data_2HPJ # _model_server_result.job_id R_Dl8zLX_QeZ6bRpQkEedg _model_server_result.datetime_utc '2025-03-05 19:15:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2hpj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":152}' # _entry.id 2HPJ # _exptl.entry_id 2HPJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115.25 _cell.angle_gamma 90 _cell.entry_id 2HPJ _cell.length_a 66.641 _cell.length_b 52.042 _cell.length_c 34.946 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2HPJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 2HPJ _atom_sites.fract_transf_matrix[1][1] 0.015006 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007078 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019215 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.031639 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 150 150 GOL GOL . C 2 GOL A 1 152 152 GOL GOL . D 2 GOL A 1 153 153 GOL GOL . E 2 GOL A 1 154 154 GOL GOL . F 3 HOH A 1 155 1 HOH HOH . F 3 HOH A 2 156 2 HOH HOH . F 3 HOH A 3 157 3 HOH HOH . F 3 HOH A 4 158 4 HOH HOH . F 3 HOH A 5 159 5 HOH HOH . F 3 HOH A 6 160 6 HOH HOH . F 3 HOH A 7 161 7 HOH HOH . F 3 HOH A 8 162 8 HOH HOH . F 3 HOH A 9 163 9 HOH HOH . F 3 HOH A 10 164 10 HOH HOH . F 3 HOH A 11 165 11 HOH HOH . F 3 HOH A 12 166 12 HOH HOH . F 3 HOH A 13 167 13 HOH HOH . F 3 HOH A 14 168 14 HOH HOH . F 3 HOH A 15 169 15 HOH HOH . F 3 HOH A 16 170 16 HOH HOH . F 3 HOH A 17 171 17 HOH HOH . F 3 HOH A 18 172 18 HOH HOH . F 3 HOH A 19 173 19 HOH HOH . F 3 HOH A 20 174 20 HOH HOH . F 3 HOH A 21 175 21 HOH HOH . F 3 HOH A 22 176 22 HOH HOH . F 3 HOH A 23 177 23 HOH HOH . F 3 HOH A 24 178 24 HOH HOH . F 3 HOH A 25 179 25 HOH HOH . F 3 HOH A 26 180 26 HOH HOH . F 3 HOH A 27 181 27 HOH HOH . F 3 HOH A 28 182 28 HOH HOH . F 3 HOH A 29 183 29 HOH HOH . F 3 HOH A 30 184 30 HOH HOH . F 3 HOH A 31 185 31 HOH HOH . F 3 HOH A 32 186 32 HOH HOH . F 3 HOH A 33 187 33 HOH HOH . F 3 HOH A 34 188 34 HOH HOH . F 3 HOH A 35 189 35 HOH HOH . F 3 HOH A 36 190 36 HOH HOH . F 3 HOH A 37 191 37 HOH HOH . F 3 HOH A 38 192 38 HOH HOH . F 3 HOH A 39 193 39 HOH HOH . F 3 HOH A 40 194 40 HOH HOH . F 3 HOH A 41 195 41 HOH HOH . F 3 HOH A 42 196 42 HOH HOH . F 3 HOH A 43 197 43 HOH HOH . F 3 HOH A 44 198 44 HOH HOH . F 3 HOH A 45 199 45 HOH HOH . F 3 HOH A 46 200 46 HOH HOH . F 3 HOH A 47 201 47 HOH HOH . F 3 HOH A 48 202 48 HOH HOH . F 3 HOH A 49 203 49 HOH HOH . F 3 HOH A 50 204 50 HOH HOH . F 3 HOH A 51 205 51 HOH HOH . F 3 HOH A 52 206 52 HOH HOH . F 3 HOH A 53 207 53 HOH HOH . F 3 HOH A 54 208 54 HOH HOH . F 3 HOH A 55 209 55 HOH HOH . F 3 HOH A 56 210 56 HOH HOH . F 3 HOH A 57 211 57 HOH HOH . F 3 HOH A 58 212 58 HOH HOH . F 3 HOH A 59 213 59 HOH HOH . F 3 HOH A 60 214 60 HOH HOH . F 3 HOH A 61 215 61 HOH HOH . F 3 HOH A 62 216 62 HOH HOH . F 3 HOH A 63 217 63 HOH HOH . F 3 HOH A 64 218 64 HOH HOH . F 3 HOH A 65 219 65 HOH HOH . F 3 HOH A 66 220 66 HOH HOH . F 3 HOH A 67 221 67 HOH HOH . F 3 HOH A 68 222 68 HOH HOH . F 3 HOH A 69 223 69 HOH HOH . F 3 HOH A 70 224 70 HOH HOH . F 3 HOH A 71 225 71 HOH HOH . F 3 HOH A 72 226 72 HOH HOH . F 3 HOH A 73 227 73 HOH HOH . F 3 HOH A 74 228 75 HOH HOH . F 3 HOH A 75 229 76 HOH HOH . F 3 HOH A 76 230 77 HOH HOH . F 3 HOH A 77 231 78 HOH HOH . F 3 HOH A 78 232 79 HOH HOH . F 3 HOH A 79 233 80 HOH HOH . F 3 HOH A 80 234 81 HOH HOH . F 3 HOH A 81 235 82 HOH HOH . F 3 HOH A 82 236 83 HOH HOH . F 3 HOH A 83 237 84 HOH HOH . F 3 HOH A 84 238 85 HOH HOH . F 3 HOH A 85 239 86 HOH HOH . F 3 HOH A 86 240 87 HOH HOH . F 3 HOH A 87 241 88 HOH HOH . F 3 HOH A 88 242 89 HOH HOH . F 3 HOH A 89 243 90 HOH HOH . F 3 HOH A 90 244 91 HOH HOH . F 3 HOH A 91 245 92 HOH HOH . F 3 HOH A 92 246 93 HOH HOH . F 3 HOH A 93 247 94 HOH HOH . F 3 HOH A 94 248 95 HOH HOH . F 3 HOH A 95 249 96 HOH HOH . F 3 HOH A 96 250 97 HOH HOH . F 3 HOH A 97 251 98 HOH HOH . F 3 HOH A 98 252 99 HOH HOH . F 3 HOH A 99 253 100 HOH HOH . F 3 HOH A 100 254 102 HOH HOH . F 3 HOH A 101 255 103 HOH HOH . F 3 HOH A 102 256 104 HOH HOH . F 3 HOH A 103 257 105 HOH HOH . F 3 HOH A 104 258 106 HOH HOH . F 3 HOH A 105 259 107 HOH HOH . F 3 HOH A 106 260 108 HOH HOH . F 3 HOH A 107 261 109 HOH HOH . F 3 HOH A 108 262 110 HOH HOH . F 3 HOH A 109 263 111 HOH HOH . F 3 HOH A 110 264 112 HOH HOH . F 3 HOH A 111 265 113 HOH HOH . F 3 HOH A 112 266 114 HOH HOH . F 3 HOH A 113 267 116 HOH HOH . F 3 HOH A 114 268 117 HOH HOH . F 3 HOH A 115 269 118 HOH HOH . F 3 HOH A 116 270 119 HOH HOH . F 3 HOH A 117 271 120 HOH HOH . F 3 HOH A 118 272 121 HOH HOH . F 3 HOH A 119 273 122 HOH HOH . F 3 HOH A 120 274 123 HOH HOH . F 3 HOH A 121 275 124 HOH HOH . F 3 HOH A 122 276 125 HOH HOH . F 3 HOH A 123 277 126 HOH HOH . F 3 HOH A 124 278 127 HOH HOH . F 3 HOH A 125 279 128 HOH HOH . F 3 HOH A 126 280 129 HOH HOH . F 3 HOH A 127 281 130 HOH HOH . F 3 HOH A 128 282 131 HOH HOH . F 3 HOH A 129 283 132 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 2 46.84 43.566 14.002 1 33.31 ? C1 GOL 152 A 1 HETATM 2 O O1 GOL . . . C 2 46.52 42.756 15.11 1 34.64 ? O1 GOL 152 A 1 HETATM 3 C C2 GOL . . . C 2 47.516 42.774 12.889 1 36.23 ? C2 GOL 152 A 1 HETATM 4 O O2 GOL . . . C 2 48.617 42.028 13.387 1 39.2 ? O2 GOL 152 A 1 HETATM 5 C C3 GOL . . . C 2 47.975 43.704 11.77 1 34.91 ? C3 GOL 152 A 1 HETATM 6 O O3 GOL . . . C 2 48.038 45.058 12.205 1 34.27 ? O3 GOL 152 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #