data_2HO4 # _model_server_result.job_id H16pfWSMVRBTGl1ZmCAetQ _model_server_result.datetime_utc '2024-11-28 03:14:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ho4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":403}' # _entry.id 2HO4 # _exptl.entry_id 2HO4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2HO4 _cell.length_a 46.586 _cell.length_b 68.078 _cell.length_c 190.982 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2HO4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,K 1 1 B,G,H,I,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 H N N ? 3 I N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C VAL 40 A VAL 40 1_555 A N MSE 41 A MSE 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale2 A C MSE 41 A MSE 41 1_555 A N VAL 42 A VAL 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale3 A C PRO 90 A PRO 90 1_555 A N MSE 91 A MSE 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.311 ? covale ? covale4 A C MSE 91 A MSE 91 1_555 A N LEU 92 A LEU 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale5 A C ALA 174 A ALA 174 1_555 A N MSE 175 A MSE 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale6 A C MSE 175 A MSE 175 1_555 A N VAL 176 A VAL 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale7 A C VAL 200 A VAL 200 1_555 A N MSE 201 A MSE 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale8 A C MSE 201 A MSE 201 1_555 A N ILE 202 A ILE 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale9 A C GLY 217 A GLY 217 1_555 A N MSE 218 A MSE 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? covale ? covale10 A C MSE 218 A MSE 218 1_555 A N LEU 219 A LEU 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? covale ? covale11 B C VAL 40 B VAL 40 1_555 B N MSE 41 B MSE 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale12 B C MSE 41 B MSE 41 1_555 B N VAL 42 B VAL 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale13 B C PRO 90 B PRO 90 1_555 B N MSE 91 B MSE 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale14 B C MSE 91 B MSE 91 1_555 B N LEU 92 B LEU 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale15 B C ALA 174 B ALA 174 1_555 B N MSE 175 B MSE 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale16 B C MSE 175 B MSE 175 1_555 B N VAL 176 B VAL 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale17 B C VAL 200 B VAL 200 1_555 B N MSE 201 B MSE 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale18 B C MSE 201 B MSE 201 1_555 B N ILE 202 B ILE 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? covale ? covale19 B C GLY 217 B GLY 217 1_555 B N MSE 218 B MSE 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale20 B C MSE 218 B MSE 218 1_555 B N LEU 219 B LEU 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? metalc ? metalc1 A OD2 ASP 13 A ASP 13 1_555 C MG MG . A MG 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc2 A OD1 ASP 13 A ASP 13 1_555 C MG MG . A MG 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.949 ? metalc ? metalc3 A O ASN 15 A ASN 15 1_555 C MG MG . A MG 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.912 ? metalc ? metalc4 C MG MG . A MG 260 1_555 K O HOH . A HOH 446 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? metalc ? metalc5 B OD2 ASP 13 B ASP 13 1_555 G MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? metalc ? metalc6 B O ASN 15 B ASN 15 1_555 G MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc7 B OD1 ASP 204 B ASP 204 1_555 G MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? metalc ? metalc8 G MG MG . B MG 301 1_555 L O HOH . B HOH 459 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc9 G MG MG . B MG 301 1_555 L O HOH . B HOH 461 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.885 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 279 n n P O2 PO4 sing 280 n n P O3 PO4 sing 281 n n P O4 PO4 sing 282 n n # _atom_sites.entry_id 2HO4 _atom_sites.fract_transf_matrix[1][1] 0.021466 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014689 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005236 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 260 201 MG MG . D 3 PO4 A 1 402 402 PO4 PO4 . E 3 PO4 A 1 404 404 PO4 PO4 . F 3 PO4 A 1 406 406 PO4 PO4 . G 2 MG B 1 301 301 MG MG . H 3 PO4 B 1 401 401 PO4 PO4 . I 3 PO4 B 1 403 403 PO4 PO4 . J 3 PO4 B 1 405 405 PO4 PO4 . K 4 HOH A 1 407 2 HOH HOH . K 4 HOH A 2 408 3 HOH HOH . K 4 HOH A 3 409 4 HOH HOH . K 4 HOH A 4 410 5 HOH HOH . K 4 HOH A 5 411 7 HOH HOH . K 4 HOH A 6 412 8 HOH HOH . K 4 HOH A 7 413 9 HOH HOH . K 4 HOH A 8 414 12 HOH HOH . K 4 HOH A 9 415 13 HOH HOH . K 4 HOH A 10 416 15 HOH HOH . K 4 HOH A 11 417 16 HOH HOH . K 4 HOH A 12 418 18 HOH HOH . K 4 HOH A 13 419 19 HOH HOH . K 4 HOH A 14 420 20 HOH HOH . K 4 HOH A 15 421 23 HOH HOH . K 4 HOH A 16 422 26 HOH HOH . K 4 HOH A 17 423 27 HOH HOH . K 4 HOH A 18 424 29 HOH HOH . K 4 HOH A 19 425 30 HOH HOH . K 4 HOH A 20 426 31 HOH HOH . K 4 HOH A 21 427 36 HOH HOH . K 4 HOH A 22 428 37 HOH HOH . K 4 HOH A 23 429 38 HOH HOH . K 4 HOH A 24 430 39 HOH HOH . K 4 HOH A 25 431 40 HOH HOH . K 4 HOH A 26 432 41 HOH HOH . K 4 HOH A 27 433 42 HOH HOH . K 4 HOH A 28 434 43 HOH HOH . K 4 HOH A 29 435 45 HOH HOH . K 4 HOH A 30 436 46 HOH HOH . K 4 HOH A 31 437 47 HOH HOH . K 4 HOH A 32 438 50 HOH HOH . K 4 HOH A 33 439 51 HOH HOH . K 4 HOH A 34 440 54 HOH HOH . K 4 HOH A 35 441 55 HOH HOH . K 4 HOH A 36 442 56 HOH HOH . K 4 HOH A 37 443 62 HOH HOH . K 4 HOH A 38 444 64 HOH HOH . K 4 HOH A 39 445 65 HOH HOH . K 4 HOH A 40 446 68 HOH HOH . K 4 HOH A 41 447 69 HOH HOH . K 4 HOH A 42 448 70 HOH HOH . K 4 HOH A 43 449 71 HOH HOH . K 4 HOH A 44 450 72 HOH HOH . K 4 HOH A 45 451 74 HOH HOH . K 4 HOH A 46 452 75 HOH HOH . K 4 HOH A 47 453 76 HOH HOH . K 4 HOH A 48 454 77 HOH HOH . K 4 HOH A 49 455 78 HOH HOH . K 4 HOH A 50 456 81 HOH HOH . K 4 HOH A 51 457 82 HOH HOH . K 4 HOH A 52 458 84 HOH HOH . K 4 HOH A 53 459 85 HOH HOH . K 4 HOH A 54 460 87 HOH HOH . K 4 HOH A 55 461 90 HOH HOH . K 4 HOH A 56 462 91 HOH HOH . K 4 HOH A 57 463 97 HOH HOH . K 4 HOH A 58 464 104 HOH HOH . K 4 HOH A 59 465 106 HOH HOH . K 4 HOH A 60 466 107 HOH HOH . K 4 HOH A 61 467 108 HOH HOH . K 4 HOH A 62 468 110 HOH HOH . K 4 HOH A 63 469 111 HOH HOH . K 4 HOH A 64 470 112 HOH HOH . K 4 HOH A 65 471 117 HOH HOH . K 4 HOH A 66 472 119 HOH HOH . K 4 HOH A 67 473 120 HOH HOH . K 4 HOH A 68 474 121 HOH HOH . K 4 HOH A 69 475 122 HOH HOH . K 4 HOH A 70 476 123 HOH HOH . K 4 HOH A 71 477 124 HOH HOH . K 4 HOH A 72 478 125 HOH HOH . K 4 HOH A 73 479 126 HOH HOH . K 4 HOH A 74 480 127 HOH HOH . K 4 HOH A 75 481 128 HOH HOH . K 4 HOH A 76 482 129 HOH HOH . K 4 HOH A 77 483 130 HOH HOH . L 4 HOH B 1 406 1 HOH HOH . L 4 HOH B 2 407 6 HOH HOH . L 4 HOH B 3 408 10 HOH HOH . L 4 HOH B 4 409 11 HOH HOH . L 4 HOH B 5 410 14 HOH HOH . L 4 HOH B 6 411 17 HOH HOH . L 4 HOH B 7 412 21 HOH HOH . L 4 HOH B 8 413 22 HOH HOH . L 4 HOH B 9 414 24 HOH HOH . L 4 HOH B 10 415 25 HOH HOH . L 4 HOH B 11 416 28 HOH HOH . L 4 HOH B 12 417 32 HOH HOH . L 4 HOH B 13 418 33 HOH HOH . L 4 HOH B 14 419 34 HOH HOH . L 4 HOH B 15 420 35 HOH HOH . L 4 HOH B 16 421 44 HOH HOH . L 4 HOH B 17 422 48 HOH HOH . L 4 HOH B 18 423 49 HOH HOH . L 4 HOH B 19 424 52 HOH HOH . L 4 HOH B 20 425 53 HOH HOH . L 4 HOH B 21 426 57 HOH HOH . L 4 HOH B 22 427 58 HOH HOH . L 4 HOH B 23 428 59 HOH HOH . L 4 HOH B 24 429 60 HOH HOH . L 4 HOH B 25 430 61 HOH HOH . L 4 HOH B 26 431 63 HOH HOH . L 4 HOH B 27 432 66 HOH HOH . L 4 HOH B 28 433 67 HOH HOH . L 4 HOH B 29 434 73 HOH HOH . L 4 HOH B 30 435 79 HOH HOH . L 4 HOH B 31 436 80 HOH HOH . L 4 HOH B 32 437 83 HOH HOH . L 4 HOH B 33 438 86 HOH HOH . L 4 HOH B 34 439 88 HOH HOH . L 4 HOH B 35 440 89 HOH HOH . L 4 HOH B 36 441 92 HOH HOH . L 4 HOH B 37 442 93 HOH HOH . L 4 HOH B 38 443 94 HOH HOH . L 4 HOH B 39 444 95 HOH HOH . L 4 HOH B 40 445 96 HOH HOH . L 4 HOH B 41 446 98 HOH HOH . L 4 HOH B 42 447 99 HOH HOH . L 4 HOH B 43 448 100 HOH HOH . L 4 HOH B 44 449 101 HOH HOH . L 4 HOH B 45 450 102 HOH HOH . L 4 HOH B 46 451 103 HOH HOH . L 4 HOH B 47 452 105 HOH HOH . L 4 HOH B 48 453 109 HOH HOH . L 4 HOH B 49 454 113 HOH HOH . L 4 HOH B 50 455 114 HOH HOH . L 4 HOH B 51 456 115 HOH HOH . L 4 HOH B 52 457 116 HOH HOH . L 4 HOH B 53 458 118 HOH HOH . L 4 HOH B 54 459 131 HOH HOH . L 4 HOH B 55 460 132 HOH HOH . L 4 HOH B 56 461 133 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . I 3 43.617 38.38 82.246 0.5 56.84 ? P PO4 403 B 1 HETATM 2 O O1 PO4 . . . I 3 43.647 38.668 80.766 0.5 56.13 ? O1 PO4 403 B 1 HETATM 3 O O2 PO4 . . . I 3 42.259 38.745 82.803 0.5 56.72 ? O2 PO4 403 B 1 HETATM 4 O O3 PO4 . . . I 3 43.863 36.904 82.459 0.5 56.64 ? O3 PO4 403 B 1 HETATM 5 O O4 PO4 . . . I 3 44.694 39.184 82.945 0.5 56.69 ? O4 PO4 403 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #