data_2GZI
#
_model_server_result.job_id            XscnPQFeZMkyM2ZI3QiR8w 
_model_server_result.datetime_utc      '2025-04-22 15:47:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2gzi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":503}' 
#
_entry.id    2GZI 
#
_exptl.entry_id    2GZI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              94.971 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHATE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2GZI 
_cell.length_a            44.19 
_cell.length_b            52.45 
_cell.length_c            89.11 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2GZI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B ND1 HIS 102 B HIS 102 1_555 C ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? 
metalc ? metalc2 B NE2 HIS 127 B HIS 127 1_555 C ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? 
metalc ? metalc3 B NE2 HIS 131 B HIS 131 1_555 C ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? 
metalc ? metalc4 C ZN ZN . B ZN 301 1_555 D O3 PO4 . B PO4 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.888 ? 
#
_chem_comp.formula           'O4 P -3' 
_chem_comp.formula_weight    94.971 
_chem_comp.id                PO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1 PO4 doub 260 n n 
P O2 PO4 sing 261 n n 
P O3 PO4 sing 262 n n 
P O4 PO4 sing 263 n n 
#
_atom_sites.entry_id                     2GZI 
_atom_sites.fract_transf_matrix[1][1]    0.02263 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01907 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01122 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 ZN B 1 301 301 ZN ZN . 
D 4 PO4 B 1 503 503 PO4 PO4 . 
E 5 HOH A 1 87 3 HOH HOH . 
E 5 HOH A 2 88 6 HOH HOH . 
E 5 HOH A 3 89 7 HOH HOH . 
E 5 HOH A 4 90 10 HOH HOH . 
E 5 HOH A 5 91 11 HOH HOH . 
E 5 HOH A 6 92 14 HOH HOH . 
E 5 HOH A 7 93 15 HOH HOH . 
E 5 HOH A 8 94 17 HOH HOH . 
E 5 HOH A 9 95 19 HOH HOH . 
E 5 HOH A 10 96 20 HOH HOH . 
E 5 HOH A 11 97 24 HOH HOH . 
E 5 HOH A 12 98 25 HOH HOH . 
E 5 HOH A 13 99 26 HOH HOH . 
E 5 HOH A 14 100 27 HOH HOH . 
E 5 HOH A 15 101 33 HOH HOH . 
E 5 HOH A 16 102 43 HOH HOH . 
E 5 HOH A 17 103 47 HOH HOH . 
E 5 HOH A 18 104 49 HOH HOH . 
E 5 HOH A 19 105 50 HOH HOH . 
E 5 HOH A 20 106 51 HOH HOH . 
E 5 HOH A 21 107 55 HOH HOH . 
E 5 HOH A 22 108 57 HOH HOH . 
E 5 HOH A 23 109 62 HOH HOH . 
E 5 HOH A 24 110 63 HOH HOH . 
E 5 HOH A 25 111 65 HOH HOH . 
E 5 HOH A 26 112 66 HOH HOH . 
E 5 HOH A 27 113 69 HOH HOH . 
E 5 HOH A 28 114 70 HOH HOH . 
E 5 HOH A 29 115 71 HOH HOH . 
E 5 HOH A 30 116 72 HOH HOH . 
E 5 HOH A 31 117 73 HOH HOH . 
E 5 HOH A 32 118 75 HOH HOH . 
E 5 HOH A 33 119 77 HOH HOH . 
E 5 HOH A 34 120 79 HOH HOH . 
E 5 HOH A 35 121 81 HOH HOH . 
E 5 HOH A 36 122 82 HOH HOH . 
E 5 HOH A 37 123 85 HOH HOH . 
E 5 HOH A 38 124 86 HOH HOH . 
E 5 HOH A 39 125 87 HOH HOH . 
E 5 HOH A 40 126 91 HOH HOH . 
E 5 HOH A 41 127 95 HOH HOH . 
E 5 HOH A 42 128 106 HOH HOH . 
E 5 HOH A 43 129 110 HOH HOH . 
E 5 HOH A 44 130 111 HOH HOH . 
E 5 HOH A 45 131 114 HOH HOH . 
E 5 HOH A 46 132 117 HOH HOH . 
E 5 HOH A 47 133 118 HOH HOH . 
E 5 HOH A 48 134 119 HOH HOH . 
E 5 HOH A 49 135 120 HOH HOH . 
E 5 HOH A 50 136 123 HOH HOH . 
E 5 HOH A 51 137 126 HOH HOH . 
E 5 HOH A 52 138 128 HOH HOH . 
E 5 HOH A 53 139 130 HOH HOH . 
E 5 HOH A 54 140 131 HOH HOH . 
E 5 HOH A 55 141 132 HOH HOH . 
E 5 HOH A 56 142 138 HOH HOH . 
E 5 HOH A 57 143 139 HOH HOH . 
E 5 HOH A 58 144 140 HOH HOH . 
E 5 HOH A 59 145 142 HOH HOH . 
E 5 HOH A 60 146 147 HOH HOH . 
E 5 HOH A 61 147 148 HOH HOH . 
E 5 HOH A 62 148 149 HOH HOH . 
E 5 HOH A 63 149 154 HOH HOH . 
E 5 HOH A 64 150 155 HOH HOH . 
E 5 HOH A 65 151 156 HOH HOH . 
E 5 HOH A 66 152 157 HOH HOH . 
E 5 HOH A 67 153 163 HOH HOH . 
E 5 HOH A 68 154 166 HOH HOH . 
E 5 HOH A 69 155 173 HOH HOH . 
E 5 HOH A 70 156 174 HOH HOH . 
E 5 HOH A 71 157 176 HOH HOH . 
E 5 HOH A 72 158 177 HOH HOH . 
E 5 HOH A 73 159 178 HOH HOH . 
E 5 HOH A 74 160 180 HOH HOH . 
E 5 HOH A 75 161 181 HOH HOH . 
E 5 HOH A 76 162 183 HOH HOH . 
E 5 HOH A 77 163 184 HOH HOH . 
E 5 HOH A 78 164 185 HOH HOH . 
E 5 HOH A 79 165 186 HOH HOH . 
E 5 HOH A 80 166 190 HOH HOH . 
E 5 HOH A 81 167 194 HOH HOH . 
E 5 HOH A 82 168 195 HOH HOH . 
E 5 HOH A 83 169 198 HOH HOH . 
E 5 HOH A 84 170 199 HOH HOH . 
E 5 HOH A 85 171 201 HOH HOH . 
F 5 HOH B 1 504 1 HOH HOH . 
F 5 HOH B 2 505 2 HOH HOH . 
F 5 HOH B 3 506 4 HOH HOH . 
F 5 HOH B 4 507 5 HOH HOH . 
F 5 HOH B 5 508 8 HOH HOH . 
F 5 HOH B 6 509 9 HOH HOH . 
F 5 HOH B 7 510 12 HOH HOH . 
F 5 HOH B 8 511 13 HOH HOH . 
F 5 HOH B 9 512 16 HOH HOH . 
F 5 HOH B 10 513 18 HOH HOH . 
F 5 HOH B 11 514 21 HOH HOH . 
F 5 HOH B 12 515 22 HOH HOH . 
F 5 HOH B 13 516 23 HOH HOH . 
F 5 HOH B 14 517 28 HOH HOH . 
F 5 HOH B 15 518 29 HOH HOH . 
F 5 HOH B 16 519 30 HOH HOH . 
F 5 HOH B 17 520 31 HOH HOH . 
F 5 HOH B 18 521 32 HOH HOH . 
F 5 HOH B 19 522 34 HOH HOH . 
F 5 HOH B 20 523 35 HOH HOH . 
F 5 HOH B 21 524 36 HOH HOH . 
F 5 HOH B 22 525 37 HOH HOH . 
F 5 HOH B 23 526 38 HOH HOH . 
F 5 HOH B 24 527 39 HOH HOH . 
F 5 HOH B 25 528 40 HOH HOH . 
F 5 HOH B 26 529 41 HOH HOH . 
F 5 HOH B 27 530 42 HOH HOH . 
F 5 HOH B 28 531 44 HOH HOH . 
F 5 HOH B 29 532 45 HOH HOH . 
F 5 HOH B 30 533 46 HOH HOH . 
F 5 HOH B 31 534 48 HOH HOH . 
F 5 HOH B 32 535 52 HOH HOH . 
F 5 HOH B 33 536 53 HOH HOH . 
F 5 HOH B 34 537 54 HOH HOH . 
F 5 HOH B 35 538 56 HOH HOH . 
F 5 HOH B 36 539 58 HOH HOH . 
F 5 HOH B 37 540 59 HOH HOH . 
F 5 HOH B 38 541 60 HOH HOH . 
F 5 HOH B 39 542 61 HOH HOH . 
F 5 HOH B 40 543 64 HOH HOH . 
F 5 HOH B 41 544 67 HOH HOH . 
F 5 HOH B 42 545 68 HOH HOH . 
F 5 HOH B 43 546 74 HOH HOH . 
F 5 HOH B 44 547 76 HOH HOH . 
F 5 HOH B 45 548 78 HOH HOH . 
F 5 HOH B 46 549 80 HOH HOH . 
F 5 HOH B 47 550 83 HOH HOH . 
F 5 HOH B 48 551 84 HOH HOH . 
F 5 HOH B 49 552 88 HOH HOH . 
F 5 HOH B 50 553 89 HOH HOH . 
F 5 HOH B 51 554 90 HOH HOH . 
F 5 HOH B 52 555 92 HOH HOH . 
F 5 HOH B 53 556 93 HOH HOH . 
F 5 HOH B 54 557 94 HOH HOH . 
F 5 HOH B 55 558 96 HOH HOH . 
F 5 HOH B 56 559 97 HOH HOH . 
F 5 HOH B 57 560 98 HOH HOH . 
F 5 HOH B 58 561 99 HOH HOH . 
F 5 HOH B 59 562 100 HOH HOH . 
F 5 HOH B 60 563 101 HOH HOH . 
F 5 HOH B 61 564 102 HOH HOH . 
F 5 HOH B 62 565 103 HOH HOH . 
F 5 HOH B 63 566 104 HOH HOH . 
F 5 HOH B 64 567 105 HOH HOH . 
F 5 HOH B 65 568 107 HOH HOH . 
F 5 HOH B 66 569 108 HOH HOH . 
F 5 HOH B 67 570 109 HOH HOH . 
F 5 HOH B 68 571 112 HOH HOH . 
F 5 HOH B 69 572 113 HOH HOH . 
F 5 HOH B 70 573 115 HOH HOH . 
F 5 HOH B 71 574 116 HOH HOH . 
F 5 HOH B 72 575 121 HOH HOH . 
F 5 HOH B 73 576 122 HOH HOH . 
F 5 HOH B 74 577 124 HOH HOH . 
F 5 HOH B 75 578 125 HOH HOH . 
F 5 HOH B 76 579 127 HOH HOH . 
F 5 HOH B 77 580 129 HOH HOH . 
F 5 HOH B 78 581 133 HOH HOH . 
F 5 HOH B 79 582 134 HOH HOH . 
F 5 HOH B 80 583 135 HOH HOH . 
F 5 HOH B 81 584 136 HOH HOH . 
F 5 HOH B 82 585 137 HOH HOH . 
F 5 HOH B 83 586 141 HOH HOH . 
F 5 HOH B 84 587 143 HOH HOH . 
F 5 HOH B 85 588 144 HOH HOH . 
F 5 HOH B 86 589 145 HOH HOH . 
F 5 HOH B 87 590 146 HOH HOH . 
F 5 HOH B 88 591 150 HOH HOH . 
F 5 HOH B 89 592 151 HOH HOH . 
F 5 HOH B 90 593 152 HOH HOH . 
F 5 HOH B 91 594 153 HOH HOH . 
F 5 HOH B 92 595 158 HOH HOH . 
F 5 HOH B 93 596 159 HOH HOH . 
F 5 HOH B 94 597 160 HOH HOH . 
F 5 HOH B 95 598 161 HOH HOH . 
F 5 HOH B 96 599 162 HOH HOH . 
F 5 HOH B 97 600 164 HOH HOH . 
F 5 HOH B 98 601 165 HOH HOH . 
F 5 HOH B 99 602 167 HOH HOH . 
F 5 HOH B 100 603 168 HOH HOH . 
F 5 HOH B 101 604 169 HOH HOH . 
F 5 HOH B 102 605 170 HOH HOH . 
F 5 HOH B 103 606 171 HOH HOH . 
F 5 HOH B 104 607 172 HOH HOH . 
F 5 HOH B 105 608 175 HOH HOH . 
F 5 HOH B 106 609 179 HOH HOH . 
F 5 HOH B 107 610 182 HOH HOH . 
F 5 HOH B 108 611 187 HOH HOH . 
F 5 HOH B 109 612 188 HOH HOH . 
F 5 HOH B 110 613 189 HOH HOH . 
F 5 HOH B 111 614 191 HOH HOH . 
F 5 HOH B 112 615 192 HOH HOH . 
F 5 HOH B 113 616 193 HOH HOH . 
F 5 HOH B 114 617 196 HOH HOH . 
F 5 HOH B 115 618 197 HOH HOH . 
F 5 HOH B 116 619 200 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P PO4 . . . D 4 10.396 14.173 35.099 1 30.95 ? P PO4 503 B 1 
HETATM 2 O O1 PO4 . . . D 4 11.022 14.615 36.394 1 33.12 ? O1 PO4 503 B 1 
HETATM 3 O O2 PO4 . . . D 4 9.24 13.306 35.597 1 36.76 ? O2 PO4 503 B 1 
HETATM 4 O O3 PO4 . . . D 4 11.306 13.277 34.296 1 30.51 ? O3 PO4 503 B 1 
HETATM 5 O O4 PO4 . . . D 4 9.754 15.255 34.293 1 33.82 ? O4 PO4 503 B 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           361 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           5 
#