data_2HEV # _model_server_result.job_id 2aTcbpQR5mpuaO1l1WiarQ _model_server_result.datetime_utc '2025-02-05 04:42:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2hev # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":200}' # _entry.id 2HEV # _exptl.entry_id 2HEV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 221.208 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 2-acetamido-2-deoxy-beta-D-glucopyranose _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2HEV _cell.length_a 111.903 _cell.length_b 111.903 _cell.length_c 233.238 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2HEV _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 55.9515 96.910841 0 3 'crystal symmetry operation' 3_565 -x+y,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -55.9515 96.910841 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 51 F CYS 97 1_555 A SG CYS 135 F CYS 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 B SG CYS 7 R CYS 31 1_555 B SG CYS 18 R CYS 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 B SG CYS 19 R CYS 43 1_555 B SG CYS 32 R CYS 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf4 B SG CYS 22 R CYS 46 1_555 B SG CYS 40 R CYS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf5 B SG CYS 43 R CYS 67 1_555 B SG CYS 57 R CYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf6 B SG CYS 60 R CYS 84 1_555 B SG CYS 75 R CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? disulf ? disulf7 B SG CYS 63 R CYS 87 1_555 B SG CYS 83 R CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf8 B SG CYS 85 R CYS 109 1_555 B SG CYS 101 R CYS 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf9 B SG CYS 104 R CYS 128 1_555 B SG CYS 117 R CYS 141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf10 B SG CYS 123 R CYS 147 1_555 B SG CYS 142 R CYS 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? covale ? covale1 A ND2 ASN 106 F ASN 152 1_555 C C1 NAG . F NAG 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? covale ? covale2 B ND2 ASN 136 R ASN 160 1_555 D C1 NAG . R NAG 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? # _chem_comp.formula 'C8 H15 N O6' _chem_comp.formula_weight 221.208 _chem_comp.id NAG _chem_comp.mon_nstd_flag . _chem_comp.name 2-acetamido-2-deoxy-beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 NAG sing 237 n n C1 O1 NAG sing 238 n n C1 O5 NAG sing 239 n n C1 H1 NAG sing 240 n n C2 C3 NAG sing 241 n n C2 N2 NAG sing 242 n n C2 H2 NAG sing 243 n n C3 C4 NAG sing 244 n n C3 O3 NAG sing 245 n n C3 H3 NAG sing 246 n n C4 C5 NAG sing 247 n n C4 O4 NAG sing 248 n n C4 H4 NAG sing 249 n n C5 C6 NAG sing 250 n n C5 O5 NAG sing 251 n n C5 H5 NAG sing 252 n n C6 O6 NAG sing 253 n n C6 H61 NAG sing 254 n n C6 H62 NAG sing 255 n n C7 C8 NAG sing 256 n n C7 N2 NAG sing 257 n n C7 O7 NAG doub 258 n n C8 H81 NAG sing 259 n n C8 H82 NAG sing 260 n n C8 H83 NAG sing 261 n n N2 HN2 NAG sing 262 n n O1 HO1 NAG sing 263 n n O3 HO3 NAG sing 264 n n O4 HO4 NAG sing 265 n n O6 HO6 NAG sing 266 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 2HEV _atom_sites.fract_transf_matrix[1][1] 0.008936 _atom_sites.fract_transf_matrix[1][2] 0.005159 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010319 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004287 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAG F 1 200 200 NAG NAG . D 3 NAG R 1 200 200 NAG NAG . E 4 HOH F 1 201 1 HOH HOH . E 4 HOH F 2 202 2 HOH HOH . E 4 HOH F 3 203 3 HOH HOH . E 4 HOH F 4 204 4 HOH HOH . E 4 HOH F 5 205 5 HOH HOH . E 4 HOH F 6 206 6 HOH HOH . E 4 HOH F 7 207 7 HOH HOH . E 4 HOH F 8 208 9 HOH HOH . E 4 HOH F 9 209 12 HOH HOH . E 4 HOH F 10 210 13 HOH HOH . E 4 HOH F 11 211 16 HOH HOH . E 4 HOH F 12 212 17 HOH HOH . E 4 HOH F 13 213 20 HOH HOH . E 4 HOH F 14 214 21 HOH HOH . E 4 HOH F 15 215 22 HOH HOH . E 4 HOH F 16 216 26 HOH HOH . E 4 HOH F 17 217 27 HOH HOH . E 4 HOH F 18 218 28 HOH HOH . E 4 HOH F 19 219 29 HOH HOH . E 4 HOH F 20 220 30 HOH HOH . E 4 HOH F 21 221 31 HOH HOH . E 4 HOH F 22 222 32 HOH HOH . E 4 HOH F 23 223 33 HOH HOH . E 4 HOH F 24 224 34 HOH HOH . E 4 HOH F 25 225 37 HOH HOH . E 4 HOH F 26 226 39 HOH HOH . E 4 HOH F 27 227 40 HOH HOH . E 4 HOH F 28 228 41 HOH HOH . E 4 HOH F 29 229 42 HOH HOH . E 4 HOH F 30 230 43 HOH HOH . E 4 HOH F 31 231 47 HOH HOH . E 4 HOH F 32 232 48 HOH HOH . E 4 HOH F 33 233 49 HOH HOH . E 4 HOH F 34 234 50 HOH HOH . E 4 HOH F 35 235 51 HOH HOH . E 4 HOH F 36 236 53 HOH HOH . E 4 HOH F 37 237 56 HOH HOH . E 4 HOH F 38 238 59 HOH HOH . E 4 HOH F 39 239 61 HOH HOH . E 4 HOH F 40 240 62 HOH HOH . E 4 HOH F 41 241 68 HOH HOH . E 4 HOH F 42 242 72 HOH HOH . E 4 HOH F 43 243 73 HOH HOH . E 4 HOH F 44 244 74 HOH HOH . E 4 HOH F 45 245 76 HOH HOH . E 4 HOH F 46 246 77 HOH HOH . E 4 HOH F 47 247 78 HOH HOH . E 4 HOH F 48 248 89 HOH HOH . E 4 HOH F 49 249 90 HOH HOH . E 4 HOH F 50 250 91 HOH HOH . E 4 HOH F 51 251 92 HOH HOH . E 4 HOH F 52 252 93 HOH HOH . E 4 HOH F 53 253 94 HOH HOH . E 4 HOH F 54 254 95 HOH HOH . E 4 HOH F 55 255 96 HOH HOH . F 4 HOH R 1 201 8 HOH HOH . F 4 HOH R 2 202 10 HOH HOH . F 4 HOH R 3 203 11 HOH HOH . F 4 HOH R 4 204 14 HOH HOH . F 4 HOH R 5 205 15 HOH HOH . F 4 HOH R 6 206 18 HOH HOH . F 4 HOH R 7 207 19 HOH HOH . F 4 HOH R 8 208 23 HOH HOH . F 4 HOH R 9 209 25 HOH HOH . F 4 HOH R 10 210 35 HOH HOH . F 4 HOH R 11 211 38 HOH HOH . F 4 HOH R 12 212 44 HOH HOH . F 4 HOH R 13 213 45 HOH HOH . F 4 HOH R 14 214 46 HOH HOH . F 4 HOH R 15 215 52 HOH HOH . F 4 HOH R 16 216 54 HOH HOH . F 4 HOH R 17 217 55 HOH HOH . F 4 HOH R 18 218 58 HOH HOH . F 4 HOH R 19 219 65 HOH HOH . F 4 HOH R 20 220 67 HOH HOH . F 4 HOH R 21 221 70 HOH HOH . F 4 HOH R 22 222 71 HOH HOH . F 4 HOH R 23 223 79 HOH HOH . F 4 HOH R 24 224 80 HOH HOH . F 4 HOH R 25 225 81 HOH HOH . F 4 HOH R 26 226 82 HOH HOH . F 4 HOH R 27 227 83 HOH HOH . F 4 HOH R 28 228 84 HOH HOH . F 4 HOH R 29 229 85 HOH HOH . F 4 HOH R 30 230 86 HOH HOH . F 4 HOH R 31 231 87 HOH HOH . F 4 HOH R 32 232 88 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NAG . . . C 3 -4.868 42.259 80.901 1 61.02 ? C1 NAG 200 F 1 HETATM 2 C C2 NAG . . . C 3 -3.908 41.258 80.253 1 62.06 ? C2 NAG 200 F 1 HETATM 3 C C3 NAG . . . C 3 -3.357 40.322 81.33 1 64.43 ? C3 NAG 200 F 1 HETATM 4 C C4 NAG . . . C 3 -2.765 41.109 82.503 1 66.42 ? C4 NAG 200 F 1 HETATM 5 C C5 NAG . . . C 3 -3.676 42.255 82.966 1 65.41 ? C5 NAG 200 F 1 HETATM 6 C C6 NAG . . . C 3 -2.932 43.179 83.936 1 65.22 ? C6 NAG 200 F 1 HETATM 7 C C7 NAG . . . C 3 -4.235 40.539 77.902 1 63.68 ? C7 NAG 200 F 1 HETATM 8 C C8 NAG . . . C 3 -2.786 40.658 77.524 1 65.63 ? C8 NAG 200 F 1 HETATM 9 N N2 NAG . . . C 3 -4.564 40.49 79.199 1 61.7 ? N2 NAG 200 F 1 HETATM 10 O O3 NAG . . . C 3 -2.371 39.458 80.797 1 62.44 ? O3 NAG 200 F 1 HETATM 11 O O4 NAG . . . C 3 -2.493 40.232 83.582 1 67.74 ? O4 NAG 200 F 1 HETATM 12 O O5 NAG . . . C 3 -4.131 43.011 81.852 1 62.6 ? O5 NAG 200 F 1 HETATM 13 O O6 NAG . . . C 3 -3.776 43.621 84.979 1 64.02 ? O6 NAG 200 F 1 HETATM 14 O O7 NAG . . . C 3 -5.075 40.461 77.01 1 63.74 ? O7 NAG 200 F 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 738 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 14 #