data_2HCR
#
_model_server_result.job_id            j7j4D7YaWk3DS44P3NBJ-Q 
_model_server_result.datetime_utc      '2025-09-01 01:44:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2hcr 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":3002}' 
#
_entry.id    2HCR 
#
_exptl.entry_id    2HCR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              347.221 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ADENOSINE MONOPHOSPHATE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2HCR 
_cell.length_a            170.236 
_cell.length_b            170.236 
_cell.length_c            61.82 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2HCR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3' 
#
_pdbx_struct_assembly.method_details        PISA,PQS 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_565 -y,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 -85.118 147.428701 0 
3 'crystal symmetry operation' 3_455 -x+y-1,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -170.236 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 171 A ASP 171 1_555 F CD CD . A CD 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.617 ? 
metalc ? metalc2 A OD2 ASP 171 A ASP 171 1_555 F CD CD . A CD 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.988 ? 
metalc ? metalc3 A OD1 ASP 220 A ASP 220 1_555 F CD CD . A CD 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.123 ? 
metalc ? metalc4 B OD1 ASP 171 B ASP 171 1_555 K CD CD . B CD 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.759 ? 
metalc ? metalc5 B OD2 ASP 171 B ASP 171 1_555 K CD CD . B CD 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? 
metalc ? metalc6 B OD1 ASP 220 B ASP 220 1_555 K CD CD . B CD 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.659 ? 
#
_chem_comp.formula           'C10 H14 N5 O7 P' 
_chem_comp.formula_weight    347.221 
_chem_comp.id                AMP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ADENOSINE MONOPHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1P AMP doub 13 n n 
P O2P AMP sing 14 n n 
P O3P AMP sing 15 n n 
P O5' AMP sing 16 n n 
O2P HOP2 AMP sing 17 n n 
O3P HOP3 AMP sing 18 n n 
O5' C5' AMP sing 19 n n 
C5' C4' AMP sing 20 n n 
C5' "H5'1" AMP sing 21 n n 
C5' "H5'2" AMP sing 22 n n 
C4' O4' AMP sing 23 n n 
C4' C3' AMP sing 24 n n 
C4' H4' AMP sing 25 n n 
O4' C1' AMP sing 26 n n 
C3' O3' AMP sing 27 n n 
C3' C2' AMP sing 28 n n 
C3' H3' AMP sing 29 n n 
O3' HO3' AMP sing 30 n n 
C2' O2' AMP sing 31 n n 
C2' C1' AMP sing 32 n n 
C2' H2' AMP sing 33 n n 
O2' HO2' AMP sing 34 n n 
C1' N9 AMP sing 35 n n 
C1' H1' AMP sing 36 n n 
N9 C8 AMP sing 37 n y 
N9 C4 AMP sing 38 n y 
C8 N7 AMP doub 39 n y 
C8 H8 AMP sing 40 n n 
N7 C5 AMP sing 41 n y 
C5 C6 AMP sing 42 n y 
C5 C4 AMP doub 43 n y 
C6 N6 AMP sing 44 n n 
C6 N1 AMP doub 45 n y 
N6 HN61 AMP sing 46 n n 
N6 HN62 AMP sing 47 n n 
N1 C2 AMP sing 48 n y 
C2 N3 AMP doub 49 n y 
C2 H2 AMP sing 50 n n 
N3 C4 AMP sing 51 n y 
#
_atom_sites.entry_id                     2HCR 
_atom_sites.fract_transf_matrix[1][1]    0.005874 
_atom_sites.fract_transf_matrix[1][2]    0.003391 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006783 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016176 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SO4 A 1 1001 1001 SO4 SO4 . 
D 2 SO4 A 1 1004 1004 SO4 SO4 . 
E 2 SO4 A 1 1006 1006 SO4 SO4 . 
F 3 CD A 1 2002 2002 CD CD . 
G 4 AMP A 1 3001 3001 AMP AMP . 
H 2 SO4 B 1 1002 1002 SO4 SO4 . 
I 2 SO4 B 1 1003 1003 SO4 SO4 . 
J 2 SO4 B 1 1005 1005 SO4 SO4 . 
K 3 CD B 1 2001 2001 CD CD . 
L 4 AMP B 1 3002 3002 AMP AMP . 
M 5 HOH A 1 3002 2 HOH HOH . 
M 5 HOH A 2 3003 4 HOH HOH . 
M 5 HOH A 3 3004 6 HOH HOH . 
M 5 HOH A 4 3005 8 HOH HOH . 
M 5 HOH A 5 3006 10 HOH HOH . 
M 5 HOH A 6 3007 15 HOH HOH . 
M 5 HOH A 7 3008 16 HOH HOH . 
M 5 HOH A 8 3009 17 HOH HOH . 
M 5 HOH A 9 3010 18 HOH HOH . 
M 5 HOH A 10 3011 19 HOH HOH . 
M 5 HOH A 11 3012 26 HOH HOH . 
M 5 HOH A 12 3013 31 HOH HOH . 
M 5 HOH A 13 3014 32 HOH HOH . 
M 5 HOH A 14 3015 33 HOH HOH . 
M 5 HOH A 15 3016 34 HOH HOH . 
M 5 HOH A 16 3017 35 HOH HOH . 
M 5 HOH A 17 3018 41 HOH HOH . 
M 5 HOH A 18 3019 44 HOH HOH . 
M 5 HOH A 19 3020 47 HOH HOH . 
M 5 HOH A 20 3021 48 HOH HOH . 
M 5 HOH A 21 3022 51 HOH HOH . 
M 5 HOH A 22 3023 54 HOH HOH . 
M 5 HOH A 23 3024 55 HOH HOH . 
M 5 HOH A 24 3025 56 HOH HOH . 
M 5 HOH A 25 3026 58 HOH HOH . 
M 5 HOH A 26 3027 59 HOH HOH . 
M 5 HOH A 27 3028 60 HOH HOH . 
M 5 HOH A 28 3029 64 HOH HOH . 
M 5 HOH A 29 3030 68 HOH HOH . 
M 5 HOH A 30 3031 70 HOH HOH . 
M 5 HOH A 31 3032 77 HOH HOH . 
M 5 HOH A 32 3033 79 HOH HOH . 
M 5 HOH A 33 3034 83 HOH HOH . 
M 5 HOH A 34 3035 85 HOH HOH . 
M 5 HOH A 35 3036 92 HOH HOH . 
M 5 HOH A 36 3037 93 HOH HOH . 
M 5 HOH A 37 3038 94 HOH HOH . 
M 5 HOH A 38 3039 95 HOH HOH . 
M 5 HOH A 39 3040 99 HOH HOH . 
M 5 HOH A 40 3041 102 HOH HOH . 
M 5 HOH A 41 3042 103 HOH HOH . 
M 5 HOH A 42 3043 105 HOH HOH . 
M 5 HOH A 43 3044 108 HOH HOH . 
M 5 HOH A 44 3045 110 HOH HOH . 
M 5 HOH A 45 3046 112 HOH HOH . 
M 5 HOH A 46 3047 114 HOH HOH . 
M 5 HOH A 47 3048 120 HOH HOH . 
M 5 HOH A 48 3049 122 HOH HOH . 
M 5 HOH A 49 3050 124 HOH HOH . 
M 5 HOH A 50 3051 125 HOH HOH . 
M 5 HOH A 51 3052 126 HOH HOH . 
M 5 HOH A 52 3053 129 HOH HOH . 
M 5 HOH A 53 3054 130 HOH HOH . 
M 5 HOH A 54 3055 131 HOH HOH . 
M 5 HOH A 55 3056 132 HOH HOH . 
M 5 HOH A 56 3057 134 HOH HOH . 
M 5 HOH A 57 3058 135 HOH HOH . 
M 5 HOH A 58 3059 136 HOH HOH . 
M 5 HOH A 59 3060 144 HOH HOH . 
N 5 HOH B 1 3003 1 HOH HOH . 
N 5 HOH B 2 3004 3 HOH HOH . 
N 5 HOH B 3 3005 5 HOH HOH . 
N 5 HOH B 4 3006 7 HOH HOH . 
N 5 HOH B 5 3007 9 HOH HOH . 
N 5 HOH B 6 3008 11 HOH HOH . 
N 5 HOH B 7 3009 12 HOH HOH . 
N 5 HOH B 8 3010 13 HOH HOH . 
N 5 HOH B 9 3011 14 HOH HOH . 
N 5 HOH B 10 3012 20 HOH HOH . 
N 5 HOH B 11 3013 21 HOH HOH . 
N 5 HOH B 12 3014 22 HOH HOH . 
N 5 HOH B 13 3015 23 HOH HOH . 
N 5 HOH B 14 3016 24 HOH HOH . 
N 5 HOH B 15 3017 25 HOH HOH . 
N 5 HOH B 16 3018 27 HOH HOH . 
N 5 HOH B 17 3019 28 HOH HOH . 
N 5 HOH B 18 3020 29 HOH HOH . 
N 5 HOH B 19 3021 30 HOH HOH . 
N 5 HOH B 20 3022 36 HOH HOH . 
N 5 HOH B 21 3023 37 HOH HOH . 
N 5 HOH B 22 3024 38 HOH HOH . 
N 5 HOH B 23 3025 39 HOH HOH . 
N 5 HOH B 24 3026 40 HOH HOH . 
N 5 HOH B 25 3027 42 HOH HOH . 
N 5 HOH B 26 3028 43 HOH HOH . 
N 5 HOH B 27 3029 45 HOH HOH . 
N 5 HOH B 28 3030 46 HOH HOH . 
N 5 HOH B 29 3031 49 HOH HOH . 
N 5 HOH B 30 3032 50 HOH HOH . 
N 5 HOH B 31 3033 52 HOH HOH . 
N 5 HOH B 32 3034 53 HOH HOH . 
N 5 HOH B 33 3035 57 HOH HOH . 
N 5 HOH B 34 3036 61 HOH HOH . 
N 5 HOH B 35 3037 62 HOH HOH . 
N 5 HOH B 36 3038 63 HOH HOH . 
N 5 HOH B 37 3039 65 HOH HOH . 
N 5 HOH B 38 3040 66 HOH HOH . 
N 5 HOH B 39 3041 67 HOH HOH . 
N 5 HOH B 40 3042 69 HOH HOH . 
N 5 HOH B 41 3043 71 HOH HOH . 
N 5 HOH B 42 3044 72 HOH HOH . 
N 5 HOH B 43 3045 73 HOH HOH . 
N 5 HOH B 44 3046 74 HOH HOH . 
N 5 HOH B 45 3047 75 HOH HOH . 
N 5 HOH B 46 3048 76 HOH HOH . 
N 5 HOH B 47 3049 78 HOH HOH . 
N 5 HOH B 48 3050 80 HOH HOH . 
N 5 HOH B 49 3051 81 HOH HOH . 
N 5 HOH B 50 3052 82 HOH HOH . 
N 5 HOH B 51 3053 84 HOH HOH . 
N 5 HOH B 52 3054 86 HOH HOH . 
N 5 HOH B 53 3055 87 HOH HOH . 
N 5 HOH B 54 3056 88 HOH HOH . 
N 5 HOH B 55 3057 89 HOH HOH . 
N 5 HOH B 56 3058 90 HOH HOH . 
N 5 HOH B 57 3059 91 HOH HOH . 
N 5 HOH B 58 3060 96 HOH HOH . 
N 5 HOH B 59 3061 97 HOH HOH . 
N 5 HOH B 60 3062 98 HOH HOH . 
N 5 HOH B 61 3063 100 HOH HOH . 
N 5 HOH B 62 3064 101 HOH HOH . 
N 5 HOH B 63 3065 104 HOH HOH . 
N 5 HOH B 64 3066 106 HOH HOH . 
N 5 HOH B 65 3067 107 HOH HOH . 
N 5 HOH B 66 3068 109 HOH HOH . 
N 5 HOH B 67 3069 111 HOH HOH . 
N 5 HOH B 68 3070 113 HOH HOH . 
N 5 HOH B 69 3071 115 HOH HOH . 
N 5 HOH B 70 3072 116 HOH HOH . 
N 5 HOH B 71 3073 117 HOH HOH . 
N 5 HOH B 72 3074 118 HOH HOH . 
N 5 HOH B 73 3075 119 HOH HOH . 
N 5 HOH B 74 3076 121 HOH HOH . 
N 5 HOH B 75 3077 123 HOH HOH . 
N 5 HOH B 76 3078 127 HOH HOH . 
N 5 HOH B 77 3079 128 HOH HOH . 
N 5 HOH B 78 3080 133 HOH HOH . 
N 5 HOH B 79 3081 137 HOH HOH . 
N 5 HOH B 80 3082 138 HOH HOH . 
N 5 HOH B 81 3083 139 HOH HOH . 
N 5 HOH B 82 3084 140 HOH HOH . 
N 5 HOH B 83 3085 141 HOH HOH . 
N 5 HOH B 84 3086 142 HOH HOH . 
N 5 HOH B 85 3087 143 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P AMP . . . L 4 -98.201 21.407 -49.545 1 51.31 ? P AMP 3002 B 1 
HETATM 2 O O1P AMP . . . L 4 -97.771 20.14 -50.251 1 55.21 ? O1P AMP 3002 B 1 
HETATM 3 O O2P AMP . . . L 4 -97.705 22.696 -50.175 1 55.55 ? O2P AMP 3002 B 1 
HETATM 4 O O3P AMP . . . L 4 -99.664 21.459 -49.148 1 56.85 ? O3P AMP 3002 B 1 
HETATM 5 O O5' AMP . . . L 4 -97.419 21.298 -48.133 1 53.58 ? O5' AMP 3002 B 1 
HETATM 6 C C5' AMP . . . L 4 -96.008 21.499 -48.055 1 51.55 ? C5' AMP 3002 B 1 
HETATM 7 C C4' AMP . . . L 4 -95.383 20.604 -46.989 1 49.45 ? C4' AMP 3002 B 1 
HETATM 8 O O4' AMP . . . L 4 -94.266 19.917 -47.558 1 47.41 ? O4' AMP 3002 B 1 
HETATM 9 C C3' AMP . . . L 4 -94.857 21.42 -45.813 1 48.89 ? C3' AMP 3002 B 1 
HETATM 10 O O3' AMP . . . L 4 -95.212 20.794 -44.575 1 49.64 ? O3' AMP 3002 B 1 
HETATM 11 C C2' AMP . . . L 4 -93.351 21.407 -45.963 1 46.46 ? C2' AMP 3002 B 1 
HETATM 12 O O2' AMP . . . L 4 -92.708 21.319 -44.691 1 48.58 ? O2' AMP 3002 B 1 
HETATM 13 C C1' AMP . . . L 4 -93.071 20.182 -46.814 1 48.5 ? C1' AMP 3002 B 1 
HETATM 14 N N9 AMP . . . L 4 -91.919 20.359 -47.74 1 44.39 ? N9 AMP 3002 B 1 
HETATM 15 C C8 AMP . . . L 4 -91.331 21.51 -48.13 1 44.89 ? C8 AMP 3002 B 1 
HETATM 16 N N7 AMP . . . L 4 -90.306 21.272 -48.988 1 43.51 ? N7 AMP 3002 B 1 
HETATM 17 C C5 AMP . . . L 4 -90.224 19.941 -49.157 1 44.73 ? C5 AMP 3002 B 1 
HETATM 18 C C6 AMP . . . L 4 -89.372 19 -49.928 1 43.67 ? C6 AMP 3002 B 1 
HETATM 19 N N6 AMP . . . L 4 -88.365 19.443 -50.71 1 43.82 ? N6 AMP 3002 B 1 
HETATM 20 N N1 AMP . . . L 4 -89.628 17.676 -49.818 1 44.41 ? N1 AMP 3002 B 1 
HETATM 21 C C2 AMP . . . L 4 -90.626 17.204 -49.042 1 43.33 ? C2 AMP 3002 B 1 
HETATM 22 N N3 AMP . . . L 4 -91.439 17.996 -48.318 1 45.14 ? N3 AMP 3002 B 1 
HETATM 23 C C4 AMP . . . L 4 -91.292 19.345 -48.335 1 43.94 ? C4 AMP 3002 B 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           427 
_model_server_stats.encode_time_ms          49 
_model_server_stats.element_count           23 
#