data_2GYO # _model_server_result.job_id lCHnwWvvIQVkaDCZ_fiP7w _model_server_result.datetime_utc '2024-11-15 16:36:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2gyo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":963}' # _entry.id 2GYO # _exptl.entry_id 2GYO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 48.107 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description METHANETHIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2GYO _cell.length_a 64.31 _cell.length_b 81.91 _cell.length_c 121.75 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2GYO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 112 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 112 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id D _struct_conn.ptnr2_label_atom_id S _struct_conn.ptnr2_label_comp_id MEE _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id MEE _struct_conn.ptnr2_auth_seq_id 963 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.03 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C H4 S' _chem_comp.formula_weight 48.107 _chem_comp.id MEE _chem_comp.mon_nstd_flag . _chem_comp.name METHANETHIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2GYO _atom_sites.fract_transf_matrix[1][1] 0.01555 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012209 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008214 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 COA A 1 962 962 COA COA . D 3 MEE A 1 963 963 MEE MEE . E 4 SO4 B 1 318 1 SO4 SO4 . F 4 SO4 B 1 319 2 SO4 SO4 . G 5 HOH A 1 318 318 HOH HOH . G 5 HOH A 2 319 319 HOH HOH . G 5 HOH A 3 320 320 HOH HOH . G 5 HOH A 4 321 321 HOH HOH . G 5 HOH A 5 322 322 HOH HOH . G 5 HOH A 6 323 323 HOH HOH . G 5 HOH A 7 324 324 HOH HOH . G 5 HOH A 8 325 325 HOH HOH . G 5 HOH A 9 326 326 HOH HOH . G 5 HOH A 10 327 327 HOH HOH . G 5 HOH A 11 328 328 HOH HOH . G 5 HOH A 12 329 329 HOH HOH . G 5 HOH A 13 330 330 HOH HOH . G 5 HOH A 14 331 331 HOH HOH . G 5 HOH A 15 332 332 HOH HOH . G 5 HOH A 16 333 333 HOH HOH . G 5 HOH A 17 334 334 HOH HOH . G 5 HOH A 18 335 335 HOH HOH . G 5 HOH A 19 336 336 HOH HOH . G 5 HOH A 20 337 337 HOH HOH . G 5 HOH A 21 338 338 HOH HOH . G 5 HOH A 22 339 339 HOH HOH . G 5 HOH A 23 340 340 HOH HOH . G 5 HOH A 24 341 341 HOH HOH . G 5 HOH A 25 342 342 HOH HOH . G 5 HOH A 26 343 343 HOH HOH . G 5 HOH A 27 344 344 HOH HOH . G 5 HOH A 28 345 345 HOH HOH . G 5 HOH A 29 348 348 HOH HOH . G 5 HOH A 30 349 349 HOH HOH . G 5 HOH A 31 350 350 HOH HOH . G 5 HOH A 32 351 351 HOH HOH . G 5 HOH A 33 352 352 HOH HOH . G 5 HOH A 34 355 355 HOH HOH . G 5 HOH A 35 356 356 HOH HOH . G 5 HOH A 36 358 358 HOH HOH . G 5 HOH A 37 359 359 HOH HOH . G 5 HOH A 38 360 360 HOH HOH . G 5 HOH A 39 361 361 HOH HOH . G 5 HOH A 40 362 362 HOH HOH . G 5 HOH A 41 363 363 HOH HOH . G 5 HOH A 42 364 364 HOH HOH . G 5 HOH A 43 365 365 HOH HOH . G 5 HOH A 44 366 366 HOH HOH . G 5 HOH A 45 367 367 HOH HOH . G 5 HOH A 46 368 368 HOH HOH . G 5 HOH A 47 369 369 HOH HOH . G 5 HOH A 48 370 370 HOH HOH . G 5 HOH A 49 371 371 HOH HOH . G 5 HOH A 50 372 372 HOH HOH . G 5 HOH A 51 373 373 HOH HOH . G 5 HOH A 52 374 374 HOH HOH . G 5 HOH A 53 375 375 HOH HOH . G 5 HOH A 54 376 376 HOH HOH . G 5 HOH A 55 377 377 HOH HOH . G 5 HOH A 56 378 378 HOH HOH . G 5 HOH A 57 379 379 HOH HOH . G 5 HOH A 58 380 380 HOH HOH . G 5 HOH A 59 381 381 HOH HOH . G 5 HOH A 60 382 382 HOH HOH . G 5 HOH A 61 383 383 HOH HOH . G 5 HOH A 62 384 384 HOH HOH . G 5 HOH A 63 385 385 HOH HOH . G 5 HOH A 64 386 386 HOH HOH . G 5 HOH A 65 387 387 HOH HOH . G 5 HOH A 66 388 388 HOH HOH . G 5 HOH A 67 389 389 HOH HOH . G 5 HOH A 68 390 390 HOH HOH . G 5 HOH A 69 413 413 HOH HOH . G 5 HOH A 70 424 424 HOH HOH . G 5 HOH A 71 425 425 HOH HOH . G 5 HOH A 72 426 426 HOH HOH . G 5 HOH A 73 427 427 HOH HOH . G 5 HOH A 74 428 428 HOH HOH . G 5 HOH A 75 429 429 HOH HOH . G 5 HOH A 76 430 430 HOH HOH . G 5 HOH A 77 431 431 HOH HOH . G 5 HOH A 78 432 432 HOH HOH . G 5 HOH A 79 433 433 HOH HOH . G 5 HOH A 80 434 434 HOH HOH . G 5 HOH A 81 435 435 HOH HOH . G 5 HOH A 82 436 436 HOH HOH . G 5 HOH A 83 438 438 HOH HOH . G 5 HOH A 84 439 439 HOH HOH . G 5 HOH A 85 440 440 HOH HOH . G 5 HOH A 86 441 441 HOH HOH . G 5 HOH A 87 442 442 HOH HOH . G 5 HOH A 88 443 443 HOH HOH . G 5 HOH A 89 444 444 HOH HOH . G 5 HOH A 90 445 445 HOH HOH . G 5 HOH A 91 446 446 HOH HOH . G 5 HOH A 92 447 447 HOH HOH . G 5 HOH A 93 448 448 HOH HOH . G 5 HOH A 94 449 449 HOH HOH . G 5 HOH A 95 450 450 HOH HOH . G 5 HOH A 96 451 451 HOH HOH . G 5 HOH A 97 452 452 HOH HOH . G 5 HOH A 98 453 453 HOH HOH . G 5 HOH A 99 454 454 HOH HOH . G 5 HOH A 100 455 455 HOH HOH . G 5 HOH A 101 483 483 HOH HOH . G 5 HOH A 102 484 484 HOH HOH . G 5 HOH A 103 485 485 HOH HOH . G 5 HOH A 104 486 486 HOH HOH . G 5 HOH A 105 487 487 HOH HOH . G 5 HOH A 106 489 489 HOH HOH . G 5 HOH A 107 490 490 HOH HOH . G 5 HOH A 108 491 491 HOH HOH . G 5 HOH A 109 492 492 HOH HOH . G 5 HOH A 110 493 493 HOH HOH . G 5 HOH A 111 494 494 HOH HOH . G 5 HOH A 112 496 496 HOH HOH . G 5 HOH A 113 497 497 HOH HOH . G 5 HOH A 114 498 498 HOH HOH . G 5 HOH A 115 499 499 HOH HOH . G 5 HOH A 116 500 500 HOH HOH . G 5 HOH A 117 501 501 HOH HOH . G 5 HOH A 118 502 502 HOH HOH . G 5 HOH A 119 503 503 HOH HOH . G 5 HOH A 120 504 504 HOH HOH . G 5 HOH A 121 515 515 HOH HOH . G 5 HOH A 122 516 516 HOH HOH . G 5 HOH A 123 517 517 HOH HOH . G 5 HOH A 124 518 518 HOH HOH . G 5 HOH A 125 519 519 HOH HOH . G 5 HOH A 126 520 520 HOH HOH . G 5 HOH A 127 521 521 HOH HOH . G 5 HOH A 128 522 522 HOH HOH . G 5 HOH A 129 527 527 HOH HOH . G 5 HOH A 130 529 529 HOH HOH . G 5 HOH A 131 530 530 HOH HOH . G 5 HOH A 132 531 531 HOH HOH . G 5 HOH A 133 532 532 HOH HOH . G 5 HOH A 134 533 533 HOH HOH . G 5 HOH A 135 538 538 HOH HOH . G 5 HOH A 136 539 539 HOH HOH . G 5 HOH A 137 540 540 HOH HOH . G 5 HOH A 138 545 545 HOH HOH . G 5 HOH A 139 547 547 HOH HOH . H 5 HOH B 1 346 346 HOH HOH . H 5 HOH B 2 347 347 HOH HOH . H 5 HOH B 3 353 353 HOH HOH . H 5 HOH B 4 354 354 HOH HOH . H 5 HOH B 5 357 357 HOH HOH . H 5 HOH B 6 391 391 HOH HOH . H 5 HOH B 7 392 392 HOH HOH . H 5 HOH B 8 393 393 HOH HOH . H 5 HOH B 9 394 394 HOH HOH . H 5 HOH B 10 395 395 HOH HOH . H 5 HOH B 11 397 397 HOH HOH . H 5 HOH B 12 398 398 HOH HOH . H 5 HOH B 13 399 399 HOH HOH . H 5 HOH B 14 400 400 HOH HOH . H 5 HOH B 15 401 401 HOH HOH . H 5 HOH B 16 402 402 HOH HOH . H 5 HOH B 17 403 403 HOH HOH . H 5 HOH B 18 404 404 HOH HOH . H 5 HOH B 19 405 405 HOH HOH . H 5 HOH B 20 406 406 HOH HOH . H 5 HOH B 21 407 407 HOH HOH . H 5 HOH B 22 408 408 HOH HOH . H 5 HOH B 23 409 409 HOH HOH . H 5 HOH B 24 410 410 HOH HOH . H 5 HOH B 25 411 411 HOH HOH . H 5 HOH B 26 412 412 HOH HOH . H 5 HOH B 27 414 414 HOH HOH . H 5 HOH B 28 415 415 HOH HOH . H 5 HOH B 29 416 416 HOH HOH . H 5 HOH B 30 417 417 HOH HOH . H 5 HOH B 31 418 418 HOH HOH . H 5 HOH B 32 419 419 HOH HOH . H 5 HOH B 33 420 420 HOH HOH . H 5 HOH B 34 421 421 HOH HOH . H 5 HOH B 35 422 422 HOH HOH . H 5 HOH B 36 423 423 HOH HOH . H 5 HOH B 37 437 437 HOH HOH . H 5 HOH B 38 456 456 HOH HOH . H 5 HOH B 39 459 459 HOH HOH . H 5 HOH B 40 460 460 HOH HOH . H 5 HOH B 41 461 461 HOH HOH . H 5 HOH B 42 462 462 HOH HOH . H 5 HOH B 43 463 463 HOH HOH . H 5 HOH B 44 464 464 HOH HOH . H 5 HOH B 45 465 465 HOH HOH . H 5 HOH B 46 469 469 HOH HOH . H 5 HOH B 47 470 470 HOH HOH . H 5 HOH B 48 474 474 HOH HOH . H 5 HOH B 49 475 475 HOH HOH . H 5 HOH B 50 476 476 HOH HOH . H 5 HOH B 51 477 477 HOH HOH . H 5 HOH B 52 478 478 HOH HOH . H 5 HOH B 53 479 479 HOH HOH . H 5 HOH B 54 480 480 HOH HOH . H 5 HOH B 55 481 481 HOH HOH . H 5 HOH B 56 495 495 HOH HOH . H 5 HOH B 57 505 505 HOH HOH . H 5 HOH B 58 506 506 HOH HOH . H 5 HOH B 59 507 507 HOH HOH . H 5 HOH B 60 508 508 HOH HOH . H 5 HOH B 61 509 509 HOH HOH . H 5 HOH B 62 510 510 HOH HOH . H 5 HOH B 63 511 511 HOH HOH . H 5 HOH B 64 512 512 HOH HOH . H 5 HOH B 65 513 513 HOH HOH . H 5 HOH B 66 514 514 HOH HOH . H 5 HOH B 67 523 523 HOH HOH . H 5 HOH B 68 524 524 HOH HOH . H 5 HOH B 69 525 525 HOH HOH . H 5 HOH B 70 528 528 HOH HOH . H 5 HOH B 71 534 534 HOH HOH . H 5 HOH B 72 535 535 HOH HOH . H 5 HOH B 73 536 536 HOH HOH . H 5 HOH B 74 537 537 HOH HOH . H 5 HOH B 75 541 541 HOH HOH . H 5 HOH B 76 542 542 HOH HOH . H 5 HOH B 77 543 543 HOH HOH . H 5 HOH B 78 544 544 HOH HOH . H 5 HOH B 79 546 546 HOH HOH . H 5 HOH B 80 548 548 HOH HOH . H 5 HOH B 81 549 549 HOH HOH . H 5 HOH B 82 550 550 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C MEE . . . D 3 43.611 74.901 75.116 0.8 28.74 ? C MEE 963 A 1 HETATM 2 S S MEE . . . D 3 43.665 74.755 73.345 0.8 40.55 ? S MEE 963 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 411 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 2 #