 109 HOH HOH . 
K 6 HOH A 44 446 110 HOH HOH . 
K 6 HOH A 45 447 111 HOH HOH . 
K 6 HOH A 46 448 113 HOH HOH . 
K 6 HOH A 47 449 116 HOH HOH . 
K 6 HOH A 48 450 118 HOH HOH . 
K 6 HOH A 49 451 120 HOH HOH . 
K 6 HOH A 50 452 126 HOH HOH . 
K 6 HOH A 51 453 131 HOH HOH . 
K 6 HOH A 52 454 133 HOH HOH . 
K 6 HOH A 53 455 136 HOH HOH . 
K 6 HOH A 54 456 139 HOH HOH . 
K 6 HOH A 55 457 140 HOH HOH . 
K 6 HOH A 56 458 141 HOH HOH . 
K 6 HOH A 57 459 144 HOH HOH . 
K 6 HOH A 58 460 145 HOH HOH . 
K 6 HOH A 59 461 148 HOH HOH . 
K 6 HOH A 60 462 149 HOH HOH . 
K 6 HOH A 61 463 150 HOH HOH . 
K 6 HOH A 62 464 154 HOH HOH . 
L 6 HOH B 1 404 3 HOH HOH . 
L 6 HOH B 2 405 4 HOH HOH . 
L 6 HOH B 3 406 6 HOH HOH . 
L 6 HOH B 4 407 9 HOH HOH . 
L 6 HOH B 5 408 10 HOH HOH . 
L 6 HOH B 6 409 16 HOH HOH . 
L 6 HOH B 7 410 20 HOH HOH . 
L 6 HOH B 8 411 21 HOH HOH . 
L 6 HOH B 9 412 27 HOH HOH . 
L 6 HOH B 10 413 28 HOH HOH . 
L 6 HOH B 11 414 30 HOH HOH . 
L 6 HOH B 12 415 33 HOH HOH . 
L 6 HOH B 13 416 36 HOH HOH . 
L 6 HOH B 14 417 38 HOH HOH . 
L 6 HOH B 15 418 40 HOH HOH . 
L 6 HOH B 16 419 41 HOH HOH . 
L 6 HOH B 17 420 46 HOH HOH . 
L 6 HOH B 18 421 49 HOH HOH . 
L 6 HOH B 19 422 52 HOH HOH . 
L 6 HOH B 20 423 54 HOH HOH . 
L 6 HOH B 21 424 58 HOH HOH . 
L 6 HOH B 22 425 59 HOH HOH . 
L 6 HOH B 23 426 60 HOH HOH . 
L 6 HOH B 24 427 61 HOH HOH . 
L 6 HOH B 25 428 65 HOH HOH . 
L 6 HOH B 26 429 66 HOH HOH . 
L 6 HOH B 27 430 71 HOH HOH . 
L 6 HOH B 28 431 72 HOH HOH . 
L 6 HOH B 29 432 73 HOH HOH . 
L 6 HOH B 30 433 76 HOH HOH . 
L 6 HOH B 31 434 77 HOH HOH . 
L 6 HOH B 32 435 78 HOH HOH . 
L 6 HOH B 33 436 80 HOH HOH . 
L 6 HOH B 34 437 81 HOH HOH . 
L 6 HOH B 35 438 89 HOH HOH . 
L 6 HOH B 36 439 90 HOH HOH . 
L 6 HOH B 37 440 93 HOH HOH . 
L 6 HOH B 38 441 98 HOH HOH . 
L 6 HOH B 39 442 112 HOH HOH . 
L 6 HOH B 40 443 121 HOH HOH . 
L 6 HOH B 41 444 122 HOH HOH . 
L 6 HOH B 42 445 124 HOH HOH . 
L 6 HOH B 43 446 129 HOH HOH . 
L 6 HOH B 44 447 132 HOH HOH . 
L 6 HOH B 45 448 134 HOH HOH . 
L 6 HOH B 46 449 135 HOH HOH . 
L 6 HOH B 47 450 137 HOH HOH . 
L 6 HOH B 48 451 146 HOH HOH . 
L 6 HOH B 49 452 147 HOH HOH . 
L 6 HOH B 50 453 153 HOH HOH . 
L 6 HOH B 51 454 155 HOH HOH . 
M 6 HOH C 1 193 53 HOH HOH . 
M 6 HOH C 2 194 55 HOH HOH . 
M 6 HOH C 3 195 64 HOH HOH . 
M 6 HOH C 4 196 68 HOH HOH . 
M 6 HOH C 5 197 69 HOH HOH . 
M 6 HOH C 6 198 74 HOH HOH . 
M 6 HOH C 7 199 82 HOH HOH . 
M 6 HOH C 8 200 86 HOH HOH . 
M 6 HOH C 9 201 94 HOH HOH . 
M 6 HOH C 10 202 115 HOH HOH . 
M 6 HOH C 11 203 117 HOH HOH . 
M 6 HOH C 12 204 130 HOH HOH . 
M 6 HOH C 13 205 142 HOH HOH . 
M 6 HOH C 14 206 152 HOH HOH . 
N 6 HOH D 1 193 29 HOH HOH . 
N 6 HOH D 2 194 39 HOH HOH . 
N 6 HOH D 3 195 95 HOH HOH . 
N 6 HOH D 4 196 97 HOH HOH . 
N 6 HOH D 5 197 105 HOH HOH . 
N 6 HOH D 6 198 114 HOH HOH . 
N 6 HOH D 7 199 125 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         I 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               -35.836 
_atom_site.Cartn_y               12.649 
_atom_site.Cartn_z               55.011 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        28.35 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           402 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           289 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#