data_2HD0 # _model_server_result.job_id XTgoRYFmMnWNA9Fi_q5GlA _model_server_result.datetime_utc '2025-08-26 09:55:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2hd0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"U","auth_seq_id":218}' # _entry.id 2HD0 # _exptl.entry_id 2HD0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 482.562 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description DECYL-BETA-D-MALTOPYRANOSIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.88 _cell.angle_gamma 90 _cell.entry_id 2HD0 _cell.length_a 109.812 _cell.length_b 68.819 _cell.length_c 125.162 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2HD0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 PISA dimeric 2 author_and_software_defined_assembly 4 PISA dimeric 2 author_and_software_defined_assembly 5 PISA dimeric 2 author_and_software_defined_assembly 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,M,N,O,P,Y,Z 1 1 C,D,Q,AA,BA 2 1 E,F,R,S,CA,DA 3 1 G,H,T,EA,FA 4 1 I,J,U,V,W,GA,HA 5 1 K,L,X,IA,JA 6 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id U _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H42 O11' _chem_comp.formula_weight 482.562 _chem_comp.id DMU _chem_comp.mon_nstd_flag . _chem_comp.name DECYL-BETA-D-MALTOPYRANOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms DECYLMALTOSIDE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C40 C37 DMU sing 131 n n C40 C43 DMU sing 132 n n C37 C34 DMU sing 133 n n C34 C31 DMU sing 134 n n C31 C28 DMU sing 135 n n C28 C25 DMU sing 136 n n C22 C25 DMU sing 137 n n C22 C19 DMU sing 138 n n O61 C57 DMU sing 139 n n O4 C7 DMU sing 140 n n C18 C19 DMU sing 141 n n C18 O16 DMU sing 142 n n O5 C6 DMU sing 143 n n O5 C4 DMU sing 144 n n C57 C4 DMU sing 145 n n C6 O16 DMU sing 146 n n C6 C1 DMU sing 147 n n C7 C5 DMU sing 148 n n C7 C8 DMU sing 149 n n C4 C3 DMU sing 150 n n O1 C10 DMU sing 151 n n O1 C9 DMU sing 152 n n C10 C5 DMU sing 153 n n C10 O7 DMU sing 154 n n C5 O3 DMU sing 155 n n O49 C1 DMU sing 156 n n C8 C9 DMU sing 157 n n C8 O2 DMU sing 158 n n C1 C2 DMU sing 159 n n C11 C9 DMU sing 160 n n C11 O6 DMU sing 161 n n C3 O7 DMU sing 162 n n C3 C2 DMU sing 163 n n C2 O55 DMU sing 164 n n C1 H1 DMU sing 165 n n C2 H2 DMU sing 166 n n C3 H3 DMU sing 167 n n C4 H4 DMU sing 168 n n C6 H5 DMU sing 169 n n C18 H6 DMU sing 170 n n C18 H7 DMU sing 171 n n C19 H8 DMU sing 172 n n C19 H9 DMU sing 173 n n C22 H10 DMU sing 174 n n C22 H11 DMU sing 175 n n C25 H12 DMU sing 176 n n C25 H13 DMU sing 177 n n C28 H14 DMU sing 178 n n C28 H15 DMU sing 179 n n C31 H16 DMU sing 180 n n C31 H17 DMU sing 181 n n C34 H18 DMU sing 182 n n C34 H19 DMU sing 183 n n C37 H20 DMU sing 184 n n C37 H21 DMU sing 185 n n C40 H22 DMU sing 186 n n C40 H23 DMU sing 187 n n C43 H24 DMU sing 188 n n C43 H25 DMU sing 189 n n C43 H26 DMU sing 190 n n O49 H27 DMU sing 191 n n O55 H28 DMU sing 192 n n C57 H29 DMU sing 193 n n C57 H30 DMU sing 194 n n O61 H31 DMU sing 195 n n C5 H32 DMU sing 196 n n C7 H33 DMU sing 197 n n C8 H34 DMU sing 198 n n C9 H35 DMU sing 199 n n C10 H36 DMU sing 200 n n O2 H37 DMU sing 201 n n O3 H38 DMU sing 202 n n O4 H39 DMU sing 203 n n C11 H40 DMU sing 204 n n C11 H41 DMU sing 205 n n O6 H42 DMU sing 206 n n # _atom_sites.entry_id 2HD0 _atom_sites.fract_transf_matrix[1][1] 0.009106 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00259 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014531 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008307 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 2 BOG A 1 218 1 BOG BOG . N 2 BOG A 1 219 3 BOG BOG . O 2 BOG A 1 220 13 BOG BOG . P 2 BOG B 1 218 6 BOG BOG . Q 2 BOG C 1 218 5 BOG BOG . R 2 BOG F 1 218 4 BOG BOG . S 2 BOG F 1 219 8 BOG BOG . T 2 BOG H 1 218 12 BOG BOG . U 3 DMU I 1 218 9 DMU DMU . V 2 BOG I 1 219 11 BOG BOG . W 2 BOG J 1 218 10 BOG BOG . X 2 BOG K 1 218 7 BOG BOG . Y 4 HOH A 1 221 4 HOH TIP . Y 4 HOH A 2 222 9 HOH TIP . Y 4 HOH A 3 223 23 HOH TIP . Y 4 HOH A 4 224 25 HOH TIP . Y 4 HOH A 5 225 46 HOH TIP . Y 4 HOH A 6 226 56 HOH TIP . Y 4 HOH A 7 227 80 HOH TIP . Y 4 HOH A 8 228 83 HOH TIP . Y 4 HOH A 9 229 87 HOH TIP . Y 4 HOH A 10 230 90 HOH TIP . Y 4 HOH A 11 231 106 HOH TIP . Y 4 HOH A 12 232 107 HOH TIP . Y 4 HOH A 13 233 108 HOH TIP . Y 4 HOH A 14 234 133 HOH TIP . Y 4 HOH A 15 235 143 HOH TIP . Y 4 HOH A 16 236 156 HOH TIP . Z 4 HOH B 1 219 5 HOH TIP . Z 4 HOH B 2 220 28 HOH TIP . Z 4 HOH B 3 221 39 HOH TIP . Z 4 HOH B 4 222 57 HOH TIP . Z 4 HOH B 5 223 59 HOH TIP . Z 4 HOH B 6 224 63 HOH TIP . Z 4 HOH B 7 225 85 HOH TIP . Z 4 HOH B 8 226 104 HOH TIP . Z 4 HOH B 9 227 150 HOH TIP . Z 4 HOH B 10 228 161 HOH TIP . AA 4 HOH C 1 219 1 HOH TIP . AA 4 HOH C 2 220 2 HOH TIP . AA 4 HOH C 3 221 3 HOH TIP . AA 4 HOH C 4 222 15 HOH TIP . AA 4 HOH C 5 223 16 HOH TIP . AA 4 HOH C 6 224 26 HOH TIP . AA 4 HOH C 7 225 27 HOH TIP . AA 4 HOH C 8 226 37 HOH TIP . AA 4 HOH C 9 227 45 HOH TIP . AA 4 HOH C 10 228 58 HOH TIP . AA 4 HOH C 11 229 89 HOH TIP . AA 4 HOH C 12 230 91 HOH TIP . AA 4 HOH C 13 231 101 HOH TIP . AA 4 HOH C 14 232 103 HOH TIP . AA 4 HOH C 15 233 105 HOH TIP . AA 4 HOH C 16 234 109 HOH TIP . AA 4 HOH C 17 235 116 HOH TIP . AA 4 HOH C 18 236 117 HOH TIP . AA 4 HOH C 19 237 131 HOH TIP . AA 4 HOH C 20 238 145 HOH TIP . AA 4 HOH C 21 239 152 HOH TIP . AA 4 HOH C 22 240 160 HOH TIP . AA 4 HOH C 23 241 171 HOH TIP . AA 4 HOH C 24 242 174 HOH TIP . BA 4 HOH D 1 218 32 HOH TIP . BA 4 HOH D 2 219 40 HOH TIP . BA 4 HOH D 3 220 53 HOH TIP . BA 4 HOH D 4 221 64 HOH TIP . BA 4 HOH D 5 222 70 HOH TIP . BA 4 HOH D 6 223 81 HOH TIP . BA 4 HOH D 7 224 93 HOH TIP . BA 4 HOH D 8 225 110 HOH TIP . BA 4 HOH D 9 226 115 HOH TIP . BA 4 HOH D 10 227 122 HOH TIP . BA 4 HOH D 11 228 125 HOH TIP . BA 4 HOH D 12 229 127 HOH TIP . BA 4 HOH D 13 230 169 HOH TIP . BA 4 HOH D 14 231 175 HOH TIP . CA 4 HOH E 1 218 10 HOH TIP . CA 4 HOH E 2 219 11 HOH TIP . CA 4 HOH E 3 220 13 HOH TIP . CA 4 HOH E 4 221 17 HOH TIP . CA 4 HOH E 5 222 33 HOH TIP . CA 4 HOH E 6 223 38 HOH TIP . CA 4 HOH E 7 224 49 HOH TIP . CA 4 HOH E 8 225 50 HOH TIP . CA 4 HOH E 9 226 54 HOH TIP . CA 4 HOH E 10 227 62 HOH TIP . CA 4 HOH E 11 228 65 HOH TIP . CA 4 HOH E 12 229 68 HOH TIP . CA 4 HOH E 13 230 69 HOH TIP . CA 4 HOH E 14 231 75 HOH TIP . CA 4 HOH E 15 232 77 HOH TIP . CA 4 HOH E 16 233 79 HOH TIP . CA 4 HOH E 17 234 82 HOH TIP . CA 4 HOH E 18 235 84 HOH TIP . CA 4 HOH E 19 236 86 HOH TIP . CA 4 HOH E 20 237 111 HOH TIP . CA 4 HOH E 21 238 114 HOH TIP . CA 4 HOH E 22 239 121 HOH TIP . CA 4 HOH E 23 240 129 HOH TIP . CA 4 HOH E 24 241 130 HOH TIP . CA 4 HOH E 25 242 147 HOH TIP . CA 4 HOH E 26 243 149 HOH TIP . CA 4 HOH E 27 244 154 HOH TIP . CA 4 HOH E 28 245 158 HOH TIP . CA 4 HOH E 29 246 172 HOH TIP . DA 4 HOH F 1 220 14 HOH TIP . DA 4 HOH F 2 221 30 HOH TIP . DA 4 HOH F 3 222 31 HOH TIP . DA 4 HOH F 4 223 34 HOH TIP . DA 4 HOH F 5 224 60 HOH TIP . DA 4 HOH F 6 225 76 HOH TIP . DA 4 HOH F 7 226 95 HOH TIP . DA 4 HOH F 8 227 97 HOH TIP . DA 4 HOH F 9 228 100 HOH TIP . DA 4 HOH F 10 229 113 HOH TIP . DA 4 HOH F 11 230 144 HOH TIP . DA 4 HOH F 12 231 146 HOH TIP . DA 4 HOH F 13 232 163 HOH TIP . EA 4 HOH G 1 218 6 HOH TIP . EA 4 HOH G 2 219 7 HOH TIP . EA 4 HOH G 3 220 8 HOH TIP . EA 4 HOH G 4 221 19 HOH TIP . EA 4 HOH G 5 222 21 HOH TIP . EA 4 HOH G 6 223 22 HOH TIP . EA 4 HOH G 7 224 35 HOH TIP . EA 4 HOH G 8 225 52 HOH TIP . EA 4 HOH G 9 226 92 HOH TIP . EA 4 HOH G 10 227 118 HOH TIP . EA 4 HOH G 11 228 123 HOH TIP . EA 4 HOH G 12 229 132 HOH TIP . EA 4 HOH G 13 230 134 HOH TIP . EA 4 HOH G 14 231 141 HOH TIP . EA 4 HOH G 15 232 170 HOH TIP . FA 4 HOH H 1 219 20 HOH TIP . FA 4 HOH H 2 220 24 HOH TIP . FA 4 HOH H 3 221 29 HOH TIP . FA 4 HOH H 4 222 48 HOH TIP . FA 4 HOH H 5 223 55 HOH TIP . FA 4 HOH H 6 224 73 HOH TIP . FA 4 HOH H 7 225 74 HOH TIP . FA 4 HOH H 8 226 94 HOH TIP . FA 4 HOH H 9 227 124 HOH TIP . FA 4 HOH H 10 228 126 HOH TIP . FA 4 HOH H 11 229 128 HOH TIP . FA 4 HOH H 12 230 148 HOH TIP . FA 4 HOH H 13 231 155 HOH TIP . GA 4 HOH I 1 220 42 HOH TIP . GA 4 HOH I 2 221 43 HOH TIP . GA 4 HOH I 3 222 44 HOH TIP . GA 4 HOH I 4 223 51 HOH TIP . GA 4 HOH I 5 224 66 HOH TIP . GA 4 HOH I 6 225 67 HOH TIP . GA 4 HOH I 7 226 72 HOH TIP . GA 4 HOH I 8 227 98 HOH TIP . GA 4 HOH I 9 228 119 HOH TIP . GA 4 HOH I 10 229 135 HOH TIP . GA 4 HOH I 11 230 139 HOH TIP . GA 4 HOH I 12 231 142 HOH TIP . GA 4 HOH I 13 232 162 HOH TIP . GA 4 HOH I 14 233 164 HOH TIP . HA 4 HOH J 1 219 12 HOH TIP . HA 4 HOH J 2 220 41 HOH TIP . HA 4 HOH J 3 221 47 HOH TIP . HA 4 HOH J 4 222 112 HOH TIP . HA 4 HOH J 5 223 140 HOH TIP . HA 4 HOH J 6 224 151 HOH TIP . HA 4 HOH J 7 225 166 HOH TIP . HA 4 HOH J 8 226 176 HOH TIP . IA 4 HOH K 1 219 18 HOH TIP . IA 4 HOH K 2 220 36 HOH TIP . IA 4 HOH K 3 221 71 HOH TIP . IA 4 HOH K 4 222 78 HOH TIP . IA 4 HOH K 5 223 96 HOH TIP . IA 4 HOH K 6 224 99 HOH TIP . IA 4 HOH K 7 225 120 HOH TIP . IA 4 HOH K 8 226 136 HOH TIP . IA 4 HOH K 9 227 138 HOH TIP . IA 4 HOH K 10 228 153 HOH TIP . IA 4 HOH K 11 229 159 HOH TIP . IA 4 HOH K 12 230 165 HOH TIP . IA 4 HOH K 13 231 167 HOH TIP . JA 4 HOH L 1 218 61 HOH TIP . JA 4 HOH L 2 219 88 HOH TIP . JA 4 HOH L 3 220 102 HOH TIP . JA 4 HOH L 4 221 137 HOH TIP . JA 4 HOH L 5 222 157 HOH TIP . JA 4 HOH L 6 223 168 HOH TIP . JA 4 HOH L 7 224 173 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DMU . . . U 3 98.46 23.561 57.423 1 35.49 ? C1 DMU 218 I 1 HETATM 2 C C2 DMU . . . U 3 99.139 22.616 58.444 1 36.44 ? C2 DMU 218 I 1 HETATM 3 C C3 DMU . . . U 3 98.784 21.221 58.985 1 34.54 ? C3 DMU 218 I 1 HETATM 4 C C4 DMU . . . U 3 97.48 20.847 58.23 1 33.55 ? C4 DMU 218 I 1 HETATM 5 O O5 DMU . . . U 3 96.887 21.591 57.368 1 33.01 ? O5 DMU 218 I 1 HETATM 6 C C6 DMU . . . U 3 97.189 22.79 56.911 1 33.48 ? C6 DMU 218 I 1 HETATM 7 O O7 DMU . . . U 3 99.682 20.356 58.967 1 34.67 ? O7 DMU 218 I 1 HETATM 8 O O16 DMU . . . U 3 96.468 23.398 56.033 1 32.06 ? O16 DMU 218 I 1 HETATM 9 C C18 DMU . . . U 3 95.424 22.921 55.489 1 32.61 ? C18 DMU 218 I 1 HETATM 10 C C19 DMU . . . U 3 94.211 23.822 55.477 1 29.24 ? C19 DMU 218 I 1 HETATM 11 C C22 DMU . . . U 3 93.119 23.193 54.665 1 30.54 ? C22 DMU 218 I 1 HETATM 12 C C25 DMU . . . U 3 91.885 24.042 54.627 1 31.65 ? C25 DMU 218 I 1 HETATM 13 C C28 DMU . . . U 3 91.406 24.252 53.226 1 32.32 ? C28 DMU 218 I 1 HETATM 14 C C31 DMU . . . U 3 89.901 24.364 53.22 1 35.46 ? C31 DMU 218 I 1 HETATM 15 C C34 DMU . . . U 3 89.429 25.815 53.14 1 36.23 ? C34 DMU 218 I 1 HETATM 16 C C37 DMU . . . U 3 88.626 26.217 54.369 1 35.15 ? C37 DMU 218 I 1 HETATM 17 C C40 DMU . . . U 3 87.378 27.016 53.99 1 36.78 ? C40 DMU 218 I 1 HETATM 18 C C43 DMU . . . U 3 86.998 28.012 55.101 1 35.47 ? C43 DMU 218 I 1 HETATM 19 O O49 DMU . . . U 3 99.352 23.884 56.344 1 38.07 ? O49 DMU 218 I 1 HETATM 20 O O55 DMU . . . U 3 100.343 23.151 59.015 1 38.3 ? O55 DMU 218 I 1 HETATM 21 C C57 DMU . . . U 3 96.957 19.468 58.638 1 32.44 ? C57 DMU 218 I 1 HETATM 22 O O61 DMU . . . U 3 96.719 18.666 57.506 1 38.07 ? O61 DMU 218 I 1 HETATM 23 C C5 DMU . . . U 3 101.914 19.828 59.72 1 36.22 ? C5 DMU 218 I 1 HETATM 24 C C7 DMU . . . U 3 102.793 18.576 59.452 1 36.3 ? C7 DMU 218 I 1 HETATM 25 C C8 DMU . . . U 3 101.813 17.467 59.972 1 35.42 ? C8 DMU 218 I 1 HETATM 26 C C9 DMU . . . U 3 100.372 17.795 60.533 1 35.69 ? C9 DMU 218 I 1 HETATM 27 O O1 DMU . . . U 3 99.885 18.996 60.63 1 36.37 ? O1 DMU 218 I 1 HETATM 28 C C10 DMU . . . U 3 100.372 20.03 59.956 1 36.91 ? C10 DMU 218 I 1 HETATM 29 O O2 DMU . . . U 3 101.729 16.438 58.984 1 37.76 ? O2 DMU 218 I 1 HETATM 30 O O3 DMU . . . U 3 102.643 21.052 59.762 1 37.41 ? O3 DMU 218 I 1 HETATM 31 O O4 DMU . . . U 3 104.002 18.605 60.216 1 39.34 ? O4 DMU 218 I 1 HETATM 32 C C11 DMU . . . U 3 99.591 16.546 60.957 1 36.67 ? C11 DMU 218 I 1 HETATM 33 O O6 DMU . . . U 3 98.206 16.828 61.1 1 34.85 ? O6 DMU 218 I 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 33 #