data_2GWD # _model_server_result.job_id pbPrrPmvXo2EETK39jQUbA _model_server_result.datetime_utc '2025-03-06 02:10:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2gwd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":519}' # _entry.id 2GWD # _exptl.entry_id 2GWD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2GWD _cell.length_a 54.81 _cell.length_b 54.81 _cell.length_c 518.04 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2GWD _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_555 x,x-y,-z+1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 0 0 86.34 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 113 A CYS 178 1_555 A SG CYS 333 A CYS 398 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf2 A SG CYS 276 A CYS 341 1_555 A SG CYS 291 A CYS 356 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc1 A OE2 GLU 42 A GLU 107 1_555 B MG MG . A MG 515 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc2 A OE2 GLU 94 A GLU 159 1_555 B MG MG . A MG 515 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc3 A OE1 GLU 100 A GLU 165 1_555 B MG MG . A MG 515 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? metalc ? metalc4 B MG MG . A MG 515 1_555 H OE2 GLU . A GLU 521 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? metalc ? metalc5 B MG MG . A MG 515 1_555 I O HOH . A HOH 522 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc6 B MG MG . A MG 515 1_555 I O HOH . A HOH 523 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 2GWD _atom_sites.fract_transf_matrix[1][1] 0.018245 _atom_sites.fract_transf_matrix[1][2] 0.010534 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021067 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00193 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 515 1 MG MG . C 3 ACT A 1 516 3 ACT ACT . D 3 ACT A 1 517 4 ACT ACT . E 3 ACT A 1 518 5 ACT ACT . F 3 ACT A 1 519 6 ACT ACT . G 3 ACT A 1 520 7 ACT ACT . H 4 GLU A 1 521 2 GLU GLE . I 5 HOH A 1 522 1 HOH HOH . I 5 HOH A 2 523 2 HOH HOH . I 5 HOH A 3 524 3 HOH HOH . I 5 HOH A 4 525 4 HOH HOH . I 5 HOH A 5 526 5 HOH HOH . I 5 HOH A 6 527 6 HOH HOH . I 5 HOH A 7 528 7 HOH HOH . I 5 HOH A 8 529 8 HOH HOH . I 5 HOH A 9 530 9 HOH HOH . I 5 HOH A 10 531 10 HOH HOH . I 5 HOH A 11 532 11 HOH HOH . I 5 HOH A 12 533 12 HOH HOH . I 5 HOH A 13 534 13 HOH HOH . I 5 HOH A 14 535 14 HOH HOH . I 5 HOH A 15 536 15 HOH HOH . I 5 HOH A 16 537 16 HOH HOH . I 5 HOH A 17 538 17 HOH HOH . I 5 HOH A 18 539 18 HOH HOH . I 5 HOH A 19 540 19 HOH HOH . I 5 HOH A 20 541 20 HOH HOH . I 5 HOH A 21 542 21 HOH HOH . I 5 HOH A 22 543 22 HOH HOH . I 5 HOH A 23 544 23 HOH HOH . I 5 HOH A 24 545 24 HOH HOH . I 5 HOH A 25 546 25 HOH HOH . I 5 HOH A 26 547 26 HOH HOH . I 5 HOH A 27 548 27 HOH HOH . I 5 HOH A 28 549 28 HOH HOH . I 5 HOH A 29 550 29 HOH HOH . I 5 HOH A 30 551 30 HOH HOH . I 5 HOH A 31 552 31 HOH HOH . I 5 HOH A 32 553 32 HOH HOH . I 5 HOH A 33 554 33 HOH HOH . I 5 HOH A 34 555 34 HOH HOH . I 5 HOH A 35 556 35 HOH HOH . I 5 HOH A 36 557 36 HOH HOH . I 5 HOH A 37 558 37 HOH HOH . I 5 HOH A 38 559 38 HOH HOH . I 5 HOH A 39 560 39 HOH HOH . I 5 HOH A 40 561 40 HOH HOH . I 5 HOH A 41 562 41 HOH HOH . I 5 HOH A 42 563 42 HOH HOH . I 5 HOH A 43 564 43 HOH HOH . I 5 HOH A 44 565 44 HOH HOH . I 5 HOH A 45 566 45 HOH HOH . I 5 HOH A 46 567 46 HOH HOH . I 5 HOH A 47 568 47 HOH HOH . I 5 HOH A 48 569 48 HOH HOH . I 5 HOH A 49 570 49 HOH HOH . I 5 HOH A 50 571 50 HOH HOH . I 5 HOH A 51 572 51 HOH HOH . I 5 HOH A 52 573 52 HOH HOH . I 5 HOH A 53 574 53 HOH HOH . I 5 HOH A 54 575 54 HOH HOH . I 5 HOH A 55 576 55 HOH HOH . I 5 HOH A 56 577 56 HOH HOH . I 5 HOH A 57 578 57 HOH HOH . I 5 HOH A 58 579 58 HOH HOH . I 5 HOH A 59 580 59 HOH HOH . I 5 HOH A 60 581 60 HOH HOH . I 5 HOH A 61 582 61 HOH HOH . I 5 HOH A 62 583 62 HOH HOH . I 5 HOH A 63 584 63 HOH HOH . I 5 HOH A 64 585 64 HOH HOH . I 5 HOH A 65 586 65 HOH HOH . I 5 HOH A 66 587 66 HOH HOH . I 5 HOH A 67 588 67 HOH HOH . I 5 HOH A 68 589 68 HOH HOH . I 5 HOH A 69 590 69 HOH HOH . I 5 HOH A 70 591 70 HOH HOH . I 5 HOH A 71 592 71 HOH HOH . I 5 HOH A 72 593 72 HOH HOH . I 5 HOH A 73 594 73 HOH HOH . I 5 HOH A 74 595 74 HOH HOH . I 5 HOH A 75 596 75 HOH HOH . I 5 HOH A 76 597 76 HOH HOH . I 5 HOH A 77 598 77 HOH HOH . I 5 HOH A 78 599 78 HOH HOH . I 5 HOH A 79 600 79 HOH HOH . I 5 HOH A 80 601 80 HOH HOH . I 5 HOH A 81 602 81 HOH HOH . I 5 HOH A 82 603 82 HOH HOH . I 5 HOH A 83 604 83 HOH HOH . I 5 HOH A 84 605 84 HOH HOH . I 5 HOH A 85 606 85 HOH HOH . I 5 HOH A 86 607 86 HOH HOH . I 5 HOH A 87 608 87 HOH HOH . I 5 HOH A 88 609 88 HOH HOH . I 5 HOH A 89 610 89 HOH HOH . I 5 HOH A 90 611 90 HOH HOH . I 5 HOH A 91 612 91 HOH HOH . I 5 HOH A 92 613 92 HOH HOH . I 5 HOH A 93 614 93 HOH HOH . I 5 HOH A 94 615 94 HOH HOH . I 5 HOH A 95 616 95 HOH HOH . I 5 HOH A 96 617 96 HOH HOH . I 5 HOH A 97 618 97 HOH HOH . I 5 HOH A 98 619 98 HOH HOH . I 5 HOH A 99 620 99 HOH HOH . I 5 HOH A 100 621 100 HOH HOH . I 5 HOH A 101 622 101 HOH HOH . I 5 HOH A 102 623 102 HOH HOH . I 5 HOH A 103 624 103 HOH HOH . I 5 HOH A 104 625 104 HOH HOH . I 5 HOH A 105 626 105 HOH HOH . I 5 HOH A 106 627 106 HOH HOH . I 5 HOH A 107 628 107 HOH HOH . I 5 HOH A 108 629 108 HOH HOH . I 5 HOH A 109 630 109 HOH HOH . I 5 HOH A 110 631 110 HOH HOH . I 5 HOH A 111 632 111 HOH HOH . I 5 HOH A 112 633 112 HOH HOH . I 5 HOH A 113 634 113 HOH HOH . I 5 HOH A 114 635 114 HOH HOH . I 5 HOH A 115 636 115 HOH HOH . I 5 HOH A 116 637 116 HOH HOH . I 5 HOH A 117 638 117 HOH HOH . I 5 HOH A 118 639 118 HOH HOH . I 5 HOH A 119 640 119 HOH HOH . I 5 HOH A 120 641 120 HOH HOH . I 5 HOH A 121 642 121 HOH HOH . I 5 HOH A 122 643 122 HOH HOH . I 5 HOH A 123 644 123 HOH HOH . I 5 HOH A 124 645 124 HOH HOH . I 5 HOH A 125 646 125 HOH HOH . I 5 HOH A 126 647 126 HOH HOH . I 5 HOH A 127 648 127 HOH HOH . I 5 HOH A 128 649 128 HOH HOH . I 5 HOH A 129 650 129 HOH HOH . I 5 HOH A 130 651 130 HOH HOH . I 5 HOH A 131 652 131 HOH HOH . I 5 HOH A 132 653 132 HOH HOH . I 5 HOH A 133 654 133 HOH HOH . I 5 HOH A 134 655 134 HOH HOH . I 5 HOH A 135 656 135 HOH HOH . I 5 HOH A 136 657 136 HOH HOH . I 5 HOH A 137 658 137 HOH HOH . I 5 HOH A 138 659 138 HOH HOH . I 5 HOH A 139 660 139 HOH HOH . I 5 HOH A 140 661 140 HOH HOH . I 5 HOH A 141 662 141 HOH HOH . I 5 HOH A 142 663 142 HOH HOH . I 5 HOH A 143 664 143 HOH HOH . I 5 HOH A 144 665 144 HOH HOH . I 5 HOH A 145 666 145 HOH HOH . I 5 HOH A 146 667 146 HOH HOH . I 5 HOH A 147 668 147 HOH HOH . I 5 HOH A 148 669 148 HOH HOH . I 5 HOH A 149 670 149 HOH HOH . I 5 HOH A 150 671 150 HOH HOH . I 5 HOH A 151 672 151 HOH HOH . I 5 HOH A 152 673 152 HOH HOH . I 5 HOH A 153 674 153 HOH HOH . I 5 HOH A 154 675 154 HOH HOH . I 5 HOH A 155 676 155 HOH HOH . I 5 HOH A 156 677 156 HOH HOH . I 5 HOH A 157 678 157 HOH HOH . I 5 HOH A 158 679 158 HOH HOH . I 5 HOH A 159 680 159 HOH HOH . I 5 HOH A 160 681 160 HOH HOH . I 5 HOH A 161 682 161 HOH HOH . I 5 HOH A 162 683 162 HOH HOH . I 5 HOH A 163 684 163 HOH HOH . I 5 HOH A 164 685 164 HOH HOH . I 5 HOH A 165 686 165 HOH HOH . I 5 HOH A 166 687 166 HOH HOH . I 5 HOH A 167 688 167 HOH HOH . I 5 HOH A 168 689 168 HOH HOH . I 5 HOH A 169 690 169 HOH HOH . I 5 HOH A 170 691 170 HOH HOH . I 5 HOH A 171 692 171 HOH HOH . I 5 HOH A 172 693 172 HOH HOH . I 5 HOH A 173 694 173 HOH HOH . I 5 HOH A 174 695 174 HOH HOH . I 5 HOH A 175 696 175 HOH HOH . I 5 HOH A 176 697 176 HOH HOH . I 5 HOH A 177 698 177 HOH HOH . I 5 HOH A 178 699 178 HOH HOH . I 5 HOH A 179 700 179 HOH HOH . I 5 HOH A 180 701 180 HOH HOH . I 5 HOH A 181 702 181 HOH HOH . I 5 HOH A 182 703 182 HOH HOH . I 5 HOH A 183 704 183 HOH HOH . I 5 HOH A 184 705 184 HOH HOH . I 5 HOH A 185 706 185 HOH HOH . I 5 HOH A 186 707 186 HOH HOH . I 5 HOH A 187 708 187 HOH HOH . I 5 HOH A 188 709 188 HOH HOH . I 5 HOH A 189 710 189 HOH HOH . I 5 HOH A 190 711 190 HOH HOH . I 5 HOH A 191 712 191 HOH HOH . I 5 HOH A 192 713 192 HOH HOH . I 5 HOH A 193 714 193 HOH HOH . I 5 HOH A 194 715 194 HOH HOH . I 5 HOH A 195 716 195 HOH HOH . I 5 HOH A 196 717 196 HOH HOH . I 5 HOH A 197 718 197 HOH HOH . I 5 HOH A 198 719 198 HOH HOH . I 5 HOH A 199 720 199 HOH HOH . I 5 HOH A 200 721 200 HOH HOH . I 5 HOH A 201 722 201 HOH HOH . I 5 HOH A 202 723 202 HOH HOH . I 5 HOH A 203 724 203 HOH HOH . I 5 HOH A 204 725 204 HOH HOH . I 5 HOH A 205 726 205 HOH HOH . I 5 HOH A 206 727 206 HOH HOH . I 5 HOH A 207 728 207 HOH HOH . I 5 HOH A 208 729 208 HOH HOH . I 5 HOH A 209 730 209 HOH HOH . I 5 HOH A 210 731 210 HOH HOH . I 5 HOH A 211 732 211 HOH HOH . I 5 HOH A 212 733 212 HOH HOH . I 5 HOH A 213 734 213 HOH HOH . I 5 HOH A 214 735 214 HOH HOH . I 5 HOH A 215 736 215 HOH HOH . I 5 HOH A 216 737 216 HOH HOH . I 5 HOH A 217 738 217 HOH HOH . I 5 HOH A 218 739 218 HOH HOH . I 5 HOH A 219 740 219 HOH HOH . I 5 HOH A 220 741 220 HOH HOH . I 5 HOH A 221 742 221 HOH HOH . I 5 HOH A 222 743 222 HOH HOH . I 5 HOH A 223 744 223 HOH HOH . I 5 HOH A 224 745 224 HOH HOH . I 5 HOH A 225 746 225 HOH HOH . I 5 HOH A 226 747 226 HOH HOH . I 5 HOH A 227 748 227 HOH HOH . I 5 HOH A 228 749 228 HOH HOH . I 5 HOH A 229 750 229 HOH HOH . I 5 HOH A 230 751 230 HOH HOH . I 5 HOH A 231 752 231 HOH HOH . I 5 HOH A 232 753 232 HOH HOH . I 5 HOH A 233 754 233 HOH HOH . I 5 HOH A 234 755 234 HOH HOH . I 5 HOH A 235 756 235 HOH HOH . I 5 HOH A 236 757 236 HOH HOH . I 5 HOH A 237 758 237 HOH HOH . I 5 HOH A 238 759 238 HOH HOH . I 5 HOH A 239 760 239 HOH HOH . I 5 HOH A 240 761 240 HOH HOH . I 5 HOH A 241 762 241 HOH HOH . I 5 HOH A 242 763 242 HOH HOH . I 5 HOH A 243 764 243 HOH HOH . I 5 HOH A 244 765 244 HOH HOH . I 5 HOH A 245 766 245 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . F 3 48.242 30.834 11.953 1 43.36 ? C ACT 519 A 1 HETATM 2 O O ACT . . . F 3 47.036 30.509 12.023 1 43.52 ? O ACT 519 A 1 HETATM 3 O OXT ACT . . . F 3 48.891 31.367 12.884 1 43.08 ? OXT ACT 519 A 1 HETATM 4 C CH3 ACT . . . F 3 48.959 30.566 10.626 1 43.19 ? CH3 ACT 519 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #