data_2HDN # _model_server_result.job_id ZVGhFtHqRgdO8RRvD3_LIQ _model_server_result.datetime_utc '2024-11-09 01:56:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2hdn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":2999}' # _entry.id 2HDN # _exptl.entry_id 2HDN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.38 _cell.angle_gamma 90 _cell.entry_id 2HDN _cell.length_a 69.71 _cell.length_b 156.06 _cell.length_c 134.83 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2HDN _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 PISA dimeric 2 author_and_software_defined_assembly 4 PISA dimeric 2 author_and_software_defined_assembly 5 PISA dimeric 2 author_and_software_defined_assembly 6 PISA tetrameric 4 software_defined_assembly 7 PISA tetrameric 4 software_defined_assembly 8 PISA tetrameric 4 software_defined_assembly 9 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,M,N,O,EA,FA 1 1 C,D,P,Q,R,GA,HA 2 1 E,F,S,T,U,IA,JA 3 1 G,H,V,W,X,KA,LA 4 1 I,J,Y,Z,AA,MA,NA 5 1 K,L,BA,CA,DA,OA,PA 6 1 A,B,C,D,M,N,O,P,Q,R,EA,FA,GA,HA 7 1 I,J,K,L,Y,Z,AA,BA,CA,DA,MA,NA,OA,PA 8 1 E,F,G,H,S,T,U,V,W,X,IA,JA,KA,LA 9 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 N N N ? 4 Q N N ? 4 T N N ? 4 W N N ? 4 Z N N ? 4 CA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 18 A THR 25 1_555 M MG MG . A MG 1998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc2 M MG MG . A MG 1998 1_555 FA O HOH . B HOH 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? metalc ? metalc3 M MG MG . A MG 1998 1_555 FA O HOH . B HOH 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc4 M MG MG . A MG 1998 1_555 O O12 TAC . B TAC 1888 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc5 M MG MG . A MG 1998 1_555 O O11 TAC . B TAC 1888 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc6 M MG MG . A MG 1998 1_555 N O2B GDP . B GDP 1999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? metalc ? metalc7 C OG1 THR 18 C THR 25 1_555 P MG MG . C MG 2998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? metalc ? metalc8 P MG MG . C MG 2998 1_555 HA O HOH . D HOH 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc9 P MG MG . C MG 2998 1_555 HA O HOH . D HOH 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc10 P MG MG . C MG 2998 1_555 R O11 TAC . D TAC 2888 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc11 P MG MG . C MG 2998 1_555 R O12 TAC . D TAC 2888 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.936 ? metalc ? metalc12 P MG MG . C MG 2998 1_555 Q O2B GDP . D GDP 2999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? metalc ? metalc13 E OG1 THR 18 E THR 25 1_555 S MG MG . E MG 3998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc14 S MG MG . E MG 3998 1_555 JA O HOH . F HOH 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc15 S MG MG . E MG 3998 1_555 JA O HOH . F HOH 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc16 S MG MG . E MG 3998 1_555 U O12 TAC . F TAC 3888 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? metalc ? metalc17 S MG MG . E MG 3998 1_555 U O11 TAC . F TAC 3888 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc18 S MG MG . E MG 3998 1_555 T O2B GDP . F GDP 3999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc19 G OG1 THR 18 G THR 25 1_555 V MG MG . G MG 4998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc20 V MG MG . G MG 4998 1_555 LA O HOH . H HOH 4001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc21 V MG MG . G MG 4998 1_555 LA O HOH . H HOH 4002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? metalc ? metalc22 V MG MG . G MG 4998 1_555 X O11 TAC . H TAC 4888 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? metalc ? metalc23 V MG MG . G MG 4998 1_555 X O12 TAC . H TAC 4888 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc24 V MG MG . G MG 4998 1_555 W O2B GDP . H GDP 4999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc25 I OG1 THR 18 I THR 25 1_555 Y MG MG . I MG 5998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? metalc ? metalc26 Y MG MG . I MG 5998 1_555 NA O HOH . J HOH 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? metalc ? metalc27 Y MG MG . I MG 5998 1_555 NA O HOH . J HOH 5002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc28 Y MG MG . I MG 5998 1_555 AA O12 TAC . J TAC 5888 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.964 ? metalc ? metalc29 Y MG MG . I MG 5998 1_555 AA O11 TAC . J TAC 5888 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? metalc ? metalc30 Y MG MG . I MG 5998 1_555 Z O2B GDP . J GDP 5999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc31 K OG1 THR 18 K THR 25 1_555 BA MG MG . K MG 6998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc32 BA MG MG . K MG 6998 1_555 PA O HOH . L HOH 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? metalc ? metalc33 BA MG MG . K MG 6998 1_555 PA O HOH . L HOH 6002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? metalc ? metalc34 BA MG MG . K MG 6998 1_555 DA O11 TAC . L TAC 6888 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc35 BA MG MG . K MG 6998 1_555 DA O12 TAC . L TAC 6888 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.974 ? metalc ? metalc36 BA MG MG . K MG 6998 1_555 CA O2B GDP . L GDP 6999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 83 n n PB O2B GDP sing 84 n n PB O3B GDP sing 85 n n PB O3A GDP sing 86 n n O2B HOB2 GDP sing 87 n n O3B HOB3 GDP sing 88 n n O3A PA GDP sing 89 n n PA O1A GDP doub 90 n n PA O2A GDP sing 91 n n PA O5' GDP sing 92 n n O2A HOA2 GDP sing 93 n n O5' C5' GDP sing 94 n n C5' C4' GDP sing 95 n n C5' H5' GDP sing 96 n n C5' "H5''" GDP sing 97 n n C4' O4' GDP sing 98 n n C4' C3' GDP sing 99 n n C4' H4' GDP sing 100 n n O4' C1' GDP sing 101 n n C3' O3' GDP sing 102 n n C3' C2' GDP sing 103 n n C3' H3' GDP sing 104 n n O3' HO3' GDP sing 105 n n C2' O2' GDP sing 106 n n C2' C1' GDP sing 107 n n C2' H2' GDP sing 108 n n O2' HO2' GDP sing 109 n n C1' N9 GDP sing 110 n n C1' H1' GDP sing 111 n n N9 C8 GDP sing 112 n y N9 C4 GDP sing 113 n y C8 N7 GDP doub 114 n y C8 H8 GDP sing 115 n n N7 C5 GDP sing 116 n y C5 C6 GDP sing 117 n n C5 C4 GDP doub 118 n y C6 O6 GDP doub 119 n n C6 N1 GDP sing 120 n n N1 C2 GDP sing 121 n n N1 HN1 GDP sing 122 n n C2 N2 GDP sing 123 n n C2 N3 GDP doub 124 n n N2 HN21 GDP sing 125 n n N2 HN22 GDP sing 126 n n N3 C4 GDP sing 127 n n # _atom_sites.entry_id 2HDN _atom_sites.fract_transf_matrix[1][1] 0.014345 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001351 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006408 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00745 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 3 MG A 1 1998 1998 MG MG . N 4 GDP B 1 1999 1999 GDP GDP . O 5 TAC B 1 1888 1888 TAC TAC . P 3 MG C 1 2998 2998 MG MG . Q 4 GDP D 1 2999 2999 GDP GDP . R 5 TAC D 1 2888 2888 TAC TAC . S 3 MG E 1 3998 3998 MG MG . T 4 GDP F 1 3999 3999 GDP GDP . U 5 TAC F 1 3888 3888 TAC TAC . V 3 MG G 1 4998 4998 MG MG . W 4 GDP H 1 4999 4999 GDP GDP . X 5 TAC H 1 4888 4888 TAC TAC . Y 3 MG I 1 5998 5998 MG MG . Z 4 GDP J 1 5999 5999 GDP GDP . AA 5 TAC J 1 5888 5888 TAC TAC . BA 3 MG K 1 6998 6998 MG MG . CA 4 GDP L 1 6999 6999 GDP GDP . DA 5 TAC L 1 6888 6888 TAC TAC . EA 6 HOH A 1 1005 1005 HOH HOH . EA 6 HOH A 2 1032 1032 HOH HOH . EA 6 HOH A 3 1033 1033 HOH HOH . EA 6 HOH A 4 1057 1057 HOH HOH . FA 6 HOH B 1 1001 1001 HOH HOH . FA 6 HOH B 2 1002 1002 HOH HOH . FA 6 HOH B 3 1003 1003 HOH HOH . FA 6 HOH B 4 1004 1004 HOH HOH . FA 6 HOH B 5 1006 1006 HOH HOH . FA 6 HOH B 6 1007 1007 HOH HOH . FA 6 HOH B 7 1008 1008 HOH HOH . FA 6 HOH B 8 1009 1009 HOH HOH . FA 6 HOH B 9 1011 1011 HOH HOH . FA 6 HOH B 10 1012 1012 HOH HOH . FA 6 HOH B 11 1013 1013 HOH HOH . FA 6 HOH B 12 1016 1016 HOH HOH . FA 6 HOH B 13 1018 1018 HOH HOH . FA 6 HOH B 14 1019 1019 HOH HOH . FA 6 HOH B 15 1024 1024 HOH HOH . FA 6 HOH B 16 1026 1026 HOH HOH . FA 6 HOH B 17 1027 1027 HOH HOH . FA 6 HOH B 18 1029 1029 HOH HOH . FA 6 HOH B 19 1030 1030 HOH HOH . FA 6 HOH B 20 1031 1031 HOH HOH . FA 6 HOH B 21 1035 1035 HOH HOH . FA 6 HOH B 22 1038 1038 HOH HOH . FA 6 HOH B 23 1039 1039 HOH HOH . FA 6 HOH B 24 1041 1041 HOH HOH . FA 6 HOH B 25 1044 1044 HOH HOH . FA 6 HOH B 26 1045 1045 HOH HOH . FA 6 HOH B 27 1049 1049 HOH HOH . FA 6 HOH B 28 1050 1050 HOH HOH . FA 6 HOH B 29 1053 1053 HOH HOH . FA 6 HOH B 30 1054 1054 HOH HOH . FA 6 HOH B 31 1055 1055 HOH HOH . FA 6 HOH B 32 1058 1058 HOH HOH . FA 6 HOH B 33 1059 1059 HOH HOH . FA 6 HOH B 34 1062 1062 HOH HOH . FA 6 HOH B 35 1068 1068 HOH HOH . FA 6 HOH B 36 1069 1069 HOH HOH . FA 6 HOH B 37 1070 1070 HOH HOH . FA 6 HOH B 38 1072 1072 HOH HOH . FA 6 HOH B 39 1073 1073 HOH HOH . FA 6 HOH B 40 1075 1075 HOH HOH . FA 6 HOH B 41 1077 1077 HOH HOH . FA 6 HOH B 42 1079 1079 HOH HOH . FA 6 HOH B 43 1080 1080 HOH HOH . FA 6 HOH B 44 1081 1081 HOH HOH . FA 6 HOH B 45 1082 1082 HOH HOH . FA 6 HOH B 46 1083 1083 HOH HOH . FA 6 HOH B 47 1092 1092 HOH HOH . FA 6 HOH B 48 1095 1095 HOH HOH . FA 6 HOH B 49 1101 1101 HOH HOH . FA 6 HOH B 50 1103 1103 HOH HOH . FA 6 HOH B 51 1104 1104 HOH HOH . FA 6 HOH B 52 1106 1106 HOH HOH . FA 6 HOH B 53 1111 1111 HOH HOH . FA 6 HOH B 54 1117 1117 HOH HOH . GA 6 HOH C 1 2003 2003 HOH HOH . GA 6 HOH C 2 2005 2005 HOH HOH . GA 6 HOH C 3 2040 2040 HOH HOH . HA 6 HOH D 1 2001 2001 HOH HOH . HA 6 HOH D 2 2002 2002 HOH HOH . HA 6 HOH D 3 2004 2004 HOH HOH . HA 6 HOH D 4 2006 2006 HOH HOH . HA 6 HOH D 5 2007 2007 HOH HOH . HA 6 HOH D 6 2008 2008 HOH HOH . HA 6 HOH D 7 2012 2012 HOH HOH . HA 6 HOH D 8 2013 2013 HOH HOH . HA 6 HOH D 9 2016 2016 HOH HOH . HA 6 HOH D 10 2020 2020 HOH HOH . HA 6 HOH D 11 2024 2024 HOH HOH . HA 6 HOH D 12 2027 2027 HOH HOH . HA 6 HOH D 13 2028 2028 HOH HOH . HA 6 HOH D 14 2034 2034 HOH HOH . HA 6 HOH D 15 2035 2035 HOH HOH . HA 6 HOH D 16 2038 2038 HOH HOH . HA 6 HOH D 17 2048 2048 HOH HOH . HA 6 HOH D 18 2051 2051 HOH HOH . HA 6 HOH D 19 2055 2055 HOH HOH . HA 6 HOH D 20 2059 2059 HOH HOH . HA 6 HOH D 21 2064 2064 HOH HOH . HA 6 HOH D 22 2068 2068 HOH HOH . HA 6 HOH D 23 2072 2072 HOH HOH . HA 6 HOH D 24 2074 2074 HOH HOH . HA 6 HOH D 25 2083 2083 HOH HOH . HA 6 HOH D 26 2085 2085 HOH HOH . HA 6 HOH D 27 2087 2087 HOH HOH . HA 6 HOH D 28 2089 2089 HOH HOH . HA 6 HOH D 29 2108 2108 HOH HOH . HA 6 HOH D 30 2112 2112 HOH HOH . IA 6 HOH E 1 3005 3005 HOH HOH . JA 6 HOH F 1 3001 3001 HOH HOH . JA 6 HOH F 2 3002 3002 HOH HOH . JA 6 HOH F 3 3003 3003 HOH HOH . JA 6 HOH F 4 3004 3004 HOH HOH . JA 6 HOH F 5 3006 3006 HOH HOH . JA 6 HOH F 6 3007 3007 HOH HOH . JA 6 HOH F 7 3008 3008 HOH HOH . JA 6 HOH F 8 3010 3010 HOH HOH . JA 6 HOH F 9 3011 3011 HOH HOH . JA 6 HOH F 10 3014 3014 HOH HOH . JA 6 HOH F 11 3015 3015 HOH HOH . JA 6 HOH F 12 3016 3016 HOH HOH . JA 6 HOH F 13 3020 3020 HOH HOH . JA 6 HOH F 14 3021 3021 HOH HOH . JA 6 HOH F 15 3024 3024 HOH HOH . JA 6 HOH F 16 3025 3025 HOH HOH . JA 6 HOH F 17 3038 3038 HOH HOH . JA 6 HOH F 18 3048 3048 HOH HOH . JA 6 HOH F 19 3052 3052 HOH HOH . JA 6 HOH F 20 3054 3054 HOH HOH . JA 6 HOH F 21 3061 3061 HOH HOH . JA 6 HOH F 22 3063 3063 HOH HOH . JA 6 HOH F 23 3064 3064 HOH HOH . JA 6 HOH F 24 3066 3066 HOH HOH . JA 6 HOH F 25 3091 3091 HOH HOH . JA 6 HOH F 26 3098 3098 HOH HOH . JA 6 HOH F 27 3107 3107 HOH HOH . JA 6 HOH F 28 3114 3114 HOH HOH . JA 6 HOH F 29 3118 3118 HOH HOH . JA 6 HOH F 30 5047 5047 HOH HOH . KA 6 HOH G 1 4006 4006 HOH HOH . KA 6 HOH G 2 4022 4022 HOH HOH . KA 6 HOH G 3 4032 4032 HOH HOH . KA 6 HOH G 4 4057 4057 HOH HOH . LA 6 HOH H 1 4001 4001 HOH HOH . LA 6 HOH H 2 4002 4002 HOH HOH . LA 6 HOH H 3 4003 4003 HOH HOH . LA 6 HOH H 4 4004 4004 HOH HOH . LA 6 HOH H 5 4005 4005 HOH HOH . LA 6 HOH H 6 4007 4007 HOH HOH . LA 6 HOH H 7 4009 4009 HOH HOH . LA 6 HOH H 8 4010 4010 HOH HOH . LA 6 HOH H 9 4012 4012 HOH HOH . LA 6 HOH H 10 4015 4015 HOH HOH . LA 6 HOH H 11 4018 4018 HOH HOH . LA 6 HOH H 12 4023 4023 HOH HOH . LA 6 HOH H 13 4026 4026 HOH HOH . LA 6 HOH H 14 4027 4027 HOH HOH . LA 6 HOH H 15 4035 4035 HOH HOH . LA 6 HOH H 16 4038 4038 HOH HOH . LA 6 HOH H 17 4049 4049 HOH HOH . LA 6 HOH H 18 4050 4050 HOH HOH . LA 6 HOH H 19 4052 4052 HOH HOH . LA 6 HOH H 20 4054 4054 HOH HOH . LA 6 HOH H 21 4060 4060 HOH HOH . LA 6 HOH H 22 4063 4063 HOH HOH . LA 6 HOH H 23 4077 4077 HOH HOH . LA 6 HOH H 24 4107 4107 HOH HOH . LA 6 HOH H 25 4110 4110 HOH HOH . LA 6 HOH H 26 4111 4111 HOH HOH . LA 6 HOH H 27 4115 4115 HOH HOH . LA 6 HOH H 28 4116 4116 HOH HOH . MA 6 HOH I 1 5004 5004 HOH HOH . MA 6 HOH I 2 5005 5005 HOH HOH . MA 6 HOH I 3 5032 5032 HOH HOH . NA 6 HOH J 1 5001 5001 HOH HOH . NA 6 HOH J 2 5002 5002 HOH HOH . NA 6 HOH J 3 5003 5003 HOH HOH . NA 6 HOH J 4 5006 5006 HOH HOH . NA 6 HOH J 5 5007 5007 HOH HOH . NA 6 HOH J 6 5008 5008 HOH HOH . NA 6 HOH J 7 5010 5010 HOH HOH . NA 6 HOH J 8 5012 5012 HOH HOH . NA 6 HOH J 9 5013 5013 HOH HOH . NA 6 HOH J 10 5014 5014 HOH HOH . NA 6 HOH J 11 5015 5015 HOH HOH . NA 6 HOH J 12 5017 5017 HOH HOH . NA 6 HOH J 13 5018 5018 HOH HOH . NA 6 HOH J 14 5019 5019 HOH HOH . NA 6 HOH J 15 5025 5025 HOH HOH . NA 6 HOH J 16 5026 5026 HOH HOH . NA 6 HOH J 17 5027 5027 HOH HOH . NA 6 HOH J 18 5042 5042 HOH HOH . NA 6 HOH J 19 5043 5043 HOH HOH . NA 6 HOH J 20 5044 5044 HOH HOH . NA 6 HOH J 21 5045 5045 HOH HOH . NA 6 HOH J 22 5048 5048 HOH HOH . NA 6 HOH J 23 5050 5050 HOH HOH . NA 6 HOH J 24 5052 5052 HOH HOH . NA 6 HOH J 25 5054 5054 HOH HOH . NA 6 HOH J 26 5055 5055 HOH HOH . NA 6 HOH J 27 5056 5056 HOH HOH . NA 6 HOH J 28 5061 5061 HOH HOH . NA 6 HOH J 29 5062 5062 HOH HOH . NA 6 HOH J 30 5063 5063 HOH HOH . NA 6 HOH J 31 5069 5069 HOH HOH . NA 6 HOH J 32 5070 5070 HOH HOH . NA 6 HOH J 33 5071 5071 HOH HOH . NA 6 HOH J 34 5075 5075 HOH HOH . NA 6 HOH J 35 5076 5076 HOH HOH . NA 6 HOH J 36 5079 5079 HOH HOH . NA 6 HOH J 37 5088 5088 HOH HOH . NA 6 HOH J 38 5090 5090 HOH HOH . NA 6 HOH J 39 5094 5094 HOH HOH . NA 6 HOH J 40 5096 5096 HOH HOH . NA 6 HOH J 41 5097 5097 HOH HOH . NA 6 HOH J 42 5100 5100 HOH HOH . NA 6 HOH J 43 5102 5102 HOH HOH . NA 6 HOH J 44 5105 5105 HOH HOH . NA 6 HOH J 45 5109 5109 HOH HOH . OA 6 HOH K 1 6005 6005 HOH HOH . OA 6 HOH K 2 6032 6032 HOH HOH . OA 6 HOH K 3 6057 6057 HOH HOH . OA 6 HOH K 4 6074 6074 HOH HOH . OA 6 HOH K 5 6099 6099 HOH HOH . PA 6 HOH L 1 6001 6001 HOH HOH . PA 6 HOH L 2 6002 6002 HOH HOH . PA 6 HOH L 3 6003 6003 HOH HOH . PA 6 HOH L 4 6004 6004 HOH HOH . PA 6 HOH L 5 6006 6006 HOH HOH . PA 6 HOH L 6 6007 6007 HOH HOH . PA 6 HOH L 7 6008 6008 HOH HOH . PA 6 HOH L 8 6009 6009 HOH HOH . PA 6 HOH L 9 6012 6012 HOH HOH . PA 6 HOH L 10 6013 6013 HOH HOH . PA 6 HOH L 11 6014 6014 HOH HOH . PA 6 HOH L 12 6016 6016 HOH HOH . PA 6 HOH L 13 6018 6018 HOH HOH . PA 6 HOH L 14 6024 6024 HOH HOH . PA 6 HOH L 15 6038 6038 HOH HOH . PA 6 HOH L 16 6045 6045 HOH HOH . PA 6 HOH L 17 6046 6046 HOH HOH . PA 6 HOH L 18 6048 6048 HOH HOH . PA 6 HOH L 19 6050 6050 HOH HOH . PA 6 HOH L 20 6054 6054 HOH HOH . PA 6 HOH L 21 6055 6055 HOH HOH . PA 6 HOH L 22 6058 6058 HOH HOH . PA 6 HOH L 23 6059 6059 HOH HOH . PA 6 HOH L 24 6062 6062 HOH HOH . PA 6 HOH L 25 6065 6065 HOH HOH . PA 6 HOH L 26 6066 6066 HOH HOH . PA 6 HOH L 27 6072 6072 HOH HOH . PA 6 HOH L 28 6075 6075 HOH HOH . PA 6 HOH L 29 6077 6077 HOH HOH . PA 6 HOH L 30 6078 6078 HOH HOH . PA 6 HOH L 31 6083 6083 HOH HOH . PA 6 HOH L 32 6084 6084 HOH HOH . PA 6 HOH L 33 6086 6086 HOH HOH . PA 6 HOH L 34 6091 6091 HOH HOH . PA 6 HOH L 35 6097 6097 HOH HOH . PA 6 HOH L 36 6101 6101 HOH HOH . PA 6 HOH L 37 6113 6113 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . Q 4 43.05 19.991 90.72 1 32.66 ? PB GDP 2999 D 1 HETATM 2 O O1B GDP . . . Q 4 41.825 19.711 91.474 1 35.63 ? O1B GDP 2999 D 1 HETATM 3 O O2B GDP . . . Q 4 44.078 20.432 91.697 1 18.8 ? O2B GDP 2999 D 1 HETATM 4 O O3B GDP . . . Q 4 42.717 20.953 89.65 1 28.21 ? O3B GDP 2999 D 1 HETATM 5 O O3A GDP . . . Q 4 43.543 18.658 89.993 1 34.71 ? O3A GDP 2999 D 1 HETATM 6 P PA GDP . . . Q 4 44.764 17.767 90.518 1 41.37 ? PA GDP 2999 D 1 HETATM 7 O O1A GDP . . . Q 4 46.074 18.422 90.257 1 43.67 ? O1A GDP 2999 D 1 HETATM 8 O O2A GDP . . . Q 4 44.69 17.388 91.96 1 27.17 ? O2A GDP 2999 D 1 HETATM 9 O O5' GDP . . . Q 4 44.653 16.544 89.517 1 45.25 ? O5' GDP 2999 D 1 HETATM 10 C C5' GDP . . . Q 4 43.545 15.645 89.534 1 49.39 ? C5' GDP 2999 D 1 HETATM 11 C C4' GDP . . . Q 4 44.039 14.259 89.191 1 49.55 ? C4' GDP 2999 D 1 HETATM 12 O O4' GDP . . . Q 4 44.324 14.181 87.785 1 50.99 ? O4' GDP 2999 D 1 HETATM 13 C C3' GDP . . . Q 4 45.314 13.944 89.961 1 53.05 ? C3' GDP 2999 D 1 HETATM 14 O O3' GDP . . . Q 4 44.99 12.753 90.661 1 57.5 ? O3' GDP 2999 D 1 HETATM 15 C C2' GDP . . . Q 4 46.332 13.508 88.915 1 54.88 ? C2' GDP 2999 D 1 HETATM 16 O O2' GDP . . . Q 4 46.977 12.284 89.115 1 61.39 ? O2' GDP 2999 D 1 HETATM 17 C C1' GDP . . . Q 4 45.583 13.598 87.592 1 57.92 ? C1' GDP 2999 D 1 HETATM 18 N N9 GDP . . . Q 4 46.316 14.344 86.584 1 65.33 ? N9 GDP 2999 D 1 HETATM 19 C C8 GDP . . . Q 4 46.797 15.632 86.663 1 64.85 ? C8 GDP 2999 D 1 HETATM 20 N N7 GDP . . . Q 4 47.421 16.007 85.582 1 69.34 ? N7 GDP 2999 D 1 HETATM 21 C C5 GDP . . . Q 4 47.347 14.9 84.74 1 71.75 ? C5 GDP 2999 D 1 HETATM 22 C C6 GDP . . . Q 4 47.849 14.705 83.428 1 74.65 ? C6 GDP 2999 D 1 HETATM 23 O O6 GDP . . . Q 4 48.477 15.499 82.71 1 76.15 ? O6 GDP 2999 D 1 HETATM 24 N N1 GDP . . . Q 4 47.556 13.428 82.959 1 79.29 ? N1 GDP 2999 D 1 HETATM 25 C C2 GDP . . . Q 4 46.873 12.464 83.656 1 77.81 ? C2 GDP 2999 D 1 HETATM 26 N N2 GDP . . . Q 4 46.703 11.289 83.032 1 78.99 ? N2 GDP 2999 D 1 HETATM 27 N N3 GDP . . . Q 4 46.397 12.638 84.87 1 74.52 ? N3 GDP 2999 D 1 HETATM 28 C C4 GDP . . . Q 4 46.668 13.869 85.349 1 69.94 ? C4 GDP 2999 D 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 36 _model_server_stats.query_time_ms 257 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #