data_2H34 # _model_server_result.job_id Ml10UPchbODIXxnMJ-C8ng _model_server_result.datetime_utc '2024-11-05 00:37:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2h34 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":290}' # _entry.id 2H34 # _exptl.entry_id 2H34 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2H34 _cell.length_a 77.078 _cell.length_b 77.078 _cell.length_c 221.024 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2H34 _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D 1 1 B,E 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 46 A GLY 26 1_555 A N MSE 47 A MSE 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale2 A C MSE 47 A MSE 27 1_555 A N GLY 48 A GLY 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale3 A C LEU 66 A LEU 46 1_555 A N MSE 67 A MSE 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 A C MSE 67 A MSE 47 1_555 A N SER 68 A SER 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.281 ? covale ? covale5 A C ARG 80 A ARG 60 1_555 A N MSE 81 A MSE 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale6 A C MSE 81 A MSE 61 1_555 A N GLN 82 A GLN 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale7 A C ASP 112 A ASP 92 1_555 A N MSE 113 A MSE 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale8 A C MSE 113 A MSE 93 1_555 A N ARG 114 A ARG 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale9 A C ALA 123 A ALA 103 1_555 A N MSE 124 A MSE 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale10 A C MSE 124 A MSE 104 1_555 A N LEU 125 A LEU 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale11 A C TYR 201 A TYR 181 1_555 A N MSE 202 A MSE 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale12 A C MSE 202 A MSE 182 1_555 A N ALA 203 A ALA 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale13 A C VAL 242 A VAL 222 1_555 A N MSE 243 A MSE 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale14 A C MSE 243 A MSE 223 1_555 A N GLY 244 A GLY 224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale15 A C GLY 272 A GLY 252 1_555 A N MSE 273 A MSE 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale16 A C MSE 273 A MSE 253 1_555 A N ALA 274 A ALA 254 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale17 B C GLY 46 B GLY 26 1_555 B N MSE 47 B MSE 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale18 B C MSE 47 B MSE 27 1_555 B N GLY 48 B GLY 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale19 B C LEU 66 B LEU 46 1_555 B N MSE 67 B MSE 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale20 B C MSE 67 B MSE 47 1_555 B N SER 68 B SER 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale21 B C ARG 80 B ARG 60 1_555 B N MSE 81 B MSE 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale22 B C MSE 81 B MSE 61 1_555 B N GLN 82 B GLN 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale23 B C ASP 112 B ASP 92 1_555 B N MSE 113 B MSE 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale24 B C MSE 113 B MSE 93 1_555 B N ARG 114 B ARG 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale25 B C ALA 123 B ALA 103 1_555 B N MSE 124 B MSE 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale26 B C MSE 124 B MSE 104 1_555 B N LEU 125 B LEU 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale27 B C TYR 201 B TYR 181 1_555 B N MSE 202 B MSE 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale28 B C MSE 202 B MSE 182 1_555 B N ALA 203 B ALA 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale29 B C VAL 242 B VAL 222 1_555 B N MSE 243 B MSE 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale30 B C MSE 243 B MSE 223 1_555 B N GLY 244 B GLY 224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale31 B C GLY 272 B GLY 252 1_555 B N MSE 273 B MSE 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale32 B C MSE 273 B MSE 253 1_555 B N ALA 274 B ALA 254 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? metalc ? metalc1 B OD2 ASP 217 B ASP 197 1_555 E NA NA . B NA 290 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.906 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2H34 _atom_sites.fract_transf_matrix[1][1] 0.01297 _atom_sites.fract_transf_matrix[1][2] 0.00749 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01498 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00452 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BR A 1 300 300 BR BR . D 3 NA A 1 301 2 NA NA . E 3 NA B 1 290 1 NA NA . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x 39.218 _atom_site.Cartn_y 1.191 _atom_site.Cartn_z 13.737 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 59.42 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 290 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #