data_2HF9 # _model_server_result.job_id i0XSripGcECHExCtXmBl1A _model_server_result.datetime_utc '2024-11-23 07:15:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2hf9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 2HF9 # _exptl.entry_id 2HF9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2HF9 _cell.length_a 43.463 _cell.length_b 68.107 _cell.length_c 155.84 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2HF9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J 1 1 A,C,D,E,I 2 1 B,F,G,H,J 2 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_455 x-1/2,-y+1/2,-z 1 0 0 0 -1 0 0 0 -1 -21.7315 34.0535 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 100 A CYS 95 1_555 A SG CYS 132 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 B SG CYS 100 B CYS 95 1_555 B SG CYS 132 B CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc1 A OG1 THR 52 A THR 47 1_555 C MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? metalc ? metalc2 A OD2 ASP 80 A ASP 75 1_555 C MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc3 A NE2 HIS 105 A HIS 100 1_555 D ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.859 ? metalc ? metalc4 A NE2 HIS 105 A HIS 100 4_555 G ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? metalc ? metalc5 A NE2 HIS 109 A HIS 104 1_555 D ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? metalc ? metalc6 A NE2 HIS 109 A HIS 104 4_555 G ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.835 ? metalc ? metalc7 A OE2 GLU 125 A GLU 120 1_555 C MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? metalc ? metalc8 E O3G GSP . A GSP 300 1_555 C MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.953 ? metalc ? metalc9 E O2B GSP . A GSP 300 1_555 C MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? metalc ? metalc10 C MG MG . A MG 301 1_555 I O HOH . A HOH 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc11 D ZN ZN . A ZN 302 1_555 B NE2 HIS 105 B HIS 100 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? metalc ? metalc12 D ZN ZN . A ZN 302 1_555 B NE2 HIS 109 B HIS 104 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc13 B OG1 THR 52 B THR 47 1_555 F MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? metalc ? metalc14 B OD2 ASP 80 B ASP 75 1_555 F MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? metalc ? metalc15 B NE2 HIS 105 B HIS 100 1_555 G ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? metalc ? metalc16 B NE2 HIS 109 B HIS 104 1_555 G ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? metalc ? metalc17 B OE2 GLU 125 B GLU 120 1_555 F MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc18 H O3G GSP . B GSP 300 1_555 F MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? metalc ? metalc19 H O2B GSP . B GSP 300 1_555 F MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc20 F MG MG . B MG 301 1_555 J O HOH . B HOH 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2HF9 _atom_sites.fract_transf_matrix[1][1] 0.023008 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014683 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006417 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 301 301 MG MG . D 3 ZN A 1 302 2 ZN ZN . E 4 GSP A 1 300 300 GSP GSP . F 2 MG B 1 301 301 MG MG . G 3 ZN B 1 302 1 ZN ZN . H 4 GSP B 1 300 300 GSP GSP . I 5 HOH A 1 303 9 HOH HOH . I 5 HOH A 2 304 12 HOH HOH . I 5 HOH A 3 305 13 HOH HOH . I 5 HOH A 4 306 14 HOH HOH . I 5 HOH A 5 307 16 HOH HOH . I 5 HOH A 6 308 21 HOH HOH . I 5 HOH A 7 309 22 HOH HOH . I 5 HOH A 8 310 23 HOH HOH . I 5 HOH A 9 311 24 HOH HOH . I 5 HOH A 10 312 27 HOH HOH . I 5 HOH A 11 313 28 HOH HOH . I 5 HOH A 12 314 29 HOH HOH . I 5 HOH A 13 315 31 HOH HOH . I 5 HOH A 14 316 35 HOH HOH . I 5 HOH A 15 317 36 HOH HOH . I 5 HOH A 16 318 37 HOH HOH . I 5 HOH A 17 319 38 HOH HOH . I 5 HOH A 18 320 42 HOH HOH . I 5 HOH A 19 321 43 HOH HOH . I 5 HOH A 20 322 48 HOH HOH . I 5 HOH A 21 323 49 HOH HOH . I 5 HOH A 22 324 50 HOH HOH . I 5 HOH A 23 325 52 HOH HOH . I 5 HOH A 24 326 53 HOH HOH . I 5 HOH A 25 327 55 HOH HOH . I 5 HOH A 26 328 56 HOH HOH . I 5 HOH A 27 329 58 HOH HOH . I 5 HOH A 28 330 60 HOH HOH . I 5 HOH A 29 331 64 HOH HOH . I 5 HOH A 30 332 69 HOH HOH . I 5 HOH A 31 333 70 HOH HOH . I 5 HOH A 32 334 71 HOH HOH . I 5 HOH A 33 335 72 HOH HOH . I 5 HOH A 34 336 74 HOH HOH . I 5 HOH A 35 337 75 HOH HOH . I 5 HOH A 36 338 78 HOH HOH . I 5 HOH A 37 339 79 HOH HOH . I 5 HOH A 38 340 80 HOH HOH . I 5 HOH A 39 341 81 HOH HOH . I 5 HOH A 40 342 83 HOH HOH . I 5 HOH A 41 343 92 HOH HOH . I 5 HOH A 42 344 96 HOH HOH . I 5 HOH A 43 345 97 HOH HOH . I 5 HOH A 44 346 102 HOH HOH . I 5 HOH A 45 347 105 HOH HOH . I 5 HOH A 46 348 110 HOH HOH . I 5 HOH A 47 349 111 HOH HOH . I 5 HOH A 48 350 119 HOH HOH . I 5 HOH A 49 351 121 HOH HOH . I 5 HOH A 50 352 122 HOH HOH . I 5 HOH A 51 353 123 HOH HOH . I 5 HOH A 52 354 124 HOH HOH . I 5 HOH A 53 355 126 HOH HOH . I 5 HOH A 54 356 129 HOH HOH . I 5 HOH A 55 357 130 HOH HOH . I 5 HOH A 56 358 134 HOH HOH . I 5 HOH A 57 359 135 HOH HOH . I 5 HOH A 58 360 136 HOH HOH . I 5 HOH A 59 361 137 HOH HOH . I 5 HOH A 60 362 139 HOH HOH . I 5 HOH A 61 363 142 HOH HOH . I 5 HOH A 62 364 144 HOH HOH . I 5 HOH A 63 365 146 HOH HOH . I 5 HOH A 64 366 148 HOH HOH . I 5 HOH A 65 367 149 HOH HOH . I 5 HOH A 66 368 150 HOH HOH . I 5 HOH A 67 369 152 HOH HOH . I 5 HOH A 68 370 155 HOH HOH . I 5 HOH A 69 371 157 HOH HOH . I 5 HOH A 70 372 159 HOH HOH . I 5 HOH A 71 373 161 HOH HOH . I 5 HOH A 72 374 165 HOH HOH . I 5 HOH A 73 375 169 HOH HOH . I 5 HOH A 74 376 171 HOH HOH . I 5 HOH A 75 377 173 HOH HOH . I 5 HOH A 76 378 175 HOH HOH . I 5 HOH A 77 379 177 HOH HOH . I 5 HOH A 78 380 178 HOH HOH . I 5 HOH A 79 381 179 HOH HOH . I 5 HOH A 80 382 180 HOH HOH . I 5 HOH A 81 383 183 HOH HOH . I 5 HOH A 82 384 186 HOH HOH . I 5 HOH A 83 385 193 HOH HOH . I 5 HOH A 84 386 204 HOH HOH . I 5 HOH A 85 387 212 HOH HOH . I 5 HOH A 86 388 213 HOH HOH . I 5 HOH A 87 389 214 HOH HOH . I 5 HOH A 88 390 215 HOH HOH . J 5 HOH B 1 303 3 HOH HOH . J 5 HOH B 2 304 4 HOH HOH . J 5 HOH B 3 305 5 HOH HOH . J 5 HOH B 4 306 6 HOH HOH . J 5 HOH B 5 307 7 HOH HOH . J 5 HOH B 6 308 8 HOH HOH . J 5 HOH B 7 309 15 HOH HOH . J 5 HOH B 8 310 17 HOH HOH . J 5 HOH B 9 311 18 HOH HOH . J 5 HOH B 10 312 19 HOH HOH . J 5 HOH B 11 313 20 HOH HOH . J 5 HOH B 12 314 25 HOH HOH . J 5 HOH B 13 315 26 HOH HOH . J 5 HOH B 14 316 30 HOH HOH . J 5 HOH B 15 317 32 HOH HOH . J 5 HOH B 16 318 33 HOH HOH . J 5 HOH B 17 319 34 HOH HOH . J 5 HOH B 18 320 39 HOH HOH . J 5 HOH B 19 321 40 HOH HOH . J 5 HOH B 20 322 41 HOH HOH . J 5 HOH B 21 323 44 HOH HOH . J 5 HOH B 22 324 45 HOH HOH . J 5 HOH B 23 325 46 HOH HOH . J 5 HOH B 24 326 47 HOH HOH . J 5 HOH B 25 327 51 HOH HOH . J 5 HOH B 26 328 54 HOH HOH . J 5 HOH B 27 329 57 HOH HOH . J 5 HOH B 28 330 59 HOH HOH . J 5 HOH B 29 331 61 HOH HOH . J 5 HOH B 30 332 62 HOH HOH . J 5 HOH B 31 333 63 HOH HOH . J 5 HOH B 32 334 65 HOH HOH . J 5 HOH B 33 335 67 HOH HOH . J 5 HOH B 34 336 68 HOH HOH . J 5 HOH B 35 337 73 HOH HOH . J 5 HOH B 36 338 76 HOH HOH . J 5 HOH B 37 339 77 HOH HOH . J 5 HOH B 38 340 82 HOH HOH . J 5 HOH B 39 341 84 HOH HOH . J 5 HOH B 40 342 85 HOH HOH . J 5 HOH B 41 343 86 HOH HOH . J 5 HOH B 42 344 87 HOH HOH . J 5 HOH B 43 345 89 HOH HOH . J 5 HOH B 44 346 90 HOH HOH . J 5 HOH B 45 347 91 HOH HOH . J 5 HOH B 46 348 93 HOH HOH . J 5 HOH B 47 349 94 HOH HOH . J 5 HOH B 48 350 98 HOH HOH . J 5 HOH B 49 351 99 HOH HOH . J 5 HOH B 50 352 100 HOH HOH . J 5 HOH B 51 353 103 HOH HOH . J 5 HOH B 52 354 106 HOH HOH . J 5 HOH B 53 355 108 HOH HOH . J 5 HOH B 54 356 109 HOH HOH . J 5 HOH B 55 357 112 HOH HOH . J 5 HOH B 56 358 113 HOH HOH . J 5 HOH B 57 359 115 HOH HOH . J 5 HOH B 58 360 120 HOH HOH . J 5 HOH B 59 361 125 HOH HOH . J 5 HOH B 60 362 127 HOH HOH . J 5 HOH B 61 363 128 HOH HOH . J 5 HOH B 62 364 131 HOH HOH . J 5 HOH B 63 365 138 HOH HOH . J 5 HOH B 64 366 140 HOH HOH . J 5 HOH B 65 367 143 HOH HOH . J 5 HOH B 66 368 145 HOH HOH . J 5 HOH B 67 369 147 HOH HOH . J 5 HOH B 68 370 156 HOH HOH . J 5 HOH B 69 371 158 HOH HOH . J 5 HOH B 70 372 160 HOH HOH . J 5 HOH B 71 373 162 HOH HOH . J 5 HOH B 72 374 163 HOH HOH . J 5 HOH B 73 375 164 HOH HOH . J 5 HOH B 74 376 166 HOH HOH . J 5 HOH B 75 377 168 HOH HOH . J 5 HOH B 76 378 170 HOH HOH . J 5 HOH B 77 379 174 HOH HOH . J 5 HOH B 78 380 176 HOH HOH . J 5 HOH B 79 381 181 HOH HOH . J 5 HOH B 80 382 182 HOH HOH . J 5 HOH B 81 383 187 HOH HOH . J 5 HOH B 82 384 188 HOH HOH . J 5 HOH B 83 385 195 HOH HOH . J 5 HOH B 84 386 199 HOH HOH . J 5 HOH B 85 387 210 HOH HOH . J 5 HOH B 86 388 211 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -15.288 _atom_site.Cartn_y 3.549 _atom_site.Cartn_z -4.023 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 14.15 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 38 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #