data_2H94 # _model_server_result.job_id VMxcvrmGG9DuAYpoWGcW_g _model_server_result.datetime_utc '2024-11-22 14:59:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2h94 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":5000}' # _entry.id 2H94 # _exptl.entry_id 2H94 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2H94 _cell.length_a 187.943 _cell.length_b 187.943 _cell.length_c 108.741 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2H94 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B HG HG . A HG 1 1_555 A SG CYS 189 A CYS 360 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.709 ? metalc ? metalc2 B HG HG . A HG 1 1_555 A O CYS 189 A CYS 360 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.26 ? metalc ? metalc3 D HG HG . A HG 3 1_555 A SG CYS 402 A CYS 573 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.339 ? # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 2H94 _atom_sites.fract_transf_matrix[1][1] 0.005321 _atom_sites.fract_transf_matrix[1][2] 0.003072 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006144 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009196 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HG A 1 1 1 HG HG . C 2 HG A 1 2 2 HG HG . D 2 HG A 1 3 3 HG HG . E 3 FAD A 1 5000 5000 FAD FAD . F 4 HOH A 1 5001 1 HOH HOH . F 4 HOH A 2 5002 2 HOH HOH . F 4 HOH A 3 5003 3 HOH HOH . F 4 HOH A 4 5004 4 HOH HOH . F 4 HOH A 5 5005 5 HOH HOH . F 4 HOH A 6 5006 6 HOH HOH . F 4 HOH A 7 5007 7 HOH HOH . F 4 HOH A 8 5008 8 HOH HOH . F 4 HOH A 9 5009 9 HOH HOH . F 4 HOH A 10 5010 10 HOH HOH . F 4 HOH A 11 5011 11 HOH HOH . F 4 HOH A 12 5012 12 HOH HOH . F 4 HOH A 13 5013 13 HOH HOH . F 4 HOH A 14 5014 14 HOH HOH . F 4 HOH A 15 5015 15 HOH HOH . F 4 HOH A 16 5016 16 HOH HOH . F 4 HOH A 17 5017 17 HOH HOH . F 4 HOH A 18 5018 18 HOH HOH . F 4 HOH A 19 5019 19 HOH HOH . F 4 HOH A 20 5020 20 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . E 3 25.991 41.211 89.757 1 59.9 ? PA FAD 5000 A 1 HETATM 2 O O1A FAD . . . E 3 26.188 41.859 91.056 1 60.43 ? O1A FAD 5000 A 1 HETATM 3 O O2A FAD . . . E 3 26.643 41.429 88.462 1 59.05 ? O2A FAD 5000 A 1 HETATM 4 O O5B FAD . . . E 3 25.374 39.735 90.105 1 65.88 ? O5B FAD 5000 A 1 HETATM 5 C C5B FAD . . . E 3 24.971 38.534 89.333 1 66.77 ? C5B FAD 5000 A 1 HETATM 6 C C4B FAD . . . E 3 24.247 38.669 87.99 1 68.97 ? C4B FAD 5000 A 1 HETATM 7 O O4B FAD . . . E 3 23.134 37.729 87.981 1 71.02 ? O4B FAD 5000 A 1 HETATM 8 C C3B FAD . . . E 3 23.645 40.007 87.547 1 71.63 ? C3B FAD 5000 A 1 HETATM 9 O O3B FAD . . . E 3 23.977 40.32 86.203 1 71.77 ? O3B FAD 5000 A 1 HETATM 10 C C2B FAD . . . E 3 22.138 39.829 87.764 1 72.85 ? C2B FAD 5000 A 1 HETATM 11 O O2B FAD . . . E 3 21.269 40.639 87.001 1 73.23 ? O2B FAD 5000 A 1 HETATM 12 C C1B FAD . . . E 3 21.927 38.353 87.521 1 72.87 ? C1B FAD 5000 A 1 HETATM 13 N N9A FAD . . . E 3 20.756 37.748 88.211 1 75.6 ? N9A FAD 5000 A 1 HETATM 14 C C8A FAD . . . E 3 20.061 38.221 89.295 1 76.72 ? C8A FAD 5000 A 1 HETATM 15 N N7A FAD . . . E 3 19.056 37.457 89.686 1 77.05 ? N7A FAD 5000 A 1 HETATM 16 C C5A FAD . . . E 3 19.079 36.396 88.796 1 77.59 ? C5A FAD 5000 A 1 HETATM 17 C C6A FAD . . . E 3 18.252 35.208 88.682 1 77.78 ? C6A FAD 5000 A 1 HETATM 18 N N6A FAD . . . E 3 17.244 34.972 89.517 1 78.74 ? N6A FAD 5000 A 1 HETATM 19 N N1A FAD . . . E 3 18.518 34.322 87.685 1 77.32 ? N1A FAD 5000 A 1 HETATM 20 C C2A FAD . . . E 3 19.561 34.587 86.844 1 78.82 ? C2A FAD 5000 A 1 HETATM 21 N N3A FAD . . . E 3 20.402 35.653 86.855 1 79.24 ? N3A FAD 5000 A 1 HETATM 22 C C4A FAD . . . E 3 20.093 36.543 87.903 1 77.36 ? C4A FAD 5000 A 1 HETATM 23 N N1 FAD . . . E 3 32.192 48.291 92.887 1 63.87 ? N1 FAD 5000 A 1 HETATM 24 C C2 FAD . . . E 3 33.473 48.778 92.705 1 63.96 ? C2 FAD 5000 A 1 HETATM 25 O O2 FAD . . . E 3 34.493 48.048 92.71 1 62.37 ? O2 FAD 5000 A 1 HETATM 26 N N3 FAD . . . E 3 33.668 50.14 92.456 1 64.84 ? N3 FAD 5000 A 1 HETATM 27 C C4 FAD . . . E 3 32.642 51.101 92.419 1 66.35 ? C4 FAD 5000 A 1 HETATM 28 O O4 FAD . . . E 3 32.909 52.32 92.174 1 65.75 ? O4 FAD 5000 A 1 HETATM 29 C C4X FAD . . . E 3 31.337 50.599 92.651 1 64.94 ? C4X FAD 5000 A 1 HETATM 30 N N5 FAD . . . E 3 30.265 51.509 92.603 1 64.87 ? N5 FAD 5000 A 1 HETATM 31 C C5X FAD . . . E 3 28.981 51.02 92.729 1 65.64 ? C5X FAD 5000 A 1 HETATM 32 C C6 FAD . . . E 3 27.877 51.94 92.643 1 68.18 ? C6 FAD 5000 A 1 HETATM 33 C C7 FAD . . . E 3 26.557 51.509 92.711 1 69.08 ? C7 FAD 5000 A 1 HETATM 34 C C7M FAD . . . E 3 25.448 52.557 92.605 1 67.31 ? C7M FAD 5000 A 1 HETATM 35 C C8 FAD . . . E 3 26.271 50.123 92.859 1 69.48 ? C8 FAD 5000 A 1 HETATM 36 C C8M FAD . . . E 3 24.861 49.581 92.918 1 71.69 ? C8M FAD 5000 A 1 HETATM 37 C C9 FAD . . . E 3 27.374 49.184 92.958 1 67.08 ? C9 FAD 5000 A 1 HETATM 38 C C9A FAD . . . E 3 28.718 49.606 92.901 1 65.1 ? C9A FAD 5000 A 1 HETATM 39 N N10 FAD . . . E 3 29.837 48.685 92.982 1 63.3 ? N10 FAD 5000 A 1 HETATM 40 C C10 FAD . . . E 3 31.142 49.182 92.846 1 63.74 ? C10 FAD 5000 A 1 HETATM 41 C C1' FAD . . . E 3 29.543 47.246 93.171 1 60.17 ? C1' FAD 5000 A 1 HETATM 42 C C2' FAD . . . E 3 29.981 46.289 92.069 1 57.25 ? C2' FAD 5000 A 1 HETATM 43 O O2' FAD . . . E 3 29.476 46.764 90.837 1 58.44 ? O2' FAD 5000 A 1 HETATM 44 C C3' FAD . . . E 3 29.467 44.904 92.454 1 57.01 ? C3' FAD 5000 A 1 HETATM 45 O O3' FAD . . . E 3 30.04 44.56 93.709 1 60.35 ? O3' FAD 5000 A 1 HETATM 46 C C4' FAD . . . E 3 29.814 43.762 91.463 1 54.34 ? C4' FAD 5000 A 1 HETATM 47 O O4' FAD . . . E 3 29.29 44.046 90.177 1 52.94 ? O4' FAD 5000 A 1 HETATM 48 C C5' FAD . . . E 3 29.21 42.476 91.959 1 53.58 ? C5' FAD 5000 A 1 HETATM 49 O O5' FAD . . . E 3 29.581 41.428 91.089 1 56.7 ? O5' FAD 5000 A 1 HETATM 50 P P FAD . . . E 3 28.706 40.137 90.828 1 57.54 ? P FAD 5000 A 1 HETATM 51 O O1P FAD . . . E 3 29.534 39.32 89.963 1 60.11 ? O1P FAD 5000 A 1 HETATM 52 O O2P FAD . . . E 3 28.281 39.578 92.133 1 56.58 ? O2P FAD 5000 A 1 HETATM 53 O O3P FAD . . . E 3 27.39 40.43 89.909 1 59.5 ? O3P FAD 5000 A 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 53 #