data_2H7R
#
_model_server_result.job_id            iFxpwrYFyVpQ318T5ce3Mg 
_model_server_result.datetime_utc      '2024-10-16 10:24:31' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2h7r 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":415}' 
#
_entry.id    2H7R 
#
_exptl.entry_id    2H7R 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          105.29 
_cell.angle_gamma         90 
_cell.entry_id            2H7R 
_cell.length_a            56.599 
_cell.length_b            58.784 
_cell.length_c            57.441 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2H7R 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 357 A CYS 357 1_555 B FE HEM . A HEM 415 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? 
metalc ? metalc2 B FE HEM . A HEM 415 1_555 C N3 1MZ . A 1MZ 416 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.788 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 142 n n 
CHA C4D HEM doub 143 n n 
CHA HHA HEM sing 144 n n 
CHB C4A HEM sing 145 n n 
CHB C1B HEM doub 146 n n 
CHB HHB HEM sing 147 n n 
CHC C4B HEM sing 148 n n 
CHC C1C HEM doub 149 n n 
CHC HHC HEM sing 150 n n 
CHD C4C HEM doub 151 n n 
CHD C1D HEM sing 152 n n 
CHD HHD HEM sing 153 n n 
C1A C2A HEM doub 154 n y 
C1A NA HEM sing 155 n y 
C2A C3A HEM sing 156 n y 
C2A CAA HEM sing 157 n n 
C3A C4A HEM doub 158 n y 
C3A CMA HEM sing 159 n n 
C4A NA HEM sing 160 n y 
CMA HMA HEM sing 161 n n 
CMA HMAA HEM sing 162 n n 
CMA HMAB HEM sing 163 n n 
CAA CBA HEM sing 164 n n 
CAA HAA HEM sing 165 n n 
CAA HAAA HEM sing 166 n n 
CBA CGA HEM sing 167 n n 
CBA HBA HEM sing 168 n n 
CBA HBAA HEM sing 169 n n 
CGA O1A HEM doub 170 n n 
CGA O2A HEM sing 171 n n 
C1B C2B HEM sing 172 n n 
C1B NB HEM sing 173 n n 
C2B C3B HEM doub 174 n n 
C2B CMB HEM sing 175 n n 
C3B C4B HEM sing 176 n n 
C3B CAB HEM sing 177 n n 
C4B NB HEM doub 178 n n 
CMB HMB HEM sing 179 n n 
CMB HMBA HEM sing 180 n n 
CMB HMBB HEM sing 181 n n 
CAB CBB HEM doub 182 n n 
CAB HAB HEM sing 183 n n 
CBB HBB HEM sing 184 n n 
CBB HBBA HEM sing 185 n n 
C1C C2C HEM sing 186 n y 
C1C NC HEM sing 187 n y 
C2C C3C HEM doub 188 n y 
C2C CMC HEM sing 189 n n 
C3C C4C HEM sing 190 n y 
C3C CAC HEM sing 191 n n 
C4C NC HEM sing 192 n y 
CMC HMC HEM sing 193 n n 
CMC HMCA HEM sing 194 n n 
CMC HMCB HEM sing 195 n n 
CAC CBC HEM doub 196 n n 
CAC HAC HEM sing 197 n n 
CBC HBC HEM sing 198 n n 
CBC HBCA HEM sing 199 n n 
C1D C2D HEM sing 200 n n 
C1D ND HEM doub 201 n n 
C2D C3D HEM doub 202 n n 
C2D CMD HEM sing 203 n n 
C3D C4D HEM sing 204 n n 
C3D CAD HEM sing 205 n n 
C4D ND HEM sing 206 n n 
CMD HMD HEM sing 207 n n 
CMD HMDA HEM sing 208 n n 
CMD HMDB HEM sing 209 n n 
CAD CBD HEM sing 210 n n 
CAD HAD HEM sing 211 n n 
CAD HADA HEM sing 212 n n 
CBD CGD HEM sing 213 n n 
CBD HBD HEM sing 214 n n 
CBD HBDA HEM sing 215 n n 
CGD O1D HEM doub 216 n n 
CGD O2D HEM sing 217 n n 
O2A H2A HEM sing 218 n n 
O2D H2D HEM sing 219 n n 
FE NA HEM sing 220 n n 
FE NB HEM sing 221 n n 
FE NC HEM sing 222 n n 
FE ND HEM sing 223 n n 
#
_atom_sites.entry_id                     2H7R 
_atom_sites.fract_transf_matrix[1][1]    0.017668 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00483 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017011 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018048 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HEM A 1 415 1 HEM HEM . 
C 3 1MZ A 1 416 293 1MZ 1MZ . 
D 4 HOH A 1 417 2 HOH TIP . 
D 4 HOH A 2 418 3 HOH TIP . 
D 4 HOH A 3 419 5 HOH TIP . 
D 4 HOH A 4 420 7 HOH TIP . 
D 4 HOH A 5 421 8 HOH TIP . 
D 4 HOH A 6 422 9 HOH TIP . 
D 4 HOH A 7 423 11 HOH TIP . 
D 4 HOH A 8 424 12 HOH TIP . 
D 4 HOH A 9 425 13 HOH TIP . 
D 4 HOH A 10 426 14 HOH TIP . 
D 4 HOH A 11 427 15 HOH TIP . 
D 4 HOH A 12 428 16 HOH TIP . 
D 4 HOH A 13 429 17 HOH TIP . 
D 4 HOH A 14 430 18 HOH TIP . 
D 4 HOH A 15 431 19 HOH TIP . 
D 4 HOH A 16 432 21 HOH TIP . 
D 4 HOH A 17 433 22 HOH TIP . 
D 4 HOH A 18 434 23 HOH TIP . 
D 4 HOH A 19 435 24 HOH TIP . 
D 4 HOH A 20 436 25 HOH TIP . 
D 4 HOH A 21 437 26 HOH TIP . 
D 4 HOH A 22 438 27 HOH TIP . 
D 4 HOH A 23 439 28 HOH TIP . 
D 4 HOH A 24 440 29 HOH TIP . 
D 4 HOH A 25 441 30 HOH TIP . 
D 4 HOH A 26 442 31 HOH TIP . 
D 4 HOH A 27 443 32 HOH TIP . 
D 4 HOH A 28 444 33 HOH TIP . 
D 4 HOH A 29 445 37 HOH TIP . 
D 4 HOH A 30 446 38 HOH TIP . 
D 4 HOH A 31 447 39 HOH TIP . 
D 4 HOH A 32 448 40 HOH TIP . 
D 4 HOH A 33 449 41 HOH TIP . 
D 4 HOH A 34 450 42 HOH TIP . 
D 4 HOH A 35 451 43 HOH TIP . 
D 4 HOH A 36 452 44 HOH TIP . 
D 4 HOH A 37 453 45 HOH TIP . 
D 4 HOH A 38 454 47 HOH TIP . 
D 4 HOH A 39 455 48 HOH TIP . 
D 4 HOH A 40 456 49 HOH TIP . 
D 4 HOH A 41 457 51 HOH TIP . 
D 4 HOH A 42 458 54 HOH TIP . 
D 4 HOH A 43 459 55 HOH TIP . 
D 4 HOH A 44 460 56 HOH TIP . 
D 4 HOH A 45 461 58 HOH TIP . 
D 4 HOH A 46 462 59 HOH TIP . 
D 4 HOH A 47 463 60 HOH TIP . 
D 4 HOH A 48 464 62 HOH TIP . 
D 4 HOH A 49 465 63 HOH TIP . 
D 4 HOH A 50 466 64 HOH TIP . 
D 4 HOH A 51 467 67 HOH TIP . 
D 4 HOH A 52 468 68 HOH TIP . 
D 4 HOH A 53 469 69 HOH TIP . 
D 4 HOH A 54 470 70 HOH TIP . 
D 4 HOH A 55 471 71 HOH TIP . 
D 4 HOH A 56 472 74 HOH TIP . 
D 4 HOH A 57 473 79 HOH TIP . 
D 4 HOH A 58 474 81 HOH TIP . 
D 4 HOH A 59 475 84 HOH TIP . 
D 4 HOH A 60 476 85 HOH TIP . 
D 4 HOH A 61 477 86 HOH TIP . 
D 4 HOH A 62 478 87 HOH TIP . 
D 4 HOH A 63 479 88 HOH TIP . 
D 4 HOH A 64 480 89 HOH TIP . 
D 4 HOH A 65 481 90 HOH TIP . 
D 4 HOH A 66 482 91 HOH TIP . 
D 4 HOH A 67 483 92 HOH TIP . 
D 4 HOH A 68 484 93 HOH TIP . 
D 4 HOH A 69 485 94 HOH TIP . 
D 4 HOH A 70 486 97 HOH TIP . 
D 4 HOH A 71 487 98 HOH TIP . 
D 4 HOH A 72 488 101 HOH TIP . 
D 4 HOH A 73 489 102 HOH TIP . 
D 4 HOH A 74 490 103 HOH TIP . 
D 4 HOH A 75 491 104 HOH TIP . 
D 4 HOH A 76 492 108 HOH TIP . 
D 4 HOH A 77 493 109 HOH TIP . 
D 4 HOH A 78 494 113 HOH TIP . 
D 4 HOH A 79 495 114 HOH TIP . 
D 4 HOH A 80 496 115 HOH TIP . 
D 4 HOH A 81 497 117 HOH TIP . 
D 4 HOH A 82 498 122 HOH TIP . 
D 4 HOH A 83 499 123 HOH TIP . 
D 4 HOH A 84 500 124 HOH TIP . 
D 4 HOH A 85 501 125 HOH TIP . 
D 4 HOH A 86 502 127 HOH TIP . 
D 4 HOH A 87 503 128 HOH TIP . 
D 4 HOH A 88 504 131 HOH TIP . 
D 4 HOH A 89 505 132 HOH TIP . 
D 4 HOH A 90 506 134 HOH TIP . 
D 4 HOH A 91 507 139 HOH TIP . 
D 4 HOH A 92 508 147 HOH TIP . 
D 4 HOH A 93 509 151 HOH TIP . 
D 4 HOH A 94 510 153 HOH TIP . 
D 4 HOH A 95 511 154 HOH TIP . 
D 4 HOH A 96 512 155 HOH TIP . 
D 4 HOH A 97 513 158 HOH TIP . 
D 4 HOH A 98 514 159 HOH TIP . 
D 4 HOH A 99 515 160 HOH TIP . 
D 4 HOH A 100 516 162 HOH TIP . 
D 4 HOH A 101 517 163 HOH TIP . 
D 4 HOH A 102 518 164 HOH TIP . 
D 4 HOH A 103 519 165 HOH TIP . 
D 4 HOH A 104 520 166 HOH TIP . 
D 4 HOH A 105 521 167 HOH TIP . 
D 4 HOH A 106 522 168 HOH TIP . 
D 4 HOH A 107 523 172 HOH TIP . 
D 4 HOH A 108 524 177 HOH TIP . 
D 4 HOH A 109 525 179 HOH TIP . 
D 4 HOH A 110 526 188 HOH TIP . 
D 4 HOH A 111 527 189 HOH TIP . 
D 4 HOH A 112 528 191 HOH TIP . 
D 4 HOH A 113 529 192 HOH TIP . 
D 4 HOH A 114 530 195 HOH TIP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . B 2 -36.722 -21.62 62.133 1 22.05 ? CHA HEM 415 A 1 
HETATM 2 C CHB HEM . . . B 2 -35.934 -21.302 66.914 1 22.81 ? CHB HEM 415 A 1 
HETATM 3 C CHC HEM . . . B 2 -40.518 -22.685 67.76 1 25.73 ? CHC HEM 415 A 1 
HETATM 4 C CHD HEM . . . B 2 -41.277 -23.078 62.994 1 26.2 ? CHD HEM 415 A 1 
HETATM 5 C C1A HEM . . . B 2 -36.096 -21.414 63.347 1 23.89 ? C1A HEM 415 A 1 
HETATM 6 C C2A HEM . . . B 2 -34.69 -20.994 63.536 1 23.39 ? C2A HEM 415 A 1 
HETATM 7 C C3A HEM . . . B 2 -34.478 -20.919 64.875 1 22.26 ? C3A HEM 415 A 1 
HETATM 8 C C4A HEM . . . B 2 -35.737 -21.276 65.53 1 22.19 ? C4A HEM 415 A 1 
HETATM 9 C CMA HEM . . . B 2 -33.203 -20.536 65.577 1 19.57 ? CMA HEM 415 A 1 
HETATM 10 C CAA HEM . . . B 2 -33.687 -20.698 62.447 1 22.4 ? CAA HEM 415 A 1 
HETATM 11 C CBA HEM . . . B 2 -33.167 -21.918 61.74 1 24.38 ? CBA HEM 415 A 1 
HETATM 12 C CGA HEM . . . B 2 -32.146 -21.654 60.643 1 25.82 ? CGA HEM 415 A 1 
HETATM 13 O O1A HEM . . . B 2 -31.831 -20.474 60.375 1 29.4 ? O1A HEM 415 A 1 
HETATM 14 O O2A HEM . . . B 2 -31.658 -22.647 60.049 1 31.84 ? O2A HEM 415 A 1 
HETATM 15 C C1B HEM . . . B 2 -37.099 -21.634 67.58 1 20.36 ? C1B HEM 415 A 1 
HETATM 16 C C2B HEM . . . B 2 -37.261 -21.648 69.029 1 21.63 ? C2B HEM 415 A 1 
HETATM 17 C C3B HEM . . . B 2 -38.557 -22.04 69.263 1 20.99 ? C3B HEM 415 A 1 
HETATM 18 C C4B HEM . . . B 2 -39.187 -22.259 67.962 1 24.37 ? C4B HEM 415 A 1 
HETATM 19 C CMB HEM . . . B 2 -36.19 -21.297 70.034 1 22.53 ? CMB HEM 415 A 1 
HETATM 20 C CAB HEM . . . B 2 -39.277 -22.235 70.548 1 17 ? CAB HEM 415 A 1 
HETATM 21 C CBB HEM . . . B 2 -39.373 -21.415 71.578 1 17.5 ? CBB HEM 415 A 1 
HETATM 22 C C1C HEM . . . B 2 -41.161 -22.928 66.551 1 25.41 ? C1C HEM 415 A 1 
HETATM 23 C C2C HEM . . . B 2 -42.537 -23.375 66.389 1 23.84 ? C2C HEM 415 A 1 
HETATM 24 C C3C HEM . . . B 2 -42.754 -23.495 65.042 1 27.24 ? C3C HEM 415 A 1 
HETATM 25 C C4C HEM . . . B 2 -41.5 -23.115 64.379 1 27.14 ? C4C HEM 415 A 1 
HETATM 26 C CMC HEM . . . B 2 -43.5 -23.634 67.527 1 22.6 ? CMC HEM 415 A 1 
HETATM 27 C CAC HEM . . . B 2 -43.991 -23.91 64.333 1 27.81 ? CAC HEM 415 A 1 
HETATM 28 C CBC HEM . . . B 2 -44.483 -25.139 64.227 1 31.95 ? CBC HEM 415 A 1 
HETATM 29 C C1D HEM . . . B 2 -40.109 -22.708 62.307 1 25.23 ? C1D HEM 415 A 1 
HETATM 30 C C2D HEM . . . B 2 -39.948 -22.677 60.875 1 24.42 ? C2D HEM 415 A 1 
HETATM 31 C C3D HEM . . . B 2 -38.657 -22.253 60.639 1 22.77 ? C3D HEM 415 A 1 
HETATM 32 C C4D HEM . . . B 2 -38.037 -22.039 61.919 1 24.12 ? C4D HEM 415 A 1 
HETATM 33 C CMD HEM . . . B 2 -41.006 -23.038 59.868 1 23.89 ? CMD HEM 415 A 1 
HETATM 34 C CAD HEM . . . B 2 -38.017 -22.052 59.298 1 26.86 ? CAD HEM 415 A 1 
HETATM 35 C CBD HEM . . . B 2 -38.177 -20.591 58.785 1 28.73 ? CBD HEM 415 A 1 
HETATM 36 C CGD HEM . . . B 2 -37.516 -20.418 57.406 1 34.21 ? CGD HEM 415 A 1 
HETATM 37 O O1D HEM . . . B 2 -37.864 -19.426 56.684 1 35.2 ? O1D HEM 415 A 1 
HETATM 38 O O2D HEM . . . B 2 -36.647 -21.281 57.059 1 32.87 ? O2D HEM 415 A 1 
HETATM 39 N NA HEM . . . B 2 -36.694 -21.58 64.591 1 22.36 ? NA HEM 415 A 1 
HETATM 40 N NB HEM . . . B 2 -38.285 -22.011 66.965 1 22.65 ? NB HEM 415 A 1 
HETATM 41 N NC HEM . . . B 2 -40.581 -22.79 65.328 1 25.67 ? NC HEM 415 A 1 
HETATM 42 N ND HEM . . . B 2 -38.937 -22.315 62.908 1 24.47 ? ND HEM 415 A 1 
HETATM 43 FE FE HEM . . . B 2 -38.645 -22.194 64.925 1 26.97 ? FE HEM 415 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           279 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           43 
#