data_2H2A
#
_model_server_result.job_id            puNw7onURaxOXqI6hhjPLw 
_model_server_result.datetime_utc      '2024-11-07 21:33:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2h2a 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":1303}' 
#
_entry.id    2H2A 
#
_exptl.entry_id    2H2A 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2H2A 
_cell.length_a            62.303 
_cell.length_b            83.649 
_cell.length_c            99.113 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2H2A 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ILE 72 A ILE 72 1_555 A N CSX 73 A CSX 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? 
covale ? covale2 A C CSX 73 A CSX 73 1_555 A N ASP 74 A ASP 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? 
covale ? covale3 B C ILE 72 B ILE 72 1_555 B N CSX 73 B CSX 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
covale ? covale4 B C CSX 73 B CSX 73 1_555 B N ASP 74 B ASP 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? 
metalc ? metalc1 A OD1 ASP 71 A ASP 71 1_555 C CA CA . A CA 1304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.636 ? 
metalc ? metalc2 A OD2 ASP 71 A ASP 71 1_555 C CA CA . A CA 1304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.703 ? 
metalc ? metalc3 E O2 GOL . A GOL 1303 1_555 C CA CA . A CA 1304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.646 ? 
metalc ? metalc4 E O3 GOL . A GOL 1303 1_555 C CA CA . A CA 1304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.478 ? 
metalc ? metalc5 C CA CA . A CA 1304 1_555 G O HOH . A HOH 1305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.563 ? 
metalc ? metalc6 C CA CA . A CA 1304 1_555 G O HOH . A HOH 1388 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.605 ? 
metalc ? metalc7 C CA CA . A CA 1304 1_555 G O HOH . A HOH 1389 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? 
metalc ? metalc8 C CA CA . A CA 1304 1_555 G O HOH . A HOH 1390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 218 n n 
C1 C2 GOL sing 219 n n 
C1 H11 GOL sing 220 n n 
C1 H12 GOL sing 221 n n 
O1 HO1 GOL sing 222 n n 
C2 O2 GOL sing 223 n n 
C2 C3 GOL sing 224 n n 
C2 H2 GOL sing 225 n n 
O2 HO2 GOL sing 226 n n 
C3 O3 GOL sing 227 n n 
C3 H31 GOL sing 228 n n 
C3 H32 GOL sing 229 n n 
O3 HO3 GOL sing 230 n n 
#
_atom_sites.entry_id                     2H2A 
_atom_sites.fract_transf_matrix[1][1]    0.016051 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011955 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010089 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CA A 1 1304 1304 CA CA . 
D 3 DND A 1 1301 1301 DND DND . 
E 4 GOL A 1 1303 1303 GOL GOL . 
F 3 DND B 1 1302 1302 DND DND . 
G 5 HOH A 1 1305 2 HOH HOH . 
G 5 HOH A 2 1306 3 HOH HOH . 
G 5 HOH A 3 1307 4 HOH HOH . 
G 5 HOH A 4 1308 5 HOH HOH . 
G 5 HOH A 5 1309 6 HOH HOH . 
G 5 HOH A 6 1310 8 HOH HOH . 
G 5 HOH A 7 1311 11 HOH HOH . 
G 5 HOH A 8 1312 12 HOH HOH . 
G 5 HOH A 9 1313 16 HOH HOH . 
G 5 HOH A 10 1314 17 HOH HOH . 
G 5 HOH A 11 1315 18 HOH HOH . 
G 5 HOH A 12 1316 23 HOH HOH . 
G 5 HOH A 13 1317 24 HOH HOH . 
G 5 HOH A 14 1318 26 HOH HOH . 
G 5 HOH A 15 1319 27 HOH HOH . 
G 5 HOH A 16 1320 30 HOH HOH . 
G 5 HOH A 17 1321 33 HOH HOH . 
G 5 HOH A 18 1322 35 HOH HOH . 
G 5 HOH A 19 1323 36 HOH HOH . 
G 5 HOH A 20 1324 40 HOH HOH . 
G 5 HOH A 21 1325 41 HOH HOH . 
G 5 HOH A 22 1326 42 HOH HOH . 
G 5 HOH A 23 1327 44 HOH HOH . 
G 5 HOH A 24 1328 45 HOH HOH . 
G 5 HOH A 25 1329 46 HOH HOH . 
G 5 HOH A 26 1330 47 HOH HOH . 
G 5 HOH A 27 1331 48 HOH HOH . 
G 5 HOH A 28 1332 51 HOH HOH . 
G 5 HOH A 29 1333 53 HOH HOH . 
G 5 HOH A 30 1334 89 HOH HOH . 
G 5 HOH A 31 1335 90 HOH HOH . 
G 5 HOH A 32 1336 92 HOH HOH . 
G 5 HOH A 33 1337 95 HOH HOH . 
G 5 HOH A 34 1338 101 HOH HOH . 
G 5 HOH A 35 1339 120 HOH HOH . 
G 5 HOH A 36 1340 121 HOH HOH . 
G 5 HOH A 37 1341 122 HOH HOH . 
G 5 HOH A 38 1342 123 HOH HOH . 
G 5 HOH A 39 1343 124 HOH HOH . 
G 5 HOH A 40 1344 125 HOH HOH . 
G 5 HOH A 41 1345 126 HOH HOH . 
G 5 HOH A 42 1346 127 HOH HOH . 
G 5 HOH A 43 1347 128 HOH HOH . 
G 5 HOH A 44 1348 129 HOH HOH . 
G 5 HOH A 45 1349 130 HOH HOH . 
G 5 HOH A 46 1350 131 HOH HOH . 
G 5 HOH A 47 1351 132 HOH HOH . 
G 5 HOH A 48 1352 133 HOH HOH . 
G 5 HOH A 49 1353 135 HOH HOH . 
G 5 HOH A 50 1354 136 HOH HOH . 
G 5 HOH A 51 1355 137 HOH HOH . 
G 5 HOH A 52 1356 138 HOH HOH . 
G 5 HOH A 53 1357 139 HOH HOH . 
G 5 HOH A 54 1358 140 HOH HOH . 
G 5 HOH A 55 1359 141 HOH HOH . 
G 5 HOH A 56 1360 143 HOH HOH . 
G 5 HOH A 57 1361 144 HOH HOH . 
G 5 HOH A 58 1362 145 HOH HOH . 
G 5 HOH A 59 1363 146 HOH HOH . 
G 5 HOH A 60 1364 147 HOH HOH . 
G 5 HOH A 61 1365 148 HOH HOH . 
G 5 HOH A 62 1366 149 HOH HOH . 
G 5 HOH A 63 1367 150 HOH HOH . 
G 5 HOH A 64 1368 151 HOH HOH . 
G 5 HOH A 65 1369 152 HOH HOH . 
G 5 HOH A 66 1370 153 HOH HOH . 
G 5 HOH A 67 1371 155 HOH HOH . 
G 5 HOH A 68 1372 156 HOH HOH . 
G 5 HOH A 69 1373 157 HOH HOH . 
G 5 HOH A 70 1374 159 HOH HOH . 
G 5 HOH A 71 1375 160 HOH HOH . 
G 5 HOH A 72 1376 161 HOH HOH . 
G 5 HOH A 73 1377 162 HOH HOH . 
G 5 HOH A 74 1378 198 HOH HOH . 
G 5 HOH A 75 1379 201 HOH HOH . 
G 5 HOH A 76 1380 202 HOH HOH . 
G 5 HOH A 77 1381 203 HOH HOH . 
G 5 HOH A 78 1382 204 HOH HOH . 
G 5 HOH A 79 1383 205 HOH HOH . 
G 5 HOH A 80 1384 206 HOH HOH . 
G 5 HOH A 81 1385 207 HOH HOH . 
G 5 HOH A 82 1386 208 HOH HOH . 
G 5 HOH A 83 1387 301 HOH HOH . 
G 5 HOH A 84 1388 304 HOH HOH . 
G 5 HOH A 85 1389 305 HOH HOH . 
G 5 HOH A 86 1390 306 HOH HOH . 
G 5 HOH A 87 1391 309 HOH HOH . 
G 5 HOH A 88 1392 311 HOH HOH . 
G 5 HOH A 89 1393 312 HOH HOH . 
H 5 HOH B 1 1303 1 HOH HOH . 
H 5 HOH B 2 1304 7 HOH HOH . 
H 5 HOH B 3 1305 9 HOH HOH . 
H 5 HOH B 4 1306 10 HOH HOH . 
H 5 HOH B 5 1307 13 HOH HOH . 
H 5 HOH B 6 1308 14 HOH HOH . 
H 5 HOH B 7 1309 15 HOH HOH . 
H 5 HOH B 8 1310 19 HOH HOH . 
H 5 HOH B 9 1311 20 HOH HOH . 
H 5 HOH B 10 1312 21 HOH HOH . 
H 5 HOH B 11 1313 22 HOH HOH . 
H 5 HOH B 12 1314 25 HOH HOH . 
H 5 HOH B 13 1315 28 HOH HOH . 
H 5 HOH B 14 1316 29 HOH HOH . 
H 5 HOH B 15 1317 31 HOH HOH . 
H 5 HOH B 16 1318 32 HOH HOH . 
H 5 HOH B 17 1319 37 HOH HOH . 
H 5 HOH B 18 1320 38 HOH HOH . 
H 5 HOH B 19 1321 39 HOH HOH . 
H 5 HOH B 20 1322 43 HOH HOH . 
H 5 HOH B 21 1323 49 HOH HOH . 
H 5 HOH B 22 1324 50 HOH HOH . 
H 5 HOH B 23 1325 52 HOH HOH . 
H 5 HOH B 24 1326 86 HOH HOH . 
H 5 HOH B 25 1327 87 HOH HOH . 
H 5 HOH B 26 1328 91 HOH HOH . 
H 5 HOH B 27 1329 93 HOH HOH . 
H 5 HOH B 28 1330 94 HOH HOH . 
H 5 HOH B 29 1331 102 HOH HOH . 
H 5 HOH B 30 1332 105 HOH HOH . 
H 5 HOH B 31 1333 108 HOH HOH . 
H 5 HOH B 32 1334 109 HOH HOH . 
H 5 HOH B 33 1335 111 HOH HOH . 
H 5 HOH B 34 1336 112 HOH HOH . 
H 5 HOH B 35 1337 114 HOH HOH . 
H 5 HOH B 36 1338 115 HOH HOH . 
H 5 HOH B 37 1339 117 HOH HOH . 
H 5 HOH B 38 1340 118 HOH HOH . 
H 5 HOH B 39 1341 119 HOH HOH . 
H 5 HOH B 40 1342 116 HOH HOH . 
H 5 HOH B 41 1343 154 HOH HOH . 
H 5 HOH B 42 1344 158 HOH HOH . 
H 5 HOH B 43 1345 163 HOH HOH . 
H 5 HOH B 44 1346 164 HOH HOH . 
H 5 HOH B 45 1347 165 HOH HOH . 
H 5 HOH B 46 1348 166 HOH HOH . 
H 5 HOH B 47 1349 167 HOH HOH . 
H 5 HOH B 48 1350 168 HOH HOH . 
H 5 HOH B 49 1351 169 HOH HOH . 
H 5 HOH B 50 1352 170 HOH HOH . 
H 5 HOH B 51 1353 171 HOH HOH . 
H 5 HOH B 52 1354 172 HOH HOH . 
H 5 HOH B 53 1355 173 HOH HOH . 
H 5 HOH B 54 1356 176 HOH HOH . 
H 5 HOH B 55 1357 177 HOH HOH . 
H 5 HOH B 56 1358 178 HOH HOH . 
H 5 HOH B 57 1359 179 HOH HOH . 
H 5 HOH B 58 1360 181 HOH HOH . 
H 5 HOH B 59 1361 182 HOH HOH . 
H 5 HOH B 60 1362 183 HOH HOH . 
H 5 HOH B 61 1363 184 HOH HOH . 
H 5 HOH B 62 1364 185 HOH HOH . 
H 5 HOH B 63 1365 186 HOH HOH . 
H 5 HOH B 64 1366 187 HOH HOH . 
H 5 HOH B 65 1367 188 HOH HOH . 
H 5 HOH B 66 1368 189 HOH HOH . 
H 5 HOH B 67 1369 190 HOH HOH . 
H 5 HOH B 68 1370 191 HOH HOH . 
H 5 HOH B 69 1371 192 HOH HOH . 
H 5 HOH B 70 1372 193 HOH HOH . 
H 5 HOH B 71 1373 194 HOH HOH . 
H 5 HOH B 72 1374 195 HOH HOH . 
H 5 HOH B 73 1375 196 HOH HOH . 
H 5 HOH B 74 1376 197 HOH HOH . 
H 5 HOH B 75 1377 199 HOH HOH . 
H 5 HOH B 76 1378 209 HOH HOH . 
H 5 HOH B 77 1379 210 HOH HOH . 
H 5 HOH B 78 1380 211 HOH HOH . 
H 5 HOH B 79 1381 212 HOH HOH . 
H 5 HOH B 80 1382 213 HOH HOH . 
H 5 HOH B 81 1383 313 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . E 4 -4.044 36.113 0.472 1 39.54 ? C1 GOL 1303 A 1 
HETATM 2 O O1 GOL . . . E 4 -5.199 35.524 1.011 1 38.22 ? O1 GOL 1303 A 1 
HETATM 3 C C2 GOL . . . E 4 -2.845 35.93 1.426 1 41.97 ? C2 GOL 1303 A 1 
HETATM 4 O O2 GOL . . . E 4 -1.648 35.647 0.707 1 42.13 ? O2 GOL 1303 A 1 
HETATM 5 C C3 GOL . . . E 4 -3.091 34.868 2.503 1 41.27 ? C3 GOL 1303 A 1 
HETATM 6 O O3 GOL . . . E 4 -2.853 33.553 2.029 1 39.43 ? O3 GOL 1303 A 1 
#
_model_server_stats.io_time_ms              53 
_model_server_stats.parse_time_ms           50 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           337 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#