data_2H1H
#
_model_server_result.job_id            q9JLhpPf1NWRwJ_UU2im8w 
_model_server_result.datetime_utc      '2025-03-26 20:47:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2h1h 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":400}' 
#
_entry.id    2H1H 
#
_exptl.entry_id    2H1H 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              621.359 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUORO HEPTOSE" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2H1H 
_cell.length_a            77.53 
_cell.length_b            88.9 
_cell.length_c            90.8 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2H1H 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C17 H26 F N5 O15 P2' 
_chem_comp.formula_weight    621.359 
_chem_comp.id                AFH 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUORO HEPTOSE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '[(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL (2S,3R,4S,5S,6R)-6-[(1S)-1,2-DIHYDROXYETHYL]-3-FLUORO-4,5-DIHYDROXYTETRAHYDRO-2H-PYRAN-2-YL DIHYDROGEN DIPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N9 C8 AFH sing 1 n y 
N9 C4 AFH sing 2 n y 
N9 C1D AFH sing 3 n n 
C8 N7 AFH doub 4 n y 
C8 H8 AFH sing 5 n n 
N7 C5 AFH sing 6 n y 
C5 C6 AFH sing 7 n y 
C5 C4 AFH doub 8 n y 
C6 N6 AFH sing 9 n n 
C6 N1 AFH doub 10 n y 
N6 HN61 AFH sing 11 n n 
N6 HN62 AFH sing 12 n n 
N1 C2 AFH sing 13 n y 
C2 N3 AFH doub 14 n y 
C2 H2 AFH sing 15 n n 
N3 C4 AFH sing 16 n y 
C1D C2D AFH sing 17 n n 
C1D O4D AFH sing 18 n n 
C1D H1D AFH sing 19 n n 
C2D O2' AFH sing 20 n n 
C2D C3D AFH sing 21 n n 
C2D H2D AFH sing 22 n n 
O2' HO2' AFH sing 23 n n 
C3D C4D AFH sing 24 n n 
C3D O3D AFH sing 25 n n 
C3D H3D AFH sing 26 n n 
C4D O4D AFH sing 27 n n 
C4D C5D AFH sing 28 n n 
C4D H4D AFH sing 29 n n 
O3D HO3A AFH sing 30 n n 
C5D O5D AFH sing 31 n n 
C5D "H5'1" AFH sing 32 n n 
C5D "H5'2" AFH sing 33 n n 
O5D PA AFH sing 34 n n 
PA O1A AFH doub 35 n n 
PA O2A AFH sing 36 n n 
PA O3A AFH sing 37 n n 
O2A HO2A AFH sing 38 n n 
O3A PB AFH sing 39 n n 
PB O1B AFH doub 40 n n 
PB O2B AFH sing 41 n n 
PB O3B AFH sing 42 n n 
O2B HO2B AFH sing 43 n n 
O3B C1' AFH sing 44 n n 
C1' C2' AFH sing 45 n n 
C1' O5' AFH sing 46 n n 
C1' H1' AFH sing 47 n n 
C2' C3' AFH sing 48 n n 
C2' F AFH sing 49 n n 
C2' H2' AFH sing 50 n n 
C3' C4' AFH sing 51 n n 
C3' O3' AFH sing 52 n n 
C3' H3' AFH sing 53 n n 
C4' C5' AFH sing 54 n n 
C4' O4' AFH sing 55 n n 
C4' H4' AFH sing 56 n n 
C5' C6' AFH sing 57 n n 
C5' O5' AFH sing 58 n n 
C5' H5' AFH sing 59 n n 
C6' C7' AFH sing 60 n n 
C6' O6' AFH sing 61 n n 
C6' H6' AFH sing 62 n n 
C7' O7' AFH sing 63 n n 
C7' "H7'1" AFH sing 64 n n 
C7' "H7'2" AFH sing 65 n n 
O3' HO3' AFH sing 66 n n 
O4' HO4' AFH sing 67 n n 
O6' HO6' AFH sing 68 n n 
O7' HO7' AFH sing 69 n n 
#
_atom_sites.entry_id                     2H1H 
_atom_sites.fract_transf_matrix[1][1]    0.012898 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011249 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011013 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 AFH A 1 400 400 AFH AFH . 
D 2 AFH B 1 400 400 AFH AFH . 
E 3 HOH A 1 401 1 HOH WAT . 
E 3 HOH A 2 402 2 HOH WAT . 
E 3 HOH A 3 403 3 HOH WAT . 
E 3 HOH A 4 404 4 HOH WAT . 
E 3 HOH A 5 405 5 HOH WAT . 
E 3 HOH A 6 406 6 HOH WAT . 
E 3 HOH A 7 407 7 HOH WAT . 
E 3 HOH A 8 408 8 HOH WAT . 
E 3 HOH A 9 409 9 HOH WAT . 
E 3 HOH A 10 410 10 HOH WAT . 
E 3 HOH A 11 411 11 HOH WAT . 
E 3 HOH A 12 412 12 HOH WAT . 
E 3 HOH A 13 413 13 HOH WAT . 
E 3 HOH A 14 414 14 HOH WAT . 
E 3 HOH A 15 415 32 HOH WAT . 
E 3 HOH A 16 416 33 HOH WAT . 
E 3 HOH A 17 417 34 HOH WAT . 
E 3 HOH A 18 418 35 HOH WAT . 
E 3 HOH A 19 419 36 HOH WAT . 
E 3 HOH A 20 420 37 HOH WAT . 
E 3 HOH A 21 421 38 HOH WAT . 
E 3 HOH A 22 422 39 HOH WAT . 
E 3 HOH A 23 423 40 HOH WAT . 
E 3 HOH A 24 424 41 HOH WAT . 
E 3 HOH A 25 425 42 HOH WAT . 
E 3 HOH A 26 426 43 HOH WAT . 
F 3 HOH B 1 401 15 HOH WAT . 
F 3 HOH B 2 402 16 HOH WAT . 
F 3 HOH B 3 403 17 HOH WAT . 
F 3 HOH B 4 404 18 HOH WAT . 
F 3 HOH B 5 405 19 HOH WAT . 
F 3 HOH B 6 406 20 HOH WAT . 
F 3 HOH B 7 407 21 HOH WAT . 
F 3 HOH B 8 408 22 HOH WAT . 
F 3 HOH B 9 409 23 HOH WAT . 
F 3 HOH B 10 410 24 HOH WAT . 
F 3 HOH B 11 411 25 HOH WAT . 
F 3 HOH B 12 412 26 HOH WAT . 
F 3 HOH B 13 413 27 HOH WAT . 
F 3 HOH B 14 414 28 HOH WAT . 
F 3 HOH B 15 415 29 HOH WAT . 
F 3 HOH B 16 416 30 HOH WAT . 
F 3 HOH B 17 417 31 HOH WAT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N9 AFH . . . D 2 6.764 16.333 4.873 1 48.2 ? N9 AFH 400 B 1 
HETATM 2 C C8 AFH . . . D 2 7.676 15.605 4.168 1 48.5 ? C8 AFH 400 B 1 
HETATM 3 N N7 AFH . . . D 2 8.794 15.477 4.86 1 48.56 ? N7 AFH 400 B 1 
HETATM 4 C C5 AFH . . . D 2 8.652 16.097 6.006 1 48.15 ? C5 AFH 400 B 1 
HETATM 5 C C6 AFH . . . D 2 9.467 16.322 7.168 1 48.22 ? C6 AFH 400 B 1 
HETATM 6 N N6 AFH . . . D 2 10.702 15.802 7.179 1 47.78 ? N6 AFH 400 B 1 
HETATM 7 N N1 AFH . . . D 2 8.974 17.072 8.277 1 47.69 ? N1 AFH 400 B 1 
HETATM 8 C C2 AFH . . . D 2 7.701 17.61 8.274 1 46.02 ? C2 AFH 400 B 1 
HETATM 9 N N3 AFH . . . D 2 6.902 17.397 7.152 1 46.9 ? N3 AFH 400 B 1 
HETATM 10 C C4 AFH . . . D 2 7.318 16.67 6.026 1 48.04 ? C4 AFH 400 B 1 
HETATM 11 C C1D AFH . . . D 2 5.359 16.71 4.466 1 47.05 ? C1D AFH 400 B 1 
HETATM 12 C C2D AFH . . . D 2 5.341 17.577 3.223 1 46.65 ? C2D AFH 400 B 1 
HETATM 13 O O2' AFH . . . D 2 5.761 18.92 3.44 1 45.71 ? O2' AFH 400 B 1 
HETATM 14 C C3D AFH . . . D 2 3.927 17.399 2.725 1 46.24 ? C3D AFH 400 B 1 
HETATM 15 C C4D AFH . . . D 2 3.658 15.987 3.063 1 46.26 ? C4D AFH 400 B 1 
HETATM 16 O O4D AFH . . . D 2 4.554 15.584 4.13 1 46.87 ? O4D AFH 400 B 1 
HETATM 17 O O3D AFH . . . D 2 2.97 18.25 3.387 1 47.02 ? O3D AFH 400 B 1 
HETATM 18 C C5D AFH . . . D 2 3.789 15.199 1.758 1 45.06 ? C5D AFH 400 B 1 
HETATM 19 O O5D AFH . . . D 2 2.522 15.26 0.977 1 46.01 ? O5D AFH 400 B 1 
HETATM 20 P PA AFH . . . D 2 1.43 14.128 0.828 1 45.38 ? PA AFH 400 B 1 
HETATM 21 O O1A AFH . . . D 2 0.676 14.295 -0.398 1 45.17 ? O1A AFH 400 B 1 
HETATM 22 O O2A AFH . . . D 2 0.5 14.114 1.97 1 47.73 ? O2A AFH 400 B 1 
HETATM 23 O O3A AFH . . . D 2 2.313 12.895 0.697 1 46.4 ? O3A AFH 400 B 1 
HETATM 24 P PB AFH . . . D 2 2.277 11.392 0.912 1 44.44 ? PB AFH 400 B 1 
HETATM 25 O O1B AFH . . . D 2 2.74 10.656 -0.318 1 47.4 ? O1B AFH 400 B 1 
HETATM 26 O O2B AFH . . . D 2 3.151 11.153 2.017 1 45.74 ? O2B AFH 400 B 1 
HETATM 27 O O3B AFH . . . D 2 0.783 11.047 1.431 1 42.61 ? O3B AFH 400 B 1 
HETATM 28 C C1' AFH . . . D 2 0.244 9.947 1.028 1 41.5 ? C1' AFH 400 B 1 
HETATM 29 C C2' AFH . . . D 2 -0.475 9.153 2.137 1 40.85 ? C2' AFH 400 B 1 
HETATM 30 C C3' AFH . . . D 2 -1.097 7.887 1.512 1 39.98 ? C3' AFH 400 B 1 
HETATM 31 C C4' AFH . . . D 2 -2.089 8.358 0.437 1 41.36 ? C4' AFH 400 B 1 
HETATM 32 C C5' AFH . . . D 2 -1.362 9.15 -0.672 1 40.34 ? C5' AFH 400 B 1 
HETATM 33 C C6' AFH . . . D 2 -2.303 9.679 -1.817 1 41.72 ? C6' AFH 400 B 1 
HETATM 34 C C7' AFH . . . D 2 -1.589 10.431 -2.961 1 41.59 ? C7' AFH 400 B 1 
HETATM 35 F F AFH . . . D 2 0.444 8.788 3.15 1 36.03 ? F AFH 400 B 1 
HETATM 36 O O3' AFH . . . D 2 -1.778 7.142 2.514 1 40.49 ? O3' AFH 400 B 1 
HETATM 37 O O4' AFH . . . D 2 -2.719 7.257 -0.197 1 41.8 ? O4' AFH 400 B 1 
HETATM 38 O O5' AFH . . . D 2 -0.657 10.323 -0.065 1 40.82 ? O5' AFH 400 B 1 
HETATM 39 O O6' AFH . . . D 2 -3.286 10.546 -1.244 1 39.01 ? O6' AFH 400 B 1 
HETATM 40 O O7' AFH . . . D 2 -0.17 10.547 -2.853 1 44.38 ? O7' AFH 400 B 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           262 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           40 
#