data_2HB4
#
_model_server_result.job_id            bHtzv0BJgICaAJi0EL0h5w 
_model_server_result.datetime_utc      '2024-11-09 23:24:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2hb4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":908}' 
#
_entry.id    2HB4 
#
_exptl.entry_id    2HB4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              76.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            R-1,2-PROPANEDIOL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2HB4 
_cell.length_a            48.985 
_cell.length_b            48.985 
_cell.length_c            105.62 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2HB4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA,PQS 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 8_555 -y,-x,-z+1/2 0 -1 0 -1 0 0 0 0 -1 0 0 52.81 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B MG MG . A MG 101 1_555 F O HOH . A HOH 928 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? 
metalc ? metalc2 B MG MG . A MG 101 1_555 F O HOH . A HOH 928 8_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? 
metalc ? metalc3 B MG MG . A MG 101 1_555 F O HOH . A HOH 929 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? 
metalc ? metalc4 B MG MG . A MG 101 1_555 F O HOH . A HOH 929 8_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? 
metalc ? metalc5 B MG MG . A MG 101 1_555 F O HOH . A HOH 944 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.782 ? 
metalc ? metalc6 B MG MG . A MG 101 1_555 F O HOH . A HOH 944 8_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.658 ? 
metalc ? metalc7 B MG MG . A MG 101 1_555 F O HOH . A HOH 945 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.082 ? 
#
_chem_comp.formula           'C3 H8 O2' 
_chem_comp.formula_weight    76.094 
_chem_comp.id                PGR 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              R-1,2-PROPANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 PGR sing 237 n n 
C1 O1 PGR sing 238 n n 
C1 H11 PGR sing 239 n n 
C1 H12 PGR sing 240 n n 
C2 C3 PGR sing 241 n n 
C2 O2 PGR sing 242 n n 
C2 H2 PGR sing 243 n n 
C3 H31 PGR sing 244 n n 
C3 H32 PGR sing 245 n n 
C3 H33 PGR sing 246 n n 
O1 HO1 PGR sing 247 n n 
O2 HO2 PGR sing 248 n n 
#
_atom_sites.entry_id                     2HB4 
_atom_sites.fract_transf_matrix[1][1]    0.020414 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020414 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009468 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG A 1 101 101 MG MG . 
C 3 PGR A 1 906 906 PGR PGR . 
D 3 PGR A 1 907 907 PGR PGR . 
E 3 PGR A 1 908 908 PGR PGR . 
F 4 HOH A 1 909 1 HOH HOH . 
F 4 HOH A 2 910 3 HOH HOH . 
F 4 HOH A 3 911 4 HOH HOH . 
F 4 HOH A 4 912 5 HOH HOH . 
F 4 HOH A 5 913 7 HOH HOH . 
F 4 HOH A 6 914 9 HOH HOH . 
F 4 HOH A 7 915 10 HOH HOH . 
F 4 HOH A 8 916 11 HOH HOH . 
F 4 HOH A 9 917 13 HOH HOH . 
F 4 HOH A 10 918 14 HOH HOH . 
F 4 HOH A 11 919 15 HOH HOH . 
F 4 HOH A 12 920 16 HOH HOH . 
F 4 HOH A 13 921 17 HOH HOH . 
F 4 HOH A 14 922 18 HOH HOH . 
F 4 HOH A 15 923 19 HOH HOH . 
F 4 HOH A 16 924 21 HOH HOH . 
F 4 HOH A 17 925 22 HOH HOH . 
F 4 HOH A 18 926 23 HOH HOH . 
F 4 HOH A 19 927 24 HOH HOH . 
F 4 HOH A 20 928 25 HOH HOH . 
F 4 HOH A 21 929 26 HOH HOH . 
F 4 HOH A 22 930 27 HOH HOH . 
F 4 HOH A 23 931 28 HOH HOH . 
F 4 HOH A 24 932 29 HOH HOH . 
F 4 HOH A 25 933 30 HOH HOH . 
F 4 HOH A 26 934 31 HOH HOH . 
F 4 HOH A 27 935 34 HOH HOH . 
F 4 HOH A 28 936 49 HOH HOH . 
F 4 HOH A 29 937 50 HOH HOH . 
F 4 HOH A 30 938 51 HOH HOH . 
F 4 HOH A 31 939 53 HOH HOH . 
F 4 HOH A 32 940 56 HOH HOH . 
F 4 HOH A 33 941 57 HOH HOH . 
F 4 HOH A 34 942 58 HOH HOH . 
F 4 HOH A 35 943 59 HOH HOH . 
F 4 HOH A 36 944 63 HOH HOH . 
F 4 HOH A 37 945 64 HOH HOH . 
F 4 HOH A 38 946 67 HOH HOH . 
F 4 HOH A 39 947 68 HOH HOH . 
F 4 HOH A 40 948 69 HOH HOH . 
F 4 HOH A 41 949 70 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PGR . . . E 3 9.752 4.681 14.539 1 54.92 ? C1 PGR 908 A 1 
HETATM 2 C C2 PGR . . . E 3 9.563 3.947 13.184 1 43.46 ? C2 PGR 908 A 1 
HETATM 3 C C3 PGR . . . E 3 9.253 4.951 12.054 1 35.91 ? C3 PGR 908 A 1 
HETATM 4 O O1 PGR . . . E 3 8.698 5.553 15.045 1 62.87 ? O1 PGR 908 A 1 
HETATM 5 O O2 PGR . . . E 3 10.668 2.938 12.902 1 31.06 ? O2 PGR 908 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    1 
_model_server_stats.query_time_ms           303 
_model_server_stats.encode_time_ms          17 
_model_server_stats.element_count           5 
#