data_2H46 # _model_server_result.job_id jX10DYcjVxHotWEdEx-6zA _model_server_result.datetime_utc '2025-02-27 00:23:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2h46 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":169}' # _entry.id 2H46 # _exptl.entry_id 2H46 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2H46 _cell.length_a 80.783 _cell.length_b 80.783 _cell.length_c 75.216 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2H46 _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA,PQS octameric 8 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C 1 1,2 A,B,C 2 1,3,4,5,2,6,7,8 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 0 0 75.216 3 'crystal symmetry operation' 2_575 -x,-y+2,z -1 0 0 0 -1 0 0 0 1 0 161.566 0 4 'crystal symmetry operation' 3_665 -y+1,x+1,z 0 -1 0 1 0 0 0 0 1 80.783 80.783 0 5 'crystal symmetry operation' 4_465 y-1,-x+1,z 0 1 0 -1 0 0 0 0 1 -80.783 80.783 0 6 'crystal symmetry operation' 6_576 x,-y+2,-z+1 1 0 0 0 -1 0 0 0 -1 0 161.566 75.216 7 'crystal symmetry operation' 7_466 y-1,x+1,-z+1 0 1 0 1 0 0 0 0 -1 -80.783 80.783 75.216 8 'crystal symmetry operation' 8_666 -y+1,-x+1,-z+1 0 -1 0 -1 0 0 0 0 -1 80.783 80.783 75.216 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 116 n n C1 C2 GOL sing 117 n n C1 H11 GOL sing 118 n n C1 H12 GOL sing 119 n n O1 HO1 GOL sing 120 n n C2 O2 GOL sing 121 n n C2 C3 GOL sing 122 n n C2 H2 GOL sing 123 n n O2 HO2 GOL sing 124 n n C3 O3 GOL sing 125 n n C3 H31 GOL sing 126 n n C3 H32 GOL sing 127 n n O3 HO3 GOL sing 128 n n # _atom_sites.entry_id 2H46 _atom_sites.fract_transf_matrix[1][1] 0.012379 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012379 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013295 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL E 1 169 101 GOL GOL . C 3 HOH E 1 170 1 HOH HOH . C 3 HOH E 2 171 2 HOH HOH . C 3 HOH E 3 172 3 HOH HOH . C 3 HOH E 4 173 4 HOH HOH . C 3 HOH E 5 174 5 HOH HOH . C 3 HOH E 6 175 6 HOH HOH . C 3 HOH E 7 176 7 HOH HOH . C 3 HOH E 8 177 8 HOH HOH . C 3 HOH E 9 178 9 HOH HOH . C 3 HOH E 10 179 10 HOH HOH . C 3 HOH E 11 180 11 HOH HOH . C 3 HOH E 12 181 12 HOH HOH . C 3 HOH E 13 182 13 HOH HOH . C 3 HOH E 14 183 14 HOH HOH . C 3 HOH E 15 184 15 HOH HOH . C 3 HOH E 16 185 16 HOH HOH . C 3 HOH E 17 186 17 HOH HOH . C 3 HOH E 18 187 18 HOH HOH . C 3 HOH E 19 188 19 HOH HOH . C 3 HOH E 20 189 20 HOH HOH . C 3 HOH E 21 190 21 HOH HOH . C 3 HOH E 22 191 22 HOH HOH . C 3 HOH E 23 192 23 HOH HOH . C 3 HOH E 24 193 24 HOH HOH . C 3 HOH E 25 194 25 HOH HOH . C 3 HOH E 26 195 26 HOH HOH . C 3 HOH E 27 196 27 HOH HOH . C 3 HOH E 28 197 28 HOH HOH . C 3 HOH E 29 198 29 HOH HOH . C 3 HOH E 30 199 30 HOH HOH . C 3 HOH E 31 200 31 HOH HOH . C 3 HOH E 32 201 32 HOH HOH . C 3 HOH E 33 202 33 HOH HOH . C 3 HOH E 34 203 34 HOH HOH . C 3 HOH E 35 204 35 HOH HOH . C 3 HOH E 36 205 36 HOH HOH . C 3 HOH E 37 206 37 HOH HOH . C 3 HOH E 38 207 38 HOH HOH . C 3 HOH E 39 208 39 HOH HOH . C 3 HOH E 40 209 40 HOH HOH . C 3 HOH E 41 210 41 HOH HOH . C 3 HOH E 42 211 42 HOH HOH . C 3 HOH E 43 212 43 HOH HOH . C 3 HOH E 44 213 44 HOH HOH . C 3 HOH E 45 214 45 HOH HOH . C 3 HOH E 46 215 46 HOH HOH . C 3 HOH E 47 216 47 HOH HOH . C 3 HOH E 48 217 48 HOH HOH . C 3 HOH E 49 218 49 HOH HOH . C 3 HOH E 50 219 50 HOH HOH . C 3 HOH E 51 220 51 HOH HOH . C 3 HOH E 52 221 52 HOH HOH . C 3 HOH E 53 222 53 HOH HOH . C 3 HOH E 54 223 54 HOH HOH . C 3 HOH E 55 224 55 HOH HOH . C 3 HOH E 56 225 56 HOH HOH . C 3 HOH E 57 226 57 HOH HOH . C 3 HOH E 58 227 58 HOH HOH . C 3 HOH E 59 228 59 HOH HOH . C 3 HOH E 60 229 60 HOH HOH . C 3 HOH E 61 230 61 HOH HOH . C 3 HOH E 62 231 62 HOH HOH . C 3 HOH E 63 232 63 HOH HOH . C 3 HOH E 64 233 64 HOH HOH . C 3 HOH E 65 234 65 HOH HOH . C 3 HOH E 66 235 66 HOH HOH . C 3 HOH E 67 236 67 HOH HOH . C 3 HOH E 68 237 68 HOH HOH . C 3 HOH E 69 238 69 HOH HOH . C 3 HOH E 70 239 70 HOH HOH . C 3 HOH E 71 240 71 HOH HOH . C 3 HOH E 72 241 72 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 17.868 61.01 22.73 1 60.6 ? C1 GOL 169 E 1 HETATM 2 O O1 GOL . . . B 2 18.679 61.884 23.519 1 59.35 ? O1 GOL 169 E 1 HETATM 3 C C2 GOL . . . B 2 16.661 60.544 23.544 1 61.69 ? C2 GOL 169 E 1 HETATM 4 O O2 GOL . . . B 2 15.908 61.682 23.97 1 62.76 ? O2 GOL 169 E 1 HETATM 5 C C3 GOL . . . B 2 15.764 59.638 22.693 1 62.71 ? C3 GOL 169 E 1 HETATM 6 O O3 GOL . . . B 2 16.478 58.46 22.314 1 61.91 ? O3 GOL 169 E 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #