data_2HB7 # _model_server_result.job_id KTO5nIOL9Sjt84F-th820w _model_server_result.datetime_utc '2024-11-28 19:37:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2hb7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 2HB7 # _exptl.entry_id 2HB7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 474.716 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2ALPHA-(3-HYDROXYPROPYL)-1ALPHA,25-DIHYDROXYVITAMIN D3' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2HB7 _cell.length_a 44.981 _cell.length_b 51.368 _cell.length_c 132.201 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2HB7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C30 H50 O4' _chem_comp.formula_weight 474.716 _chem_comp.id O1C _chem_comp.mon_nstd_flag . _chem_comp.name '2ALPHA-(3-HYDROXYPROPYL)-1ALPHA,25-DIHYDROXYVITAMIN D3' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 9,10-SECOCHOLESTA-5,7,10(19)-TRIENE-1,3,25-TRIOL,2-(3-HYDROXYPROPYL)-,(1A,2A,3B,5Z,7E) # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C5 C10 O1C sing 237 n n C5 C4 O1C sing 238 n n C5 C6 O1C doub 239 z n C10 C1 O1C sing 240 n n C10 C19 O1C doub 241 n n C1 C2 O1C sing 242 n n C1 O1 O1C sing 243 n n C1 H1 O1C sing 244 n n C2 C3 O1C sing 245 n n C2 C28 O1C sing 246 n n C2 H2 O1C sing 247 n n C3 C4 O1C sing 248 n n C3 O2 O1C sing 249 n n C3 H3 O1C sing 250 n n C4 H41 O1C sing 251 n n C4 H42 O1C sing 252 n n C6 C7 O1C sing 253 n n C6 H6 O1C sing 254 n n C7 C8 O1C doub 255 e n C7 H7 O1C sing 256 n n C8 C14 O1C sing 257 n n C8 C9 O1C sing 258 n n C14 C13 O1C sing 259 n n C14 C15 O1C sing 260 n n C14 H14 O1C sing 261 n n C13 C12 O1C sing 262 n n C13 C17 O1C sing 263 n n C13 C18 O1C sing 264 n n C12 C11 O1C sing 265 n n C12 H121 O1C sing 266 n n C12 H122 O1C sing 267 n n C11 C9 O1C sing 268 n n C11 H111 O1C sing 269 n n C11 H112 O1C sing 270 n n C9 H91 O1C sing 271 n n C9 H92 O1C sing 272 n n C15 C16 O1C sing 273 n n C15 H151 O1C sing 274 n n C15 H152 O1C sing 275 n n C16 C17 O1C sing 276 n n C16 H161 O1C sing 277 n n C16 H162 O1C sing 278 n n C17 C20 O1C sing 279 n n C17 H17 O1C sing 280 n n C19 H191 O1C sing 281 n n C19 H192 O1C sing 282 n n O2 HO2 O1C sing 283 n n O1 HO1 O1C sing 284 n n C20 C22 O1C sing 285 n n C20 C21 O1C sing 286 n n C20 H20 O1C sing 287 n n C22 C23 O1C sing 288 n n C22 H221 O1C sing 289 n n C22 H222 O1C sing 290 n n C18 H181 O1C sing 291 n n C18 H182 O1C sing 292 n n C18 H183 O1C sing 293 n n C21 H211 O1C sing 294 n n C21 H212 O1C sing 295 n n C21 H213 O1C sing 296 n n C23 C24 O1C sing 297 n n C23 H231 O1C sing 298 n n C23 H232 O1C sing 299 n n C24 C25 O1C sing 300 n n C24 H241 O1C sing 301 n n C24 H242 O1C sing 302 n n C25 O25 O1C sing 303 n n C25 C27 O1C sing 304 n n C25 C26 O1C sing 305 n n O25 H25 O1C sing 306 n n C27 H271 O1C sing 307 n n C27 H272 O1C sing 308 n n C27 H273 O1C sing 309 n n C26 H261 O1C sing 310 n n C26 H262 O1C sing 311 n n C26 H263 O1C sing 312 n n C28 C29 O1C sing 313 n n C28 H281 O1C sing 314 n n C28 H282 O1C sing 315 n n C29 C30 O1C sing 316 n n C29 H291 O1C sing 317 n n C29 H292 O1C sing 318 n n C30 O31 O1C sing 319 n n C30 H301 O1C sing 320 n n C30 H302 O1C sing 321 n n O31 H31 O1C sing 322 n n # _atom_sites.entry_id 2HB7 _atom_sites.fract_transf_matrix[1][1] 0.022232 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019467 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007564 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 O1C A 1 1001 1 O1C O1C . C 3 HOH A 1 1002 1 HOH TIP . C 3 HOH A 2 1003 2 HOH TIP . C 3 HOH A 3 1004 3 HOH TIP . C 3 HOH A 4 1005 4 HOH TIP . C 3 HOH A 5 1006 5 HOH TIP . C 3 HOH A 6 1007 6 HOH TIP . C 3 HOH A 7 1008 7 HOH TIP . C 3 HOH A 8 1009 8 HOH TIP . C 3 HOH A 9 1010 9 HOH TIP . C 3 HOH A 10 1011 10 HOH TIP . C 3 HOH A 11 1012 11 HOH TIP . C 3 HOH A 12 1013 12 HOH TIP . C 3 HOH A 13 1014 13 HOH TIP . C 3 HOH A 14 1015 14 HOH TIP . C 3 HOH A 15 1016 15 HOH TIP . C 3 HOH A 16 1017 16 HOH TIP . C 3 HOH A 17 1018 17 HOH TIP . C 3 HOH A 18 1019 18 HOH TIP . C 3 HOH A 19 1020 19 HOH TIP . C 3 HOH A 20 1021 20 HOH TIP . C 3 HOH A 21 1022 21 HOH TIP . C 3 HOH A 22 1023 22 HOH TIP . C 3 HOH A 23 1024 23 HOH TIP . C 3 HOH A 24 1025 24 HOH TIP . C 3 HOH A 25 1026 25 HOH TIP . C 3 HOH A 26 1027 26 HOH TIP . C 3 HOH A 27 1028 27 HOH TIP . C 3 HOH A 28 1029 28 HOH TIP . C 3 HOH A 29 1030 29 HOH TIP . C 3 HOH A 30 1031 30 HOH TIP . C 3 HOH A 31 1032 31 HOH TIP . C 3 HOH A 32 1033 32 HOH TIP . C 3 HOH A 33 1034 33 HOH TIP . C 3 HOH A 34 1035 34 HOH TIP . C 3 HOH A 35 1036 35 HOH TIP . C 3 HOH A 36 1037 36 HOH TIP . C 3 HOH A 37 1038 37 HOH TIP . C 3 HOH A 38 1039 38 HOH TIP . C 3 HOH A 39 1040 39 HOH TIP . C 3 HOH A 40 1041 40 HOH TIP . C 3 HOH A 41 1042 41 HOH TIP . C 3 HOH A 42 1043 42 HOH TIP . C 3 HOH A 43 1044 43 HOH TIP . C 3 HOH A 44 1045 44 HOH TIP . C 3 HOH A 45 1046 45 HOH TIP . C 3 HOH A 46 1047 46 HOH TIP . C 3 HOH A 47 1048 47 HOH TIP . C 3 HOH A 48 1049 48 HOH TIP . C 3 HOH A 49 1050 49 HOH TIP . C 3 HOH A 50 1051 50 HOH TIP . C 3 HOH A 51 1052 51 HOH TIP . C 3 HOH A 52 1053 52 HOH TIP . C 3 HOH A 53 1054 53 HOH TIP . C 3 HOH A 54 1055 54 HOH TIP . C 3 HOH A 55 1056 55 HOH TIP . C 3 HOH A 56 1057 56 HOH TIP . C 3 HOH A 57 1058 57 HOH TIP . C 3 HOH A 58 1059 58 HOH TIP . C 3 HOH A 59 1060 59 HOH TIP . C 3 HOH A 60 1061 60 HOH TIP . C 3 HOH A 61 1062 61 HOH TIP . C 3 HOH A 62 1063 62 HOH TIP . C 3 HOH A 63 1064 63 HOH TIP . C 3 HOH A 64 1065 64 HOH TIP . C 3 HOH A 65 1066 65 HOH TIP . C 3 HOH A 66 1067 66 HOH TIP . C 3 HOH A 67 1068 67 HOH TIP . C 3 HOH A 68 1069 68 HOH TIP . C 3 HOH A 69 1070 69 HOH TIP . C 3 HOH A 70 1071 70 HOH TIP . C 3 HOH A 71 1072 71 HOH TIP . C 3 HOH A 72 1073 72 HOH TIP . C 3 HOH A 73 1074 73 HOH TIP . C 3 HOH A 74 1075 74 HOH TIP . C 3 HOH A 75 1076 75 HOH TIP . C 3 HOH A 76 1077 76 HOH TIP . C 3 HOH A 77 1078 77 HOH TIP . C 3 HOH A 78 1079 78 HOH TIP . C 3 HOH A 79 1080 79 HOH TIP . C 3 HOH A 80 1081 80 HOH TIP . C 3 HOH A 81 1082 81 HOH TIP . C 3 HOH A 82 1083 82 HOH TIP . C 3 HOH A 83 1084 83 HOH TIP . C 3 HOH A 84 1085 84 HOH TIP . C 3 HOH A 85 1086 85 HOH TIP . C 3 HOH A 86 1087 86 HOH TIP . C 3 HOH A 87 1088 87 HOH TIP . C 3 HOH A 88 1089 88 HOH TIP . C 3 HOH A 89 1090 89 HOH TIP . C 3 HOH A 90 1091 90 HOH TIP . C 3 HOH A 91 1092 91 HOH TIP . C 3 HOH A 92 1093 92 HOH TIP . C 3 HOH A 93 1094 93 HOH TIP . C 3 HOH A 94 1095 94 HOH TIP . C 3 HOH A 95 1096 95 HOH TIP . C 3 HOH A 96 1097 96 HOH TIP . C 3 HOH A 97 1098 97 HOH TIP . C 3 HOH A 98 1099 98 HOH TIP . C 3 HOH A 99 1100 99 HOH TIP . C 3 HOH A 100 1101 100 HOH TIP . C 3 HOH A 101 1102 101 HOH TIP . C 3 HOH A 102 1103 102 HOH TIP . C 3 HOH A 103 1104 103 HOH TIP . C 3 HOH A 104 1105 104 HOH TIP . C 3 HOH A 105 1106 105 HOH TIP . C 3 HOH A 106 1107 106 HOH TIP . C 3 HOH A 107 1108 107 HOH TIP . C 3 HOH A 108 1109 108 HOH TIP . C 3 HOH A 109 1110 109 HOH TIP . C 3 HOH A 110 1111 110 HOH TIP . C 3 HOH A 111 1112 111 HOH TIP . C 3 HOH A 112 1113 112 HOH TIP . C 3 HOH A 113 1114 113 HOH TIP . C 3 HOH A 114 1115 114 HOH TIP . C 3 HOH A 115 1116 115 HOH TIP . C 3 HOH A 116 1117 116 HOH TIP . C 3 HOH A 117 1118 117 HOH TIP . C 3 HOH A 118 1119 118 HOH TIP . C 3 HOH A 119 1120 119 HOH TIP . C 3 HOH A 120 1121 120 HOH TIP . C 3 HOH A 121 1122 121 HOH TIP . C 3 HOH A 122 1123 122 HOH TIP . C 3 HOH A 123 1124 123 HOH TIP . C 3 HOH A 124 1125 124 HOH TIP . C 3 HOH A 125 1126 125 HOH TIP . C 3 HOH A 126 1127 126 HOH TIP . C 3 HOH A 127 1128 127 HOH TIP . C 3 HOH A 128 1129 128 HOH TIP . C 3 HOH A 129 1130 129 HOH TIP . C 3 HOH A 130 1131 130 HOH TIP . C 3 HOH A 131 1132 131 HOH TIP . C 3 HOH A 132 1133 132 HOH TIP . C 3 HOH A 133 1134 133 HOH TIP . C 3 HOH A 134 1135 134 HOH TIP . C 3 HOH A 135 1136 135 HOH TIP . C 3 HOH A 136 1137 136 HOH TIP . C 3 HOH A 137 1138 137 HOH TIP . C 3 HOH A 138 1139 138 HOH TIP . C 3 HOH A 139 1140 139 HOH TIP . C 3 HOH A 140 1141 140 HOH TIP . C 3 HOH A 141 1142 141 HOH TIP . C 3 HOH A 142 1143 142 HOH TIP . C 3 HOH A 143 1144 143 HOH TIP . C 3 HOH A 144 1145 144 HOH TIP . C 3 HOH A 145 1146 145 HOH TIP . C 3 HOH A 146 1147 146 HOH TIP . C 3 HOH A 147 1148 147 HOH TIP . C 3 HOH A 148 1149 148 HOH TIP . C 3 HOH A 149 1150 149 HOH TIP . C 3 HOH A 150 1151 150 HOH TIP . C 3 HOH A 151 1152 151 HOH TIP . C 3 HOH A 152 1153 152 HOH TIP . C 3 HOH A 153 1154 153 HOH TIP . C 3 HOH A 154 1155 154 HOH TIP . C 3 HOH A 155 1156 155 HOH TIP . C 3 HOH A 156 1157 156 HOH TIP . C 3 HOH A 157 1158 157 HOH TIP . C 3 HOH A 158 1159 158 HOH TIP . C 3 HOH A 159 1160 159 HOH TIP . C 3 HOH A 160 1161 160 HOH TIP . C 3 HOH A 161 1162 161 HOH TIP . C 3 HOH A 162 1163 162 HOH TIP . C 3 HOH A 163 1164 163 HOH TIP . C 3 HOH A 164 1165 164 HOH TIP . C 3 HOH A 165 1166 165 HOH TIP . C 3 HOH A 166 1167 166 HOH TIP . C 3 HOH A 167 1168 167 HOH TIP . C 3 HOH A 168 1169 168 HOH TIP . C 3 HOH A 169 1170 169 HOH TIP . C 3 HOH A 170 1171 170 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C5 O1C . . . B 2 14.493 19.284 33.815 1 12.46 ? C5 O1C 1001 A 1 HETATM 2 C C10 O1C . . . B 2 13.441 18.711 34.79 1 14.13 ? C10 O1C 1001 A 1 HETATM 3 C C1 O1C . . . B 2 14.073 17.696 35.814 1 12.05 ? C1 O1C 1001 A 1 HETATM 4 C C2 O1C . . . B 2 14.84 16.506 35.063 1 12.33 ? C2 O1C 1001 A 1 HETATM 5 C C3 O1C . . . B 2 15.917 17.127 34.047 1 11.91 ? C3 O1C 1001 A 1 HETATM 6 C C4 O1C . . . B 2 15.275 18.2 33.074 1 11.54 ? C4 O1C 1001 A 1 HETATM 7 C C6 O1C . . . B 2 14.77 20.585 33.575 1 13.04 ? C6 O1C 1001 A 1 HETATM 8 C C7 O1C . . . B 2 14.133 21.745 34.182 1 13.82 ? C7 O1C 1001 A 1 HETATM 9 C C8 O1C . . . B 2 13.845 22.919 33.627 1 13.13 ? C8 O1C 1001 A 1 HETATM 10 C C14 O1C . . . B 2 13.151 24.059 34.37 1 13.99 ? C14 O1C 1001 A 1 HETATM 11 C C13 O1C . . . B 2 11.726 24.431 33.684 1 15.66 ? C13 O1C 1001 A 1 HETATM 12 C C12 O1C . . . B 2 12.026 24.846 32.168 1 16.12 ? C12 O1C 1001 A 1 HETATM 13 C C11 O1C . . . B 2 12.964 23.888 31.357 1 17.02 ? C11 O1C 1001 A 1 HETATM 14 C C9 O1C . . . B 2 14.159 23.261 32.15 1 16.91 ? C9 O1C 1001 A 1 HETATM 15 C C15 O1C . . . B 2 12.725 23.89 35.898 1 13.24 ? C15 O1C 1001 A 1 HETATM 16 C C16 O1C . . . B 2 11.518 24.87 36.09 1 18.27 ? C16 O1C 1001 A 1 HETATM 17 C C17 O1C . . . B 2 11.322 25.574 34.697 1 15.68 ? C17 O1C 1001 A 1 HETATM 18 C C19 O1C . . . B 2 12.094 19.012 34.756 1 14.27 ? C19 O1C 1001 A 1 HETATM 19 O O2 O1C . . . B 2 16.947 17.77 34.782 1 13.8 ? O2 O1C 1001 A 1 HETATM 20 O O1 O1C . . . B 2 13.1 17.142 36.656 1 15.15 ? O1 O1C 1001 A 1 HETATM 21 C C20 O1C . . . B 2 9.858 26.242 34.542 1 18.81 ? C20 O1C 1001 A 1 HETATM 22 C C22 O1C . . . B 2 8.595 25.462 35.054 1 19.2 ? C22 O1C 1001 A 1 HETATM 23 C C18 O1C . . . B 2 10.723 23.181 33.607 1 14.39 ? C18 O1C 1001 A 1 HETATM 24 C C21 O1C . . . B 2 9.815 27.642 35.231 1 23.45 ? C21 O1C 1001 A 1 HETATM 25 C C23 O1C . . . B 2 7.392 25.638 34.097 1 14.17 ? C23 O1C 1001 A 1 HETATM 26 C C24 O1C . . . B 2 6.159 24.791 34.463 1 21.7 ? C24 O1C 1001 A 1 HETATM 27 C C25 O1C . . . B 2 4.729 25.368 34.109 1 23.23 ? C25 O1C 1001 A 1 HETATM 28 O O25 O1C . . . B 2 4.479 26.556 34.842 1 21.15 ? O25 O1C 1001 A 1 HETATM 29 C C27 O1C . . . B 2 3.627 24.33 34.479 1 30.13 ? C27 O1C 1001 A 1 HETATM 30 C C26 O1C . . . B 2 4.606 25.671 32.576 1 29.13 ? C26 O1C 1001 A 1 HETATM 31 C C28 O1C . . . B 2 13.865 15.533 34.25 1 13.73 ? C28 O1C 1001 A 1 HETATM 32 C C29 O1C . . . B 2 14.5 14.234 33.684 1 14.66 ? C29 O1C 1001 A 1 HETATM 33 C C30 O1C . . . B 2 14.976 13.249 34.792 1 12.93 ? C30 O1C 1001 A 1 HETATM 34 O O31 O1C . . . B 2 13.937 12.805 35.619 1 13.08 ? O31 O1C 1001 A 1 # _model_server_stats.io_time_ms 39 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 34 #