data_2H35 # _model_server_result.job_id wANn8wJU2WiJzHpspJCE2w _model_server_result.datetime_utc '2024-12-26 21:36:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2h35 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":142}' # _entry.id 2H35 # _exptl.entry_id 2H35 _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 616.487 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PROTOPORPHYRIN IX CONTAINING FE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N # _chem_comp.formula 'C34 H32 Fe N4 O4' _chem_comp.formula_weight 616.487 _chem_comp.id HEM _chem_comp.mon_nstd_flag . _chem_comp.name 'PROTOPORPHYRIN IX CONTAINING FE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEME # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CHA C1A HEM sing 129 n n CHA C4D HEM doub 130 n n CHA HHA HEM sing 131 n n CHB C4A HEM sing 132 n n CHB C1B HEM doub 133 n n CHB HHB HEM sing 134 n n CHC C4B HEM sing 135 n n CHC C1C HEM doub 136 n n CHC HHC HEM sing 137 n n CHD C4C HEM doub 138 n n CHD C1D HEM sing 139 n n CHD HHD HEM sing 140 n n C1A C2A HEM doub 141 n y C1A NA HEM sing 142 n y C2A C3A HEM sing 143 n y C2A CAA HEM sing 144 n n C3A C4A HEM doub 145 n y C3A CMA HEM sing 146 n n C4A NA HEM sing 147 n y CMA HMA HEM sing 148 n n CMA HMAA HEM sing 149 n n CMA HMAB HEM sing 150 n n CAA CBA HEM sing 151 n n CAA HAA HEM sing 152 n n CAA HAAA HEM sing 153 n n CBA CGA HEM sing 154 n n CBA HBA HEM sing 155 n n CBA HBAA HEM sing 156 n n CGA O1A HEM doub 157 n n CGA O2A HEM sing 158 n n C1B C2B HEM sing 159 n n C1B NB HEM sing 160 n n C2B C3B HEM doub 161 n n C2B CMB HEM sing 162 n n C3B C4B HEM sing 163 n n C3B CAB HEM sing 164 n n C4B NB HEM doub 165 n n CMB HMB HEM sing 166 n n CMB HMBA HEM sing 167 n n CMB HMBB HEM sing 168 n n CAB CBB HEM doub 169 n n CAB HAB HEM sing 170 n n CBB HBB HEM sing 171 n n CBB HBBA HEM sing 172 n n C1C C2C HEM sing 173 n y C1C NC HEM sing 174 n y C2C C3C HEM doub 175 n y C2C CMC HEM sing 176 n n C3C C4C HEM sing 177 n y C3C CAC HEM sing 178 n n C4C NC HEM sing 179 n y CMC HMC HEM sing 180 n n CMC HMCA HEM sing 181 n n CMC HMCB HEM sing 182 n n CAC CBC HEM doub 183 n n CAC HAC HEM sing 184 n n CBC HBC HEM sing 185 n n CBC HBCA HEM sing 186 n n C1D C2D HEM sing 187 n n C1D ND HEM doub 188 n n C2D C3D HEM doub 189 n n C2D CMD HEM sing 190 n n C3D C4D HEM sing 191 n n C3D CAD HEM sing 192 n n C4D ND HEM sing 193 n n CMD HMD HEM sing 194 n n CMD HMDA HEM sing 195 n n CMD HMDB HEM sing 196 n n CAD CBD HEM sing 197 n n CAD HAD HEM sing 198 n n CAD HADA HEM sing 199 n n CBD CGD HEM sing 200 n n CBD HBD HEM sing 201 n n CBD HBDA HEM sing 202 n n CGD O1D HEM doub 203 n n CGD O2D HEM sing 204 n n O2A H2A HEM sing 205 n n O2D H2D HEM sing 206 n n FE NA HEM sing 207 n n FE NB HEM sing 208 n n FE NC HEM sing 209 n n FE ND HEM sing 210 n n # _atom_sites.entry_id 2H35 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HEM A 1 142 142 HEM HEC . F 3 HEM B 1 147 147 HEM HEC . G 3 HEM C 1 142 142 HEM HEC . H 3 HEM D 1 147 147 HEM HEC . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CHA HEM . . . E 3 -17.747 14.078 8.252 1 0 ? CHA HEM 142 A 1 HETATM 2 C CHB HEM . . . E 3 -17.695 13.499 3.503 1 0 ? CHB HEM 142 A 1 HETATM 3 C CHC HEM . . . E 3 -15.047 9.543 4.013 1 0 ? CHC HEM 142 A 1 HETATM 4 C CHD HEM . . . E 3 -15.112 10.112 8.763 1 0 ? CHD HEM 142 A 1 HETATM 5 C C1A HEM . . . E 3 -17.952 14.269 6.91 1 0 ? C1A HEM 142 A 1 HETATM 6 C C2A HEM . . . E 3 -18.715 15.358 6.359 1 0 ? C2A HEM 142 A 1 HETATM 7 C C3A HEM . . . E 3 -18.712 15.193 5.017 1 0 ? C3A HEM 142 A 1 HETATM 8 C C4A HEM . . . E 3 -17.935 14.005 4.754 1 0 ? C4A HEM 142 A 1 HETATM 9 C CMA HEM . . . E 3 -19.405 16.06 4.015 1 0 ? CMA HEM 142 A 1 HETATM 10 C CAA HEM . . . E 3 -19.382 16.452 7.12 1 0 ? CAA HEM 142 A 1 HETATM 11 C CBA HEM . . . E 3 -18.382 17.472 7.668 1 0 ? CBA HEM 142 A 1 HETATM 12 C CGA HEM . . . E 3 -19.096 18.415 8.64 1 0 ? CGA HEM 142 A 1 HETATM 13 O O1A HEM . . . E 3 -19.195 19.59 8.329 1 0 ? O1A HEM 142 A 1 HETATM 14 O O2A HEM . . . E 3 -19.529 17.944 9.679 1 0 ? O2A HEM 142 A 1 HETATM 15 C C1B HEM . . . E 3 -16.968 12.369 3.231 1 0 ? C1B HEM 142 A 1 HETATM 16 C C2B HEM . . . E 3 -16.742 11.862 1.902 1 0 ? C2B HEM 142 A 1 HETATM 17 C C3B HEM . . . E 3 -15.99 10.743 2.039 1 0 ? C3B HEM 142 A 1 HETATM 18 C C4B HEM . . . E 3 -15.766 10.574 3.458 1 0 ? C4B HEM 142 A 1 HETATM 19 C CMB HEM . . . E 3 -17.253 12.451 0.631 1 0 ? CMB HEM 142 A 1 HETATM 20 C CAB HEM . . . E 3 -15.501 9.852 0.94 1 0 ? CAB HEM 142 A 1 HETATM 21 C CBB HEM . . . E 3 -15.023 10.607 -0.309 1 0 ? CBB HEM 142 A 1 HETATM 22 C C1C HEM . . . E 3 -14.834 9.363 5.354 1 0 ? C1C HEM 142 A 1 HETATM 23 C C2C HEM . . . E 3 -14.08 8.268 5.907 1 0 ? C2C HEM 142 A 1 HETATM 24 C C3C HEM . . . E 3 -14.1 8.425 7.249 1 0 ? C3C HEM 142 A 1 HETATM 25 C C4C HEM . . . E 3 -14.865 9.619 7.509 1 0 ? C4C HEM 142 A 1 HETATM 26 C CMC HEM . . . E 3 -13.401 7.181 5.145 1 0 ? CMC HEM 142 A 1 HETATM 27 C CAC HEM . . . E 3 -13.458 7.541 8.262 1 0 ? CAC HEM 142 A 1 HETATM 28 C CBC HEM . . . E 3 -14.176 6.2 8.428 1 0 ? CBC HEM 142 A 1 HETATM 29 C C1D HEM . . . E 3 -15.836 11.248 9.038 1 0 ? C1D HEM 142 A 1 HETATM 30 C C2D HEM . . . E 3 -16.087 11.75 10.367 1 0 ? C2D HEM 142 A 1 HETATM 31 C C3D HEM . . . E 3 -16.841 12.864 10.221 1 0 ? C3D HEM 142 A 1 HETATM 32 C C4D HEM . . . E 3 -17.036 13.044 8.804 1 0 ? C4D HEM 142 A 1 HETATM 33 C CMD HEM . . . E 3 -15.592 11.176 11.652 1 0 ? CMD HEM 142 A 1 HETATM 34 C CAD HEM . . . E 3 -17.393 13.717 11.314 1 0 ? CAD HEM 142 A 1 HETATM 35 C CBD HEM . . . E 3 -16.555 14.971 11.558 1 0 ? CBD HEM 142 A 1 HETATM 36 C CGD HEM . . . E 3 -17.306 15.912 12.501 1 0 ? CGD HEM 142 A 1 HETATM 37 O O1D HEM . . . E 3 -17.61 17.018 12.085 1 0 ? O1D HEM 142 A 1 HETATM 38 O O2D HEM . . . E 3 -17.567 15.511 13.623 1 0 ? O2D HEM 142 A 1 HETATM 39 N NA HEM . . . E 3 -17.47 13.437 5.922 1 0 ? NA HEM 142 A 1 HETATM 40 N NB HEM . . . E 3 -16.37 11.578 4.187 1 0 ? NB HEM 142 A 1 HETATM 41 N NC HEM . . . E 3 -15.314 10.195 6.341 1 0 ? NC HEM 142 A 1 HETATM 42 N ND HEM . . . E 3 -16.419 12.048 8.077 1 0 ? ND HEM 142 A 1 HETATM 43 FE FE HEM . . . E 3 -16.38 11.823 6.131 1 0 ? FE HEM 142 A 1 HETATM 44 H HHB HEM . . . E 3 -18.106 14.039 2.655 1 0 ? HHB HEM 142 A 1 HETATM 45 H HHC HEM . . . E 3 -14.616 8.808 3.338 1 0 ? HHC HEM 142 A 1 HETATM 46 H HHD HEM . . . E 3 -14.711 9.553 9.606 1 0 ? HHD HEM 142 A 1 HETATM 47 H HMA HEM . . . E 3 -20.449 16.149 4.276 1 0 ? HMA HEM 142 A 1 HETATM 48 H HMAA HEM . . . E 3 -19.322 15.621 3.036 1 0 ? HMAA HEM 142 A 1 HETATM 49 H HMAB HEM . . . E 3 -18.95 17.039 4.01 1 0 ? HMAB HEM 142 A 1 HETATM 50 H HAA HEM . . . E 3 -19.929 16.021 7.946 1 0 ? HAA HEM 142 A 1 HETATM 51 H HAAA HEM . . . E 3 -20.077 16.96 6.467 1 0 ? HAAA HEM 142 A 1 HETATM 52 H HBA HEM . . . E 3 -17.967 18.045 6.852 1 0 ? HBA HEM 142 A 1 HETATM 53 H HBAA HEM . . . E 3 -17.587 16.955 8.186 1 0 ? HBAA HEM 142 A 1 HETATM 54 H HMB HEM . . . E 3 -17.293 11.69 -0.128 1 0 ? HMB HEM 142 A 1 HETATM 55 H HMBA HEM . . . E 3 -16.594 13.245 0.312 1 0 ? HMBA HEM 142 A 1 HETATM 56 H HMBB HEM . . . E 3 -18.244 12.847 0.79 1 0 ? HMBB HEM 142 A 1 HETATM 57 H HAB HEM . . . E 3 -14.704 9.225 1.305 1 0 ? HAB HEM 142 A 1 HETATM 58 H HBB HEM . . . E 3 -14.915 11.657 -0.083 1 0 ? HBB HEM 142 A 1 HETATM 59 H HBBA HEM . . . E 3 -15.746 10.48 -1.1 1 0 ? HBBA HEM 142 A 1 HETATM 60 H HMC HEM . . . E 3 -12.761 7.618 4.392 1 0 ? HMC HEM 142 A 1 HETATM 61 H HMCA HEM . . . E 3 -14.144 6.558 4.668 1 0 ? HMCA HEM 142 A 1 HETATM 62 H HMCB HEM . . . E 3 -12.808 6.584 5.821 1 0 ? HMCB HEM 142 A 1 HETATM 63 H HAC HEM . . . E 3 -12.428 7.368 7.989 1 0 ? HAC HEM 142 A 1 HETATM 64 H HBC HEM . . . E 3 -14.172 5.67 7.487 1 0 ? HBC HEM 142 A 1 HETATM 65 H HBCA HEM . . . E 3 -15.196 6.374 8.739 1 0 ? HBCA HEM 142 A 1 HETATM 66 H HMD HEM . . . E 3 -15.49 11.965 12.383 1 0 ? HMD HEM 142 A 1 HETATM 67 H HMDA HEM . . . E 3 -14.631 10.711 11.494 1 0 ? HMDA HEM 142 A 1 HETATM 68 H HMDB HEM . . . E 3 -16.295 10.439 12.011 1 0 ? HMDB HEM 142 A 1 HETATM 69 H HAD HEM . . . E 3 -17.429 13.139 12.224 1 0 ? HAD HEM 142 A 1 HETATM 70 H HADA HEM . . . E 3 -18.398 14.014 11.052 1 0 ? HADA HEM 142 A 1 HETATM 71 H HBD HEM . . . E 3 -16.375 15.472 10.618 1 0 ? HBD HEM 142 A 1 HETATM 72 H HBDA HEM . . . E 3 -15.612 14.693 12.003 1 0 ? HBDA HEM 142 A 1 HETATM 73 H HHA HEM . . . E 3 -18.181 14.81 8.933 1 0 ? HHA HEM 142 A 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 579 _model_server_stats.query_time_ms 6086 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 73 #