data_2HKU
#
_model_server_result.job_id            -12RWKjAf33QvukBBTx-yw 
_model_server_result.datetime_utc      '2024-12-29 00:39:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2hku 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":301}' 
#
_entry.id    2HKU 
#
_exptl.entry_id    2HKU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2HKU 
_cell.length_a            94.4 
_cell.length_b            123.701 
_cell.length_c            73.84 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2HKU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ALA 117 A ALA 115 1_555 A N MSE 118 A MSE 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? 
covale ? covale2 A C MSE 118 A MSE 116 1_555 A N LEU 119 A LEU 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? 
covale ? covale3 A C LEU 119 A LEU 117 1_555 A N MSE 120 A MSE 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale4 A C MSE 120 A MSE 118 1_555 A N THR 121 A THR 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale5 A C LEU 150 A LEU 148 1_555 A N MSE 151 A MSE 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale6 A C MSE 151 A MSE 149 1_555 A N ARG 152 A ARG 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale7 B C ALA 117 B ALA 115 1_555 B N MSE 118 B MSE 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale8 B C MSE 118 B MSE 116 1_555 B N LEU 119 B LEU 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale9 B C LEU 119 B LEU 117 1_555 B N MSE 120 B MSE 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.304 ? 
covale ? covale10 B C MSE 120 B MSE 118 1_555 B N THR 121 B THR 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale11 B C LEU 150 B LEU 148 1_555 B N MSE 151 B MSE 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale12 B C MSE 151 B MSE 149 1_555 B N ARG 152 B ARG 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     2HKU 
_atom_sites.fract_transf_matrix[1][1]    0.010593 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008084 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013543 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 EDO A 1 301 301 EDO EDO . 
D 2 EDO A 1 302 302 EDO EDO . 
E 2 EDO A 1 303 303 EDO EDO . 
F 2 EDO A 1 304 304 EDO EDO . 
G 2 EDO A 1 305 305 EDO EDO . 
H 2 EDO A 1 306 306 EDO EDO . 
I 3 PG4 B 1 214 201 PG4 PG4 . 
J 2 EDO B 1 307 307 EDO EDO . 
K 4 HOH A 1 307 1 HOH HOH . 
K 4 HOH A 2 308 3 HOH HOH . 
K 4 HOH A 3 309 5 HOH HOH . 
K 4 HOH A 4 310 7 HOH HOH . 
K 4 HOH A 5 311 8 HOH HOH . 
K 4 HOH A 6 312 9 HOH HOH . 
K 4 HOH A 7 313 11 HOH HOH . 
K 4 HOH A 8 314 14 HOH HOH . 
K 4 HOH A 9 315 15 HOH HOH . 
K 4 HOH A 10 316 18 HOH HOH . 
K 4 HOH A 11 317 19 HOH HOH . 
K 4 HOH A 12 318 21 HOH HOH . 
K 4 HOH A 13 319 22 HOH HOH . 
K 4 HOH A 14 320 24 HOH HOH . 
K 4 HOH A 15 321 26 HOH HOH . 
K 4 HOH A 16 322 27 HOH HOH . 
K 4 HOH A 17 323 32 HOH HOH . 
K 4 HOH A 18 324 35 HOH HOH . 
K 4 HOH A 19 325 36 HOH HOH . 
K 4 HOH A 20 326 37 HOH HOH . 
K 4 HOH A 21 327 39 HOH HOH . 
K 4 HOH A 22 328 44 HOH HOH . 
K 4 HOH A 23 329 45 HOH HOH . 
K 4 HOH A 24 330 49 HOH HOH . 
K 4 HOH A 25 331 50 HOH HOH . 
K 4 HOH A 26 332 52 HOH HOH . 
K 4 HOH A 27 333 53 HOH HOH . 
K 4 HOH A 28 334 55 HOH HOH . 
K 4 HOH A 29 335 58 HOH HOH . 
K 4 HOH A 30 336 59 HOH HOH . 
K 4 HOH A 31 337 60 HOH HOH . 
K 4 HOH A 32 338 61 HOH HOH . 
K 4 HOH A 33 339 63 HOH HOH . 
K 4 HOH A 34 340 66 HOH HOH . 
K 4 HOH A 35 341 68 HOH HOH . 
K 4 HOH A 36 342 69 HOH HOH . 
K 4 HOH A 37 343 70 HOH HOH . 
K 4 HOH A 38 344 71 HOH HOH . 
K 4 HOH A 39 345 72 HOH HOH . 
K 4 HOH A 40 346 73 HOH HOH . 
K 4 HOH A 41 347 84 HOH HOH . 
K 4 HOH A 42 348 86 HOH HOH . 
K 4 HOH A 43 349 88 HOH HOH . 
K 4 HOH A 44 350 89 HOH HOH . 
K 4 HOH A 45 351 90 HOH HOH . 
K 4 HOH A 46 352 92 HOH HOH . 
K 4 HOH A 47 353 93 HOH HOH . 
K 4 HOH A 48 354 94 HOH HOH . 
K 4 HOH A 49 355 95 HOH HOH . 
K 4 HOH A 50 356 96 HOH HOH . 
K 4 HOH A 51 357 100 HOH HOH . 
K 4 HOH A 52 358 101 HOH HOH . 
K 4 HOH A 53 359 102 HOH HOH . 
K 4 HOH A 54 360 103 HOH HOH . 
K 4 HOH A 55 361 109 HOH HOH . 
K 4 HOH A 56 362 110 HOH HOH . 
K 4 HOH A 57 363 111 HOH HOH . 
K 4 HOH A 58 364 112 HOH HOH . 
K 4 HOH A 59 365 113 HOH HOH . 
K 4 HOH A 60 366 118 HOH HOH . 
K 4 HOH A 61 367 119 HOH HOH . 
K 4 HOH A 62 368 120 HOH HOH . 
K 4 HOH A 63 369 121 HOH HOH . 
K 4 HOH A 64 370 125 HOH HOH . 
K 4 HOH A 65 371 127 HOH HOH . 
K 4 HOH A 66 372 129 HOH HOH . 
K 4 HOH A 67 373 130 HOH HOH . 
K 4 HOH A 68 374 133 HOH HOH . 
K 4 HOH A 69 375 135 HOH HOH . 
K 4 HOH A 70 376 140 HOH HOH . 
K 4 HOH A 71 377 141 HOH HOH . 
K 4 HOH A 72 378 143 HOH HOH . 
K 4 HOH A 73 379 144 HOH HOH . 
K 4 HOH A 74 380 145 HOH HOH . 
K 4 HOH A 75 381 146 HOH HOH . 
K 4 HOH A 76 382 147 HOH HOH . 
L 4 HOH B 1 308 2 HOH HOH . 
L 4 HOH B 2 309 4 HOH HOH . 
L 4 HOH B 3 310 6 HOH HOH . 
L 4 HOH B 4 311 10 HOH HOH . 
L 4 HOH B 5 312 12 HOH HOH . 
L 4 HOH B 6 313 13 HOH HOH . 
L 4 HOH B 7 314 16 HOH HOH . 
L 4 HOH B 8 315 17 HOH HOH . 
L 4 HOH B 9 316 20 HOH HOH . 
L 4 HOH B 10 317 23 HOH HOH . 
L 4 HOH B 11 318 25 HOH HOH . 
L 4 HOH B 12 319 28 HOH HOH . 
L 4 HOH B 13 320 29 HOH HOH . 
L 4 HOH B 14 321 30 HOH HOH . 
L 4 HOH B 15 322 31 HOH HOH . 
L 4 HOH B 16 323 33 HOH HOH . 
L 4 HOH B 17 324 34 HOH HOH . 
L 4 HOH B 18 325 38 HOH HOH . 
L 4 HOH B 19 326 40 HOH HOH . 
L 4 HOH B 20 327 41 HOH HOH . 
L 4 HOH B 21 328 42 HOH HOH . 
L 4 HOH B 22 329 43 HOH HOH . 
L 4 HOH B 23 330 46 HOH HOH . 
L 4 HOH B 24 331 47 HOH HOH . 
L 4 HOH B 25 332 48 HOH HOH . 
L 4 HOH B 26 333 51 HOH HOH . 
L 4 HOH B 27 334 54 HOH HOH . 
L 4 HOH B 28 335 56 HOH HOH . 
L 4 HOH B 29 336 57 HOH HOH . 
L 4 HOH B 30 337 62 HOH HOH . 
L 4 HOH B 31 338 64 HOH HOH . 
L 4 HOH B 32 339 65 HOH HOH . 
L 4 HOH B 33 340 67 HOH HOH . 
L 4 HOH B 34 341 74 HOH HOH . 
L 4 HOH B 35 342 75 HOH HOH . 
L 4 HOH B 36 343 77 HOH HOH . 
L 4 HOH B 37 344 78 HOH HOH . 
L 4 HOH B 38 345 79 HOH HOH . 
L 4 HOH B 39 346 80 HOH HOH . 
L 4 HOH B 40 347 81 HOH HOH . 
L 4 HOH B 41 348 82 HOH HOH . 
L 4 HOH B 42 349 83 HOH HOH . 
L 4 HOH B 43 350 85 HOH HOH . 
L 4 HOH B 44 351 87 HOH HOH . 
L 4 HOH B 45 352 91 HOH HOH . 
L 4 HOH B 46 353 97 HOH HOH . 
L 4 HOH B 47 354 99 HOH HOH . 
L 4 HOH B 48 355 104 HOH HOH . 
L 4 HOH B 49 356 105 HOH HOH . 
L 4 HOH B 50 357 106 HOH HOH . 
L 4 HOH B 51 358 107 HOH HOH . 
L 4 HOH B 52 359 108 HOH HOH . 
L 4 HOH B 53 360 114 HOH HOH . 
L 4 HOH B 54 361 115 HOH HOH . 
L 4 HOH B 55 362 117 HOH HOH . 
L 4 HOH B 56 363 122 HOH HOH . 
L 4 HOH B 57 364 123 HOH HOH . 
L 4 HOH B 58 365 124 HOH HOH . 
L 4 HOH B 59 366 126 HOH HOH . 
L 4 HOH B 60 367 128 HOH HOH . 
L 4 HOH B 61 368 131 HOH HOH . 
L 4 HOH B 62 369 132 HOH HOH . 
L 4 HOH B 63 370 134 HOH HOH . 
L 4 HOH B 64 371 136 HOH HOH . 
L 4 HOH B 65 372 137 HOH HOH . 
L 4 HOH B 66 373 138 HOH HOH . 
L 4 HOH B 67 374 139 HOH HOH . 
L 4 HOH B 68 375 142 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . C 2 22.383 26.52 54.031 1 46.97 ? C1 EDO 301 A 1 
HETATM 2 O O1 EDO . . . C 2 22.822 25.691 55.125 1 47.73 ? O1 EDO 301 A 1 
HETATM 3 C C2 EDO . . . C 2 21.956 25.579 52.897 1 44.54 ? C2 EDO 301 A 1 
HETATM 4 O O2 EDO . . . C 2 22.24 24.207 53.206 1 35.55 ? O2 EDO 301 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           244 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           4 
#