data_2HLP # _model_server_result.job_id C1qtvkMgmbIjIAgXEmHV1g _model_server_result.datetime_utc '2025-03-06 00:16:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2hlp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":2001}' # _entry.id 2HLP # _exptl.entry_id 2HLP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2HLP _cell.length_a 114.16 _cell.length_b 129.98 _cell.length_c 123.45 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2HLP _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_555 -x,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 0 0 61.725 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 222 A GLU 247 1_555 D NA NA . A NA 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.767 ? metalc ? metalc2 D NA NA . A NA 2001 1_555 B OE2 GLU 222 B GLU 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.846 ? metalc ? metalc3 D NA NA . A NA 2001 1_555 G O HOH . B HOH 1025 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.992 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2HLP _atom_sites.fract_transf_matrix[1][1] 0.00876 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007693 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0081 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL A 1 1002 1002 CL CL . D 3 NA A 1 2001 2001 NA NA . E 2 CL B 1 1001 1001 CL CL . F 4 HOH A 1 2002 1 HOH HOH . F 4 HOH A 2 2003 2 HOH HOH . F 4 HOH A 3 2004 3 HOH HOH . F 4 HOH A 4 2005 4 HOH HOH . F 4 HOH A 5 2006 6 HOH HOH . F 4 HOH A 6 2007 7 HOH HOH . F 4 HOH A 7 2008 11 HOH HOH . F 4 HOH A 8 2009 12 HOH HOH . F 4 HOH A 9 2010 14 HOH HOH . F 4 HOH A 10 2011 16 HOH HOH . F 4 HOH A 11 2012 18 HOH HOH . F 4 HOH A 12 2013 19 HOH HOH . F 4 HOH A 13 2014 22 HOH HOH . F 4 HOH A 14 2015 25 HOH HOH . F 4 HOH A 15 2016 30 HOH HOH . F 4 HOH A 16 2017 31 HOH HOH . F 4 HOH A 17 2018 33 HOH HOH . F 4 HOH A 18 2019 35 HOH HOH . F 4 HOH A 19 2020 38 HOH HOH . F 4 HOH A 20 2021 44 HOH HOH . F 4 HOH A 21 2022 45 HOH HOH . F 4 HOH A 22 2023 49 HOH HOH . F 4 HOH A 23 2024 50 HOH HOH . F 4 HOH A 24 2025 51 HOH HOH . F 4 HOH A 25 2026 52 HOH HOH . F 4 HOH A 26 2027 53 HOH HOH . F 4 HOH A 27 2028 54 HOH HOH . F 4 HOH A 28 2029 55 HOH HOH . F 4 HOH A 29 2030 56 HOH HOH . F 4 HOH A 30 2031 57 HOH HOH . F 4 HOH A 31 2032 60 HOH HOH . F 4 HOH A 32 2033 62 HOH HOH . F 4 HOH A 33 2034 63 HOH HOH . F 4 HOH A 34 2035 64 HOH HOH . F 4 HOH A 35 2036 65 HOH HOH . F 4 HOH A 36 2037 66 HOH HOH . F 4 HOH A 37 2038 67 HOH HOH . F 4 HOH A 38 2039 69 HOH HOH . F 4 HOH A 39 2040 73 HOH HOH . F 4 HOH A 40 2041 74 HOH HOH . F 4 HOH A 41 2042 75 HOH HOH . F 4 HOH A 42 2043 82 HOH HOH . F 4 HOH A 43 2044 83 HOH HOH . F 4 HOH A 44 2045 85 HOH HOH . F 4 HOH A 45 2046 86 HOH HOH . F 4 HOH A 46 2047 91 HOH HOH . F 4 HOH A 47 2048 94 HOH HOH . F 4 HOH A 48 2049 95 HOH HOH . F 4 HOH A 49 2050 98 HOH HOH . F 4 HOH A 50 2051 99 HOH HOH . F 4 HOH A 51 2052 101 HOH HOH . F 4 HOH A 52 2053 102 HOH HOH . F 4 HOH A 53 2054 104 HOH HOH . F 4 HOH A 54 2055 109 HOH HOH . F 4 HOH A 55 2056 110 HOH HOH . F 4 HOH A 56 2057 111 HOH HOH . F 4 HOH A 57 2058 112 HOH HOH . F 4 HOH A 58 2059 113 HOH HOH . F 4 HOH A 59 2060 114 HOH HOH . F 4 HOH A 60 2061 115 HOH HOH . F 4 HOH A 61 2062 117 HOH HOH . F 4 HOH A 62 2063 119 HOH HOH . F 4 HOH A 63 2064 120 HOH HOH . F 4 HOH A 64 2065 122 HOH HOH . F 4 HOH A 65 2066 124 HOH HOH . F 4 HOH A 66 2067 127 HOH HOH . F 4 HOH A 67 2068 128 HOH HOH . F 4 HOH A 68 2069 129 HOH HOH . F 4 HOH A 69 2070 130 HOH HOH . F 4 HOH A 70 2071 131 HOH HOH . F 4 HOH A 71 2072 135 HOH HOH . F 4 HOH A 72 2073 136 HOH HOH . F 4 HOH A 73 2074 139 HOH HOH . F 4 HOH A 74 2075 143 HOH HOH . F 4 HOH A 75 2076 146 HOH HOH . F 4 HOH A 76 2077 148 HOH HOH . F 4 HOH A 77 2078 149 HOH HOH . F 4 HOH A 78 2079 151 HOH HOH . F 4 HOH A 79 2080 153 HOH HOH . F 4 HOH A 80 2081 156 HOH HOH . F 4 HOH A 81 2082 159 HOH HOH . F 4 HOH A 82 2083 161 HOH HOH . F 4 HOH A 83 2084 165 HOH HOH . F 4 HOH A 84 2085 168 HOH HOH . F 4 HOH A 85 2086 170 HOH HOH . F 4 HOH A 86 2087 174 HOH HOH . F 4 HOH A 87 2088 176 HOH HOH . F 4 HOH A 88 2089 181 HOH HOH . F 4 HOH A 89 2090 182 HOH HOH . F 4 HOH A 90 2091 183 HOH HOH . F 4 HOH A 91 2092 184 HOH HOH . F 4 HOH A 92 2093 186 HOH HOH . F 4 HOH A 93 2094 187 HOH HOH . F 4 HOH A 94 2095 189 HOH HOH . F 4 HOH A 95 2096 190 HOH HOH . F 4 HOH A 96 2097 191 HOH HOH . F 4 HOH A 97 2098 194 HOH HOH . F 4 HOH A 98 2099 197 HOH HOH . F 4 HOH A 99 2100 198 HOH HOH . F 4 HOH A 100 2101 200 HOH HOH . F 4 HOH A 101 2102 202 HOH HOH . F 4 HOH A 102 2103 203 HOH HOH . F 4 HOH A 103 2104 206 HOH HOH . F 4 HOH A 104 2105 207 HOH HOH . F 4 HOH A 105 2106 209 HOH HOH . F 4 HOH A 106 2107 212 HOH HOH . F 4 HOH A 107 2108 215 HOH HOH . F 4 HOH A 108 2109 216 HOH HOH . F 4 HOH A 109 2110 219 HOH HOH . F 4 HOH A 110 2111 221 HOH HOH . F 4 HOH A 111 2112 222 HOH HOH . F 4 HOH A 112 2113 223 HOH HOH . F 4 HOH A 113 2114 225 HOH HOH . F 4 HOH A 114 2115 226 HOH HOH . F 4 HOH A 115 2116 228 HOH HOH . F 4 HOH A 116 2117 229 HOH HOH . F 4 HOH A 117 2118 231 HOH HOH . F 4 HOH A 118 2119 232 HOH HOH . F 4 HOH A 119 2120 236 HOH HOH . F 4 HOH A 120 2121 239 HOH HOH . F 4 HOH A 121 2122 242 HOH HOH . G 4 HOH B 1 1002 5 HOH HOH . G 4 HOH B 2 1003 8 HOH HOH . G 4 HOH B 3 1004 9 HOH HOH . G 4 HOH B 4 1005 10 HOH HOH . G 4 HOH B 5 1006 13 HOH HOH . G 4 HOH B 6 1007 15 HOH HOH . G 4 HOH B 7 1008 17 HOH HOH . G 4 HOH B 8 1009 20 HOH HOH . G 4 HOH B 9 1010 21 HOH HOH . G 4 HOH B 10 1011 23 HOH HOH . G 4 HOH B 11 1012 24 HOH HOH . G 4 HOH B 12 1013 26 HOH HOH . G 4 HOH B 13 1014 27 HOH HOH . G 4 HOH B 14 1015 28 HOH HOH . G 4 HOH B 15 1016 29 HOH HOH . G 4 HOH B 16 1017 32 HOH HOH . G 4 HOH B 17 1018 34 HOH HOH . G 4 HOH B 18 1019 36 HOH HOH . G 4 HOH B 19 1020 37 HOH HOH . G 4 HOH B 20 1021 39 HOH HOH . G 4 HOH B 21 1022 40 HOH HOH . G 4 HOH B 22 1023 41 HOH HOH . G 4 HOH B 23 1024 42 HOH HOH . G 4 HOH B 24 1025 43 HOH HOH . G 4 HOH B 25 1026 46 HOH HOH . G 4 HOH B 26 1027 47 HOH HOH . G 4 HOH B 27 1028 48 HOH HOH . G 4 HOH B 28 1029 58 HOH HOH . G 4 HOH B 29 1030 59 HOH HOH . G 4 HOH B 30 1031 61 HOH HOH . G 4 HOH B 31 1032 68 HOH HOH . G 4 HOH B 32 1033 70 HOH HOH . G 4 HOH B 33 1034 71 HOH HOH . G 4 HOH B 34 1035 72 HOH HOH . G 4 HOH B 35 1036 76 HOH HOH . G 4 HOH B 36 1037 77 HOH HOH . G 4 HOH B 37 1038 78 HOH HOH . G 4 HOH B 38 1039 79 HOH HOH . G 4 HOH B 39 1040 80 HOH HOH . G 4 HOH B 40 1041 81 HOH HOH . G 4 HOH B 41 1042 84 HOH HOH . G 4 HOH B 42 1043 87 HOH HOH . G 4 HOH B 43 1044 88 HOH HOH . G 4 HOH B 44 1045 89 HOH HOH . G 4 HOH B 45 1046 90 HOH HOH . G 4 HOH B 46 1047 92 HOH HOH . G 4 HOH B 47 1048 93 HOH HOH . G 4 HOH B 48 1049 96 HOH HOH . G 4 HOH B 49 1050 97 HOH HOH . G 4 HOH B 50 1051 100 HOH HOH . G 4 HOH B 51 1052 103 HOH HOH . G 4 HOH B 52 1053 105 HOH HOH . G 4 HOH B 53 1054 106 HOH HOH . G 4 HOH B 54 1055 107 HOH HOH . G 4 HOH B 55 1056 108 HOH HOH . G 4 HOH B 56 1057 116 HOH HOH . G 4 HOH B 57 1058 118 HOH HOH . G 4 HOH B 58 1059 121 HOH HOH . G 4 HOH B 59 1060 123 HOH HOH . G 4 HOH B 60 1061 125 HOH HOH . G 4 HOH B 61 1062 126 HOH HOH . G 4 HOH B 62 1063 132 HOH HOH . G 4 HOH B 63 1064 133 HOH HOH . G 4 HOH B 64 1065 134 HOH HOH . G 4 HOH B 65 1066 137 HOH HOH . G 4 HOH B 66 1067 138 HOH HOH . G 4 HOH B 67 1068 140 HOH HOH . G 4 HOH B 68 1069 141 HOH HOH . G 4 HOH B 69 1070 142 HOH HOH . G 4 HOH B 70 1071 144 HOH HOH . G 4 HOH B 71 1072 145 HOH HOH . G 4 HOH B 72 1073 147 HOH HOH . G 4 HOH B 73 1074 150 HOH HOH . G 4 HOH B 74 1075 152 HOH HOH . G 4 HOH B 75 1076 154 HOH HOH . G 4 HOH B 76 1077 155 HOH HOH . G 4 HOH B 77 1078 157 HOH HOH . G 4 HOH B 78 1079 158 HOH HOH . G 4 HOH B 79 1080 160 HOH HOH . G 4 HOH B 80 1081 162 HOH HOH . G 4 HOH B 81 1082 163 HOH HOH . G 4 HOH B 82 1083 164 HOH HOH . G 4 HOH B 83 1084 166 HOH HOH . G 4 HOH B 84 1085 167 HOH HOH . G 4 HOH B 85 1086 169 HOH HOH . G 4 HOH B 86 1087 171 HOH HOH . G 4 HOH B 87 1088 172 HOH HOH . G 4 HOH B 88 1089 173 HOH HOH . G 4 HOH B 89 1090 175 HOH HOH . G 4 HOH B 90 1091 177 HOH HOH . G 4 HOH B 91 1092 178 HOH HOH . G 4 HOH B 92 1093 179 HOH HOH . G 4 HOH B 93 1094 180 HOH HOH . G 4 HOH B 94 1095 185 HOH HOH . G 4 HOH B 95 1096 188 HOH HOH . G 4 HOH B 96 1097 192 HOH HOH . G 4 HOH B 97 1098 193 HOH HOH . G 4 HOH B 98 1099 195 HOH HOH . G 4 HOH B 99 1100 196 HOH HOH . G 4 HOH B 100 1101 199 HOH HOH . G 4 HOH B 101 1102 201 HOH HOH . G 4 HOH B 102 1103 204 HOH HOH . G 4 HOH B 103 1104 205 HOH HOH . G 4 HOH B 104 1105 208 HOH HOH . G 4 HOH B 105 1106 210 HOH HOH . G 4 HOH B 106 1107 211 HOH HOH . G 4 HOH B 107 1108 213 HOH HOH . G 4 HOH B 108 1109 214 HOH HOH . G 4 HOH B 109 1110 217 HOH HOH . G 4 HOH B 110 1111 218 HOH HOH . G 4 HOH B 111 1112 220 HOH HOH . G 4 HOH B 112 1113 224 HOH HOH . G 4 HOH B 113 1114 227 HOH HOH . G 4 HOH B 114 1115 230 HOH HOH . G 4 HOH B 115 1116 233 HOH HOH . G 4 HOH B 116 1117 234 HOH HOH . G 4 HOH B 117 1118 235 HOH HOH . G 4 HOH B 118 1119 237 HOH HOH . G 4 HOH B 119 1120 238 HOH HOH . G 4 HOH B 120 1121 240 HOH HOH . G 4 HOH B 121 1122 241 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 24.943 _atom_site.Cartn_y 35.338 _atom_site.Cartn_z 36.54 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 56.74 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 2001 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #