data_2H4J
#
_model_server_result.job_id            l0oT8Ky8LtHr0l00u8JOVw 
_model_server_result.datetime_utc      '2024-12-03 19:50:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2h4j 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1002}' 
#
_entry.id    2H4J 
#
_exptl.entry_id    2H4J 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              122.125 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            NICOTINAMIDE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2H4J 
_cell.length_a            46.049 
_cell.length_b            59.683 
_cell.length_c            107.35 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2H4J 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 124 A CYS 124 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? 
metalc ? metalc2 A SG CYS 127 A CYS 127 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? 
metalc ? metalc3 A SG CYS 148 A CYS 148 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? 
metalc ? metalc4 A SG CYS 151 A CYS 151 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? 
#
_chem_comp.formula           'C6 H6 N2 O' 
_chem_comp.formula_weight    122.125 
_chem_comp.id                NCA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              NICOTINAMIDE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 NCA doub 237 n y 
N1 C6 NCA sing 238 n y 
C2 C3 NCA sing 239 n y 
C2 H2 NCA sing 240 n n 
C3 C4 NCA doub 241 n y 
C3 C7 NCA sing 242 n n 
C4 C5 NCA sing 243 n y 
C4 H4 NCA sing 244 n n 
C5 C6 NCA doub 245 n y 
C5 H5 NCA sing 246 n n 
C6 H6 NCA sing 247 n n 
C7 O7 NCA doub 248 n n 
C7 N7 NCA sing 249 n n 
N7 HN71 NCA sing 250 n n 
N7 HN72 NCA sing 251 n n 
#
_atom_sites.entry_id                     2H4J 
_atom_sites.fract_transf_matrix[1][1]    0.021716 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016755 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009315 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 ZN A 1 1001 1001 ZN ZN . 
D 4 NCA A 1 1002 1 NCA NCA . 
E 5 OAD A 1 1003 2 OAD OAD . 
F 6 HOH A 1 1004 3 HOH HOH . 
F 6 HOH A 2 1005 5 HOH HOH . 
F 6 HOH A 3 1006 6 HOH HOH . 
F 6 HOH A 4 1007 7 HOH HOH . 
F 6 HOH A 5 1008 8 HOH HOH . 
F 6 HOH A 6 1009 9 HOH HOH . 
F 6 HOH A 7 1010 10 HOH HOH . 
F 6 HOH A 8 1011 11 HOH HOH . 
F 6 HOH A 9 1012 12 HOH HOH . 
F 6 HOH A 10 1013 13 HOH HOH . 
F 6 HOH A 11 1014 14 HOH HOH . 
F 6 HOH A 12 1015 15 HOH HOH . 
F 6 HOH A 13 1016 17 HOH HOH . 
F 6 HOH A 14 1017 20 HOH HOH . 
F 6 HOH A 15 1018 21 HOH HOH . 
F 6 HOH A 16 1019 22 HOH HOH . 
F 6 HOH A 17 1020 23 HOH HOH . 
F 6 HOH A 18 1021 25 HOH HOH . 
F 6 HOH A 19 1022 27 HOH HOH . 
F 6 HOH A 20 1023 28 HOH HOH . 
F 6 HOH A 21 1024 30 HOH HOH . 
F 6 HOH A 22 1025 34 HOH HOH . 
F 6 HOH A 23 1026 35 HOH HOH . 
F 6 HOH A 24 1027 36 HOH HOH . 
F 6 HOH A 25 1028 37 HOH HOH . 
F 6 HOH A 26 1029 38 HOH HOH . 
F 6 HOH A 27 1030 41 HOH HOH . 
F 6 HOH A 28 1031 42 HOH HOH . 
F 6 HOH A 29 1032 43 HOH HOH . 
F 6 HOH A 30 1033 47 HOH HOH . 
F 6 HOH A 31 1034 48 HOH HOH . 
F 6 HOH A 32 1035 49 HOH HOH . 
F 6 HOH A 33 1036 50 HOH HOH . 
F 6 HOH A 34 1037 51 HOH HOH . 
F 6 HOH A 35 1038 52 HOH HOH . 
F 6 HOH A 36 1039 53 HOH HOH . 
F 6 HOH A 37 1040 56 HOH HOH . 
F 6 HOH A 38 1041 57 HOH HOH . 
F 6 HOH A 39 1042 59 HOH HOH . 
F 6 HOH A 40 1043 60 HOH HOH . 
F 6 HOH A 41 1044 61 HOH HOH . 
F 6 HOH A 42 1045 64 HOH HOH . 
F 6 HOH A 43 1046 68 HOH HOH . 
F 6 HOH A 44 1047 72 HOH HOH . 
F 6 HOH A 45 1048 79 HOH HOH . 
F 6 HOH A 46 1049 80 HOH HOH . 
F 6 HOH A 47 1050 83 HOH HOH . 
F 6 HOH A 48 1051 88 HOH HOH . 
F 6 HOH A 49 1052 89 HOH HOH . 
F 6 HOH A 50 1053 92 HOH HOH . 
F 6 HOH A 51 1054 94 HOH HOH . 
F 6 HOH A 52 1055 97 HOH HOH . 
F 6 HOH A 53 1056 98 HOH HOH . 
F 6 HOH A 54 1057 99 HOH HOH . 
F 6 HOH A 55 1058 101 HOH HOH . 
F 6 HOH A 56 1059 105 HOH HOH . 
F 6 HOH A 57 1060 106 HOH HOH . 
F 6 HOH A 58 1061 108 HOH HOH . 
F 6 HOH A 59 1062 109 HOH HOH . 
F 6 HOH A 60 1063 110 HOH HOH . 
F 6 HOH A 61 1064 113 HOH HOH . 
F 6 HOH A 62 1065 114 HOH HOH . 
F 6 HOH A 63 1066 117 HOH HOH . 
F 6 HOH A 64 1067 118 HOH HOH . 
F 6 HOH A 65 1068 119 HOH HOH . 
F 6 HOH A 66 1069 121 HOH HOH . 
F 6 HOH A 67 1070 122 HOH HOH . 
F 6 HOH A 68 1071 125 HOH HOH . 
F 6 HOH A 69 1072 126 HOH HOH . 
F 6 HOH A 70 1073 131 HOH HOH . 
F 6 HOH A 71 1074 132 HOH HOH . 
F 6 HOH A 72 1075 136 HOH HOH . 
F 6 HOH A 73 1076 137 HOH HOH . 
F 6 HOH A 74 1077 138 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 NCA . . . D 4 6.317 24.512 10.424 1 70.27 ? N1 NCA 1002 A 1 
HETATM 2 C C2 NCA . . . D 4 5.251 24.128 9.68 1 63.94 ? C2 NCA 1002 A 1 
HETATM 3 C C3 NCA . . . D 4 3.957 23.995 10.215 1 64.87 ? C3 NCA 1002 A 1 
HETATM 4 C C4 NCA . . . D 4 3.763 24.281 11.574 1 63.56 ? C4 NCA 1002 A 1 
HETATM 5 C C5 NCA . . . D 4 4.853 24.677 12.36 1 71.49 ? C5 NCA 1002 A 1 
HETATM 6 C C6 NCA . . . D 4 6.202 24.79 11.733 1 63.46 ? C6 NCA 1002 A 1 
HETATM 7 C C7 NCA . . . D 4 2.775 23.564 9.353 1 67.69 ? C7 NCA 1002 A 1 
HETATM 8 O O7 NCA . . . D 4 1.687 23.486 9.882 1 60.72 ? O7 NCA 1002 A 1 
HETATM 9 N N7 NCA . . . D 4 2.916 23.265 8.049 1 61.21 ? N7 NCA 1002 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           274 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           9 
#