data_2GUE # _model_server_result.job_id 1R9C0bQmqn3qXA-p1hmE6Q _model_server_result.datetime_utc '2024-11-26 17:06:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2gue # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"V","auth_seq_id":301}' # _entry.id 2GUE # _exptl.entry_id 2GUE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 21 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2GUE _cell.length_a 33.83 _cell.length_b 65.45 _cell.length_c 96.18 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2GUE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 V N N ? 3 W N N ? 3 X N N ? 3 Y N N ? 3 Z N N ? 3 AA N N ? 3 BA N N ? 3 CA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ACE 1 A ACE 0 1_555 A N SER 2 A SER 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale2 B C ACE 1 B ACE 0 1_555 B N SER 2 B SER 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 76 n n C1 C2 EDO sing 77 n n C1 H11 EDO sing 78 n n C1 H12 EDO sing 79 n n O1 HO1 EDO sing 80 n n C2 O2 EDO sing 81 n n C2 H21 EDO sing 82 n n C2 H22 EDO sing 83 n n O2 HO2 EDO sing 84 n n # _atom_sites.entry_id 2GUE _atom_sites.fract_transf_matrix[1][1] 0.029563 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015279 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010397 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 202 2 SO4 SO4 . D 2 SO4 A 1 204 4 SO4 SO4 . E 3 EDO A 1 302 2 EDO EDO . F 3 EDO A 1 303 3 EDO EDO . G 3 EDO A 1 304 4 EDO EDO . H 3 EDO A 1 305 5 EDO EDO . I 3 EDO A 1 307 7 EDO EDO . J 3 EDO A 1 308 8 EDO EDO . K 3 EDO A 1 310 10 EDO EDO . L 3 EDO A 1 311 11 EDO EDO . M 3 EDO A 1 312 12 EDO EDO . N 3 EDO A 1 314 14 EDO EDO . O 3 EDO A 1 315 15 EDO EDO . P 3 EDO A 1 316 16 EDO EDO . Q 3 EDO A 1 320 20 EDO EDO . R 4 NAG B 1 122 1 NAG NAG . S 2 SO4 B 1 201 1 SO4 SO4 . T 2 SO4 B 1 203 3 SO4 SO4 . U 2 SO4 B 1 205 5 SO4 SO4 . V 3 EDO B 1 301 1 EDO EDO . W 3 EDO B 1 306 6 EDO EDO . X 3 EDO B 1 309 9 EDO EDO . Y 3 EDO B 1 313 13 EDO EDO . Z 3 EDO B 1 317 17 EDO EDO . AA 3 EDO B 1 318 18 EDO EDO . BA 3 EDO B 1 319 19 EDO EDO . CA 3 EDO B 1 321 21 EDO EDO . DA 5 HOH A 1 321 1 HOH HOH . DA 5 HOH A 2 322 2 HOH HOH . DA 5 HOH A 3 323 6 HOH HOH . DA 5 HOH A 4 324 10 HOH HOH . DA 5 HOH A 5 325 11 HOH HOH . DA 5 HOH A 6 326 13 HOH HOH . DA 5 HOH A 7 327 14 HOH HOH . DA 5 HOH A 8 328 17 HOH HOH . DA 5 HOH A 9 329 18 HOH HOH . DA 5 HOH A 10 330 19 HOH HOH . DA 5 HOH A 11 331 20 HOH HOH . DA 5 HOH A 12 332 21 HOH HOH . DA 5 HOH A 13 333 23 HOH HOH . DA 5 HOH A 14 334 26 HOH HOH . DA 5 HOH A 15 335 27 HOH HOH . DA 5 HOH A 16 336 29 HOH HOH . DA 5 HOH A 17 337 31 HOH HOH . DA 5 HOH A 18 338 32 HOH HOH . DA 5 HOH A 19 339 33 HOH HOH . DA 5 HOH A 20 340 35 HOH HOH . DA 5 HOH A 21 341 36 HOH HOH . DA 5 HOH A 22 342 38 HOH HOH . DA 5 HOH A 23 343 39 HOH HOH . DA 5 HOH A 24 344 40 HOH HOH . DA 5 HOH A 25 345 41 HOH HOH . DA 5 HOH A 26 346 42 HOH HOH . DA 5 HOH A 27 347 43 HOH HOH . DA 5 HOH A 28 348 44 HOH HOH . DA 5 HOH A 29 349 46 HOH HOH . DA 5 HOH A 30 350 48 HOH HOH . DA 5 HOH A 31 351 49 HOH HOH . DA 5 HOH A 32 352 50 HOH HOH . DA 5 HOH A 33 353 54 HOH HOH . DA 5 HOH A 34 354 56 HOH HOH . DA 5 HOH A 35 355 58 HOH HOH . DA 5 HOH A 36 356 59 HOH HOH . DA 5 HOH A 37 357 64 HOH HOH . DA 5 HOH A 38 358 65 HOH HOH . DA 5 HOH A 39 359 69 HOH HOH . DA 5 HOH A 40 360 72 HOH HOH . DA 5 HOH A 41 361 75 HOH HOH . DA 5 HOH A 42 362 76 HOH HOH . DA 5 HOH A 43 363 77 HOH HOH . DA 5 HOH A 44 364 78 HOH HOH . DA 5 HOH A 45 365 79 HOH HOH . DA 5 HOH A 46 366 81 HOH HOH . DA 5 HOH A 47 367 83 HOH HOH . DA 5 HOH A 48 368 86 HOH HOH . DA 5 HOH A 49 369 87 HOH HOH . DA 5 HOH A 50 370 90 HOH HOH . DA 5 HOH A 51 371 91 HOH HOH . DA 5 HOH A 52 372 92 HOH HOH . DA 5 HOH A 53 373 93 HOH HOH . DA 5 HOH A 54 374 99 HOH HOH . DA 5 HOH A 55 375 101 HOH HOH . DA 5 HOH A 56 376 105 HOH HOH . DA 5 HOH A 57 377 106 HOH HOH . DA 5 HOH A 58 378 107 HOH HOH . DA 5 HOH A 59 379 108 HOH HOH . DA 5 HOH A 60 380 109 HOH HOH . DA 5 HOH A 61 381 113 HOH HOH . DA 5 HOH A 62 382 116 HOH HOH . DA 5 HOH A 63 383 119 HOH HOH . DA 5 HOH A 64 384 120 HOH HOH . DA 5 HOH A 65 385 121 HOH HOH . DA 5 HOH A 66 386 123 HOH HOH . EA 5 HOH B 1 322 3 HOH HOH . EA 5 HOH B 2 323 4 HOH HOH . EA 5 HOH B 3 324 5 HOH HOH . EA 5 HOH B 4 325 7 HOH HOH . EA 5 HOH B 5 326 8 HOH HOH . EA 5 HOH B 6 327 9 HOH HOH . EA 5 HOH B 7 328 12 HOH HOH . EA 5 HOH B 8 329 15 HOH HOH . EA 5 HOH B 9 330 16 HOH HOH . EA 5 HOH B 10 331 22 HOH HOH . EA 5 HOH B 11 332 24 HOH HOH . EA 5 HOH B 12 333 25 HOH HOH . EA 5 HOH B 13 334 28 HOH HOH . EA 5 HOH B 14 335 30 HOH HOH . EA 5 HOH B 15 336 34 HOH HOH . EA 5 HOH B 16 337 37 HOH HOH . EA 5 HOH B 17 338 45 HOH HOH . EA 5 HOH B 18 339 47 HOH HOH . EA 5 HOH B 19 340 51 HOH HOH . EA 5 HOH B 20 341 52 HOH HOH . EA 5 HOH B 21 342 53 HOH HOH . EA 5 HOH B 22 343 55 HOH HOH . EA 5 HOH B 23 344 57 HOH HOH . EA 5 HOH B 24 345 60 HOH HOH . EA 5 HOH B 25 346 61 HOH HOH . EA 5 HOH B 26 347 62 HOH HOH . EA 5 HOH B 27 348 63 HOH HOH . EA 5 HOH B 28 349 66 HOH HOH . EA 5 HOH B 29 350 67 HOH HOH . EA 5 HOH B 30 351 68 HOH HOH . EA 5 HOH B 31 352 70 HOH HOH . EA 5 HOH B 32 353 71 HOH HOH . EA 5 HOH B 33 354 73 HOH HOH . EA 5 HOH B 34 355 74 HOH HOH . EA 5 HOH B 35 356 80 HOH HOH . EA 5 HOH B 36 357 82 HOH HOH . EA 5 HOH B 37 358 84 HOH HOH . EA 5 HOH B 38 359 85 HOH HOH . EA 5 HOH B 39 360 88 HOH HOH . EA 5 HOH B 40 361 89 HOH HOH . EA 5 HOH B 41 362 94 HOH HOH . EA 5 HOH B 42 363 95 HOH HOH . EA 5 HOH B 43 364 96 HOH HOH . EA 5 HOH B 44 365 97 HOH HOH . EA 5 HOH B 45 366 98 HOH HOH . EA 5 HOH B 46 367 100 HOH HOH . EA 5 HOH B 47 368 102 HOH HOH . EA 5 HOH B 48 369 103 HOH HOH . EA 5 HOH B 49 370 104 HOH HOH . EA 5 HOH B 50 371 110 HOH HOH . EA 5 HOH B 51 372 111 HOH HOH . EA 5 HOH B 52 373 112 HOH HOH . EA 5 HOH B 53 374 114 HOH HOH . EA 5 HOH B 54 375 115 HOH HOH . EA 5 HOH B 55 376 117 HOH HOH . EA 5 HOH B 56 377 118 HOH HOH . EA 5 HOH B 57 378 124 HOH HOH . EA 5 HOH B 58 379 125 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . V 3 11.642 31.921 10.029 1 33.24 ? C1 EDO 301 B 1 HETATM 2 O O1 EDO . . . V 3 11.912 30.683 10.664 1 20.06 ? O1 EDO 301 B 1 HETATM 3 C C2 EDO . . . V 3 10.731 32.793 10.889 1 34.96 ? C2 EDO 301 B 1 HETATM 4 O O2 EDO . . . V 3 11.536 33.897 11.285 1 36.76 ? O2 EDO 301 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 39 _model_server_stats.query_time_ms 251 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #