data_2H35 # _model_server_result.job_id lXYo-Alj3Iy3K_nHWj19ew _model_server_result.datetime_utc '2024-12-26 21:10:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2h35 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":147}' # _entry.id 2H35 # _exptl.entry_id 2H35 _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 616.487 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PROTOPORPHYRIN IX CONTAINING FE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N # _chem_comp.formula 'C34 H32 Fe N4 O4' _chem_comp.formula_weight 616.487 _chem_comp.id HEM _chem_comp.mon_nstd_flag . _chem_comp.name 'PROTOPORPHYRIN IX CONTAINING FE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEME # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CHA C1A HEM sing 129 n n CHA C4D HEM doub 130 n n CHA HHA HEM sing 131 n n CHB C4A HEM sing 132 n n CHB C1B HEM doub 133 n n CHB HHB HEM sing 134 n n CHC C4B HEM sing 135 n n CHC C1C HEM doub 136 n n CHC HHC HEM sing 137 n n CHD C4C HEM doub 138 n n CHD C1D HEM sing 139 n n CHD HHD HEM sing 140 n n C1A C2A HEM doub 141 n y C1A NA HEM sing 142 n y C2A C3A HEM sing 143 n y C2A CAA HEM sing 144 n n C3A C4A HEM doub 145 n y C3A CMA HEM sing 146 n n C4A NA HEM sing 147 n y CMA HMA HEM sing 148 n n CMA HMAA HEM sing 149 n n CMA HMAB HEM sing 150 n n CAA CBA HEM sing 151 n n CAA HAA HEM sing 152 n n CAA HAAA HEM sing 153 n n CBA CGA HEM sing 154 n n CBA HBA HEM sing 155 n n CBA HBAA HEM sing 156 n n CGA O1A HEM doub 157 n n CGA O2A HEM sing 158 n n C1B C2B HEM sing 159 n n C1B NB HEM sing 160 n n C2B C3B HEM doub 161 n n C2B CMB HEM sing 162 n n C3B C4B HEM sing 163 n n C3B CAB HEM sing 164 n n C4B NB HEM doub 165 n n CMB HMB HEM sing 166 n n CMB HMBA HEM sing 167 n n CMB HMBB HEM sing 168 n n CAB CBB HEM doub 169 n n CAB HAB HEM sing 170 n n CBB HBB HEM sing 171 n n CBB HBBA HEM sing 172 n n C1C C2C HEM sing 173 n y C1C NC HEM sing 174 n y C2C C3C HEM doub 175 n y C2C CMC HEM sing 176 n n C3C C4C HEM sing 177 n y C3C CAC HEM sing 178 n n C4C NC HEM sing 179 n y CMC HMC HEM sing 180 n n CMC HMCA HEM sing 181 n n CMC HMCB HEM sing 182 n n CAC CBC HEM doub 183 n n CAC HAC HEM sing 184 n n CBC HBC HEM sing 185 n n CBC HBCA HEM sing 186 n n C1D C2D HEM sing 187 n n C1D ND HEM doub 188 n n C2D C3D HEM doub 189 n n C2D CMD HEM sing 190 n n C3D C4D HEM sing 191 n n C3D CAD HEM sing 192 n n C4D ND HEM sing 193 n n CMD HMD HEM sing 194 n n CMD HMDA HEM sing 195 n n CMD HMDB HEM sing 196 n n CAD CBD HEM sing 197 n n CAD HAD HEM sing 198 n n CAD HADA HEM sing 199 n n CBD CGD HEM sing 200 n n CBD HBD HEM sing 201 n n CBD HBDA HEM sing 202 n n CGD O1D HEM doub 203 n n CGD O2D HEM sing 204 n n O2A H2A HEM sing 205 n n O2D H2D HEM sing 206 n n FE NA HEM sing 207 n n FE NB HEM sing 208 n n FE NC HEM sing 209 n n FE ND HEM sing 210 n n # _atom_sites.entry_id 2H35 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HEM A 1 142 142 HEM HEC . F 3 HEM B 1 147 147 HEM HEC . G 3 HEM C 1 142 142 HEM HEC . H 3 HEM D 1 147 147 HEM HEC . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CHA HEM . . . F 3 -5.156 -17.13 -14.761 1 0 ? CHA HEM 147 B 1 HETATM 2 C CHB HEM . . . F 3 -7.116 -17.305 -10.397 1 0 ? CHB HEM 147 B 1 HETATM 3 C CHC HEM . . . F 3 -6.752 -12.544 -10.045 1 0 ? CHC HEM 147 B 1 HETATM 4 C CHD HEM . . . F 3 -4.725 -12.376 -14.373 1 0 ? CHD HEM 147 B 1 HETATM 5 C C1A HEM . . . F 3 -5.729 -17.59 -13.603 1 0 ? C1A HEM 147 B 1 HETATM 6 C C2A HEM . . . F 3 -6.02 -18.978 -13.339 1 0 ? C2A HEM 147 B 1 HETATM 7 C C3A HEM . . . F 3 -6.568 -19.028 -12.101 1 0 ? C3A HEM 147 B 1 HETATM 8 C C4A HEM . . . F 3 -6.612 -17.669 -11.619 1 0 ? C4A HEM 147 B 1 HETATM 9 C CMA HEM . . . F 3 -7.031 -20.245 -11.373 1 0 ? CMA HEM 147 B 1 HETATM 10 C CAA HEM . . . F 3 -5.778 -20.131 -14.256 1 0 ? CAA HEM 147 B 1 HETATM 11 C CBA HEM . . . F 3 -4.345 -20.658 -14.161 1 0 ? CBA HEM 147 B 1 HETATM 12 C CGA HEM . . . F 3 -4.089 -21.646 -15.301 1 0 ? CGA HEM 147 B 1 HETATM 13 O O1A HEM . . . F 3 -3.621 -22.737 -15.019 1 0 ? O1A HEM 147 B 1 HETATM 14 O O2A HEM . . . F 3 -4.365 -21.294 -16.436 1 0 ? O2A HEM 147 B 1 HETATM 15 C C1B HEM . . . F 3 -7.181 -16.02 -9.917 1 0 ? C1B HEM 147 B 1 HETATM 16 C C2B HEM . . . F 3 -7.729 -15.658 -8.632 1 0 ? C2B HEM 147 B 1 HETATM 17 C C3B HEM . . . F 3 -7.636 -14.311 -8.541 1 0 ? C3B HEM 147 B 1 HETATM 18 C C4B HEM . . . F 3 -7.024 -13.859 -9.764 1 0 ? C4B HEM 147 B 1 HETATM 19 C CMB HEM . . . F 3 -8.283 -16.585 -7.599 1 0 ? CMB HEM 147 B 1 HETATM 20 C CAB HEM . . . F 3 -8.096 -13.453 -7.409 1 0 ? CAB HEM 147 B 1 HETATM 21 C CBB HEM . . . F 3 -6.992 -12.569 -6.815 1 0 ? CBB HEM 147 B 1 HETATM 22 C C1C HEM . . . F 3 -6.167 -12.088 -11.196 1 0 ? C1C HEM 147 B 1 HETATM 23 C C2C HEM . . . F 3 -5.884 -10.699 -11.463 1 0 ? C2C HEM 147 B 1 HETATM 24 C C3C HEM . . . F 3 -5.307 -10.653 -12.683 1 0 ? C3C HEM 147 B 1 HETATM 25 C C4C HEM . . . F 3 -5.24 -12.012 -13.158 1 0 ? C4C HEM 147 B 1 HETATM 26 C CMC HEM . . . F 3 -6.178 -9.54 -10.572 1 0 ? CMC HEM 147 B 1 HETATM 27 C CAC HEM . . . F 3 -4.83 -9.436 -13.398 1 0 ? CAC HEM 147 B 1 HETATM 28 C CBC HEM . . . F 3 -5.971 -8.523 -13.855 1 0 ? CBC HEM 147 B 1 HETATM 29 C C1D HEM . . . F 3 -4.663 -13.66 -14.854 1 0 ? C1D HEM 147 B 1 HETATM 30 C C2D HEM . . . F 3 -4.129 -14.014 -16.146 1 0 ? C2D HEM 147 B 1 HETATM 31 C C3D HEM . . . F 3 -4.259 -15.356 -16.261 1 0 ? C3D HEM 147 B 1 HETATM 32 C C4D HEM . . . F 3 -4.866 -15.815 -15.034 1 0 ? C4D HEM 147 B 1 HETATM 33 C CMD HEM . . . F 3 -3.538 -13.084 -17.152 1 0 ? CMD HEM 147 B 1 HETATM 34 C CAD HEM . . . F 3 -3.871 -16.192 -17.435 1 0 ? CAD HEM 147 B 1 HETATM 35 C CBD HEM . . . F 3 -2.458 -16.765 -17.301 1 0 ? CBD HEM 147 B 1 HETATM 36 C CGD HEM . . . F 3 -2.248 -17.859 -18.35 1 0 ? CGD HEM 147 B 1 HETATM 37 O O1D HEM . . . F 3 -1.621 -18.853 -18.023 1 0 ? O1D HEM 147 B 1 HETATM 38 O O2D HEM . . . F 3 -2.72 -17.685 -19.462 1 0 ? O2D HEM 147 B 1 HETATM 39 N NA HEM . . . F 3 -6.095 -16.786 -12.543 1 0 ? NA HEM 147 B 1 HETATM 40 N NB HEM . . . F 3 -6.745 -14.91 -10.611 1 0 ? NB HEM 147 B 1 HETATM 41 N NC HEM . . . F 3 -5.769 -12.894 -12.24 1 0 ? NC HEM 147 B 1 HETATM 42 N ND HEM . . . F 3 -5.114 -14.769 -14.171 1 0 ? ND HEM 147 B 1 HETATM 43 FE FE HEM . . . F 3 -5.92 -14.841 -12.387 1 0 ? FE HEM 147 B 1 HETATM 44 H HHB HEM . . . F 3 -7.501 -18.099 -9.761 1 0 ? HHB HEM 147 B 1 HETATM 45 H HHC HEM . . . F 3 -7.027 -11.804 -9.294 1 0 ? HHC HEM 147 B 1 HETATM 46 H HHD HEM . . . F 3 -4.334 -11.582 -15.008 1 0 ? HHD HEM 147 B 1 HETATM 47 H HMA HEM . . . F 3 -6.769 -20.163 -10.329 1 0 ? HMA HEM 147 B 1 HETATM 48 H HMAA HEM . . . F 3 -6.557 -21.119 -11.792 1 0 ? HMAA HEM 147 B 1 HETATM 49 H HMAB HEM . . . F 3 -8.102 -20.337 -11.469 1 0 ? HMAB HEM 147 B 1 HETATM 50 H HAA HEM . . . F 3 -5.969 -19.818 -15.271 1 0 ? HAA HEM 147 B 1 HETATM 51 H HAAA HEM . . . F 3 -6.46 -20.929 -14.005 1 0 ? HAAA HEM 147 B 1 HETATM 52 H HBA HEM . . . F 3 -4.206 -21.158 -13.214 1 0 ? HBA HEM 147 B 1 HETATM 53 H HBAA HEM . . . F 3 -3.652 -19.833 -14.238 1 0 ? HBAA HEM 147 B 1 HETATM 54 H HMB HEM . . . F 3 -7.842 -17.563 -7.715 1 0 ? HMB HEM 147 B 1 HETATM 55 H HMBA HEM . . . F 3 -9.354 -16.658 -7.718 1 0 ? HMBA HEM 147 B 1 HETATM 56 H HMBB HEM . . . F 3 -8.055 -16.209 -6.615 1 0 ? HMBB HEM 147 B 1 HETATM 57 H HAB HEM . . . F 3 -8.527 -14.068 -6.635 1 0 ? HAB HEM 147 B 1 HETATM 58 H HBB HEM . . . F 3 -7.226 -11.534 -7.004 1 0 ? HBB HEM 147 B 1 HETATM 59 H HBBA HEM . . . F 3 -6.042 -12.81 -7.27 1 0 ? HBBA HEM 147 B 1 HETATM 60 H HMC HEM . . . F 3 -5.904 -9.786 -9.556 1 0 ? HMC HEM 147 B 1 HETATM 61 H HMCA HEM . . . F 3 -7.232 -9.311 -10.615 1 0 ? HMCA HEM 147 B 1 HETATM 62 H HMCB HEM . . . F 3 -5.61 -8.683 -10.899 1 0 ? HMCB HEM 147 B 1 HETATM 63 H HAC HEM . . . F 3 -4.159 -8.882 -12.76 1 0 ? HAC HEM 147 B 1 HETATM 64 H HBC HEM . . . F 3 -5.594 -7.806 -14.568 1 0 ? HBC HEM 147 B 1 HETATM 65 H HBCA HEM . . . F 3 -6.378 -8.002 -13.002 1 0 ? HBCA HEM 147 B 1 HETATM 66 H HMD HEM . . . F 3 -2.953 -12.33 -16.647 1 0 ? HMD HEM 147 B 1 HETATM 67 H HMDA HEM . . . F 3 -4.328 -12.611 -17.713 1 0 ? HMDA HEM 147 B 1 HETATM 68 H HMDB HEM . . . F 3 -2.9 -13.638 -17.825 1 0 ? HMDB HEM 147 B 1 HETATM 69 H HAD HEM . . . F 3 -3.917 -15.586 -18.327 1 0 ? HAD HEM 147 B 1 HETATM 70 H HADA HEM . . . F 3 -4.571 -17.007 -17.534 1 0 ? HADA HEM 147 B 1 HETATM 71 H HBD HEM . . . F 3 -2.331 -17.184 -16.314 1 0 ? HBD HEM 147 B 1 HETATM 72 H HBDA HEM . . . F 3 -1.735 -15.978 -17.454 1 0 ? HBDA HEM 147 B 1 HETATM 73 H HHA HEM . . . F 3 -4.904 -17.866 -15.521 1 0 ? HHA HEM 147 B 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 449 _model_server_stats.query_time_ms 4970 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 73 #