data_2HPP
#
_model_server_result.job_id            eAIXB01Qah9EhbvP-_O0TA 
_model_server_result.datetime_utc      '2024-12-27 00:30:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2hpp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1}' 
#
_entry.id    2HPP 
#
_exptl.entry_id    2HPP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              450.962 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            D-phenylalanyl-N-[(3S)-6-carbamimidamido-1-chloro-2-oxohexan-3-yl]-L-prolinamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2HPP 
_cell.length_a            122.7 
_cell.length_b            122.7 
_cell.length_c            103.7 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2HPP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 9 L CYS 1 1_555 B SG CYS 119 H CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf2 B SG CYS 28 H CYS 42 1_555 B SG CYS 44 H CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf3 B SG CYS 173 H CYS 168 1_555 B SG CYS 187 H CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? 
disulf ? disulf4 B SG CYS 201 H CYS 191 1_555 B SG CYS 231 H CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf5 C SG CYS 1 P CYS 301 1_555 C SG CYS 79 P CYS 379 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? 
disulf ? disulf6 C SG CYS 22 P CYS 322 1_555 C SG CYS 62 P CYS 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.517 ? 
disulf ? disulf7 C SG CYS 50 P CYS 350 1_555 C SG CYS 74 P CYS 374 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? 
#
_chem_comp.formula           'C21 H31 Cl N6 O3' 
_chem_comp.formula_weight    450.962 
_chem_comp.id                0G7 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              D-phenylalanyl-N-[(3S)-6-carbamimidamido-1-chloro-2-oxohexan-3-yl]-L-prolinamide 
_chem_comp.type              peptide-like 
_chem_comp.pdbx_synonyms     'd-Phe-Pro-Arg chloromethylketone (PPACK)' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C O 0G7 doub 1 n n 
N CA 0G7 sing 2 n n 
N HN 0G7 sing 3 n n 
N HNA 0G7 sing 4 n n 
C1 CA1 0G7 sing 5 n n 
C1 O1 0G7 doub 6 n n 
N1 C 0G7 sing 7 n n 
N1 CA1 0G7 sing 8 n n 
C2 CA2 0G7 sing 9 n n 
C2 O2 0G7 doub 10 n n 
N2 C1 0G7 sing 11 n n 
N2 HN2 0G7 sing 12 n n 
C3 C2 0G7 sing 13 n n 
C3 CL1 0G7 sing 14 n n 
C3 H3 0G7 sing 15 n n 
C3 H3A 0G7 sing 16 n n 
CA C 0G7 sing 17 n n 
CA CB 0G7 sing 18 n n 
CA HA 0G7 sing 19 n n 
CB CG 0G7 sing 20 n n 
CB HB 0G7 sing 21 n n 
CB HBA 0G7 sing 22 n n 
CD N1 0G7 sing 23 n n 
CD CG1 0G7 sing 24 n n 
NE CD3 0G7 sing 25 n n 
NE CZ1 0G7 sing 26 n n 
NE HNE 0G7 sing 27 n n 
CG CD1 0G7 doub 28 n y 
CG CD2 0G7 sing 29 n y 
CZ HZ 0G7 sing 30 n n 
CA1 HA1 0G7 sing 31 n n 
CA2 N2 0G7 sing 32 n n 
CA2 CB2 0G7 sing 33 n n 
CA2 HA2 0G7 sing 34 n n 
CB1 CA1 0G7 sing 35 n n 
CB1 HB1 0G7 sing 36 n n 
CB1 HB1A 0G7 sing 37 n n 
CB2 HB2 0G7 sing 38 n n 
CB2 HB2A 0G7 sing 39 n n 
CD1 CE1 0G7 sing 40 n y 
CD1 HD1 0G7 sing 41 n n 
CD2 CE2 0G7 doub 42 n y 
CD2 HD2 0G7 sing 43 n n 
CD3 CG2 0G7 sing 44 n n 
CD3 HD3 0G7 sing 45 n n 
CD3 HD3A 0G7 sing 46 n n 
CE1 CZ 0G7 doub 47 n y 
CE1 HE1 0G7 sing 48 n n 
CE2 CZ 0G7 sing 49 n y 
CE2 HE2 0G7 sing 50 n n 
CG1 CB1 0G7 sing 51 n n 
CG2 CB2 0G7 sing 52 n n 
CG2 HG2 0G7 sing 53 n n 
CG2 HG2A 0G7 sing 54 n n 
NH1 HNH1 0G7 sing 55 n n 
NH1 HNHA 0G7 sing 56 n n 
NH2 CZ1 0G7 doub 57 n n 
NH2 HNH2 0G7 sing 58 n n 
CZ1 NH1 0G7 sing 59 n n 
CD HD 0G7 sing 60 n n 
CD H29 0G7 sing 61 n n 
CG1 HG1 0G7 sing 62 n n 
CG1 H31 0G7 sing 63 n n 
#
_atom_sites.entry_id                     2HPP 
_atom_sites.fract_transf_matrix[1][1]    0.00815 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00815 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009643 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 0G7 H 1 1 1 0G7 0G7 . 
E 5 HOH L 1 404 404 HOH HOH . 
E 5 HOH L 2 410 410 HOH HOH . 
E 5 HOH L 3 414 414 HOH HOH . 
E 5 HOH L 4 430 430 HOH HOH . 
E 5 HOH L 5 443 443 HOH HOH . 
E 5 HOH L 6 474 474 HOH HOH . 
E 5 HOH L 7 542 542 HOH HOH . 
E 5 HOH L 8 544 544 HOH HOH . 
E 5 HOH L 9 552 552 HOH HOH . 
E 5 HOH L 10 560 560 HOH HOH . 
E 5 HOH L 11 575 575 HOH HOH . 
E 5 HOH L 12 579 579 HOH HOH . 
E 5 HOH L 13 584 584 HOH HOH . 
E 5 HOH L 14 594 594 HOH HOH . 
F 5 HOH H 1 401 401 HOH HOH . 
F 5 HOH H 2 402 402 HOH HOH . 
F 5 HOH H 3 403 403 HOH HOH . 
F 5 HOH H 4 405 405 HOH HOH . 
F 5 HOH H 5 406 406 HOH HOH . 
F 5 HOH H 6 407 407 HOH HOH . 
F 5 HOH H 7 408 408 HOH HOH . 
F 5 HOH H 8 411 411 HOH HOH . 
F 5 HOH H 9 412 412 HOH HOH . 
F 5 HOH H 10 413 413 HOH HOH . 
F 5 HOH H 11 415 415 HOH HOH . 
F 5 HOH H 12 417 417 HOH HOH . 
F 5 HOH H 13 419 419 HOH HOH . 
F 5 HOH H 14 420 420 HOH HOH . 
F 5 HOH H 15 421 421 HOH HOH . 
F 5 HOH H 16 422 422 HOH HOH . 
F 5 HOH H 17 428 428 HOH HOH . 
F 5 HOH H 18 429 429 HOH HOH . 
F 5 HOH H 19 433 433 HOH HOH . 
F 5 HOH H 20 437 437 HOH HOH . 
F 5 HOH H 21 438 438 HOH HOH . 
F 5 HOH H 22 439 439 HOH HOH . 
F 5 HOH H 23 440 440 HOH HOH . 
F 5 HOH H 24 441 441 HOH HOH . 
F 5 HOH H 25 442 442 HOH HOH . 
F 5 HOH H 26 447 447 HOH HOH . 
F 5 HOH H 27 450 450 HOH HOH . 
F 5 HOH H 28 454 454 HOH HOH . 
F 5 HOH H 29 455 455 HOH HOH . 
F 5 HOH H 30 457 457 HOH HOH . 
F 5 HOH H 31 458 458 HOH HOH . 
F 5 HOH H 32 462 462 HOH HOH . 
F 5 HOH H 33 464 464 HOH HOH . 
F 5 HOH H 34 465 465 HOH HOH . 
F 5 HOH H 35 475 475 HOH HOH . 
F 5 HOH H 36 478 478 HOH HOH . 
F 5 HOH H 37 481 481 HOH HOH . 
F 5 HOH H 38 482 482 HOH HOH . 
F 5 HOH H 39 490 490 HOH HOH . 
F 5 HOH H 40 493 493 HOH HOH . 
F 5 HOH H 41 497 497 HOH HOH . 
F 5 HOH H 42 499 499 HOH HOH . 
F 5 HOH H 43 506 506 HOH HOH . 
F 5 HOH H 44 509 509 HOH HOH . 
F 5 HOH H 45 514 514 HOH HOH . 
F 5 HOH H 46 516 516 HOH HOH . 
F 5 HOH H 47 520 520 HOH HOH . 
F 5 HOH H 48 521 521 HOH HOH . 
F 5 HOH H 49 523 523 HOH HOH . 
F 5 HOH H 50 524 524 HOH HOH . 
F 5 HOH H 51 526 526 HOH HOH . 
F 5 HOH H 52 527 527 HOH HOH . 
F 5 HOH H 53 528 528 HOH HOH . 
F 5 HOH H 54 532 532 HOH HOH . 
F 5 HOH H 55 533 533 HOH HOH . 
F 5 HOH H 56 535 535 HOH HOH . 
F 5 HOH H 57 540 540 HOH HOH . 
F 5 HOH H 58 543 543 HOH HOH . 
F 5 HOH H 59 550 550 HOH HOH . 
F 5 HOH H 60 553 553 HOH HOH . 
F 5 HOH H 61 554 554 HOH HOH . 
F 5 HOH H 62 556 556 HOH HOH . 
F 5 HOH H 63 561 561 HOH HOH . 
F 5 HOH H 64 563 563 HOH HOH . 
F 5 HOH H 65 564 564 HOH HOH . 
F 5 HOH H 66 567 567 HOH HOH . 
F 5 HOH H 67 571 571 HOH HOH . 
F 5 HOH H 68 580 580 HOH HOH . 
F 5 HOH H 69 581 581 HOH HOH . 
F 5 HOH H 70 583 583 HOH HOH . 
F 5 HOH H 71 591 591 HOH HOH . 
F 5 HOH H 72 596 596 HOH HOH . 
F 5 HOH H 73 609 609 HOH HOH . 
F 5 HOH H 74 615 615 HOH HOH . 
F 5 HOH H 75 619 619 HOH HOH . 
F 5 HOH H 76 630 630 HOH HOH . 
F 5 HOH H 77 633 633 HOH HOH . 
F 5 HOH H 78 634 634 HOH HOH . 
F 5 HOH H 79 635 635 HOH HOH . 
G 5 HOH P 1 409 409 HOH HOH . 
G 5 HOH P 2 416 416 HOH HOH . 
G 5 HOH P 3 418 418 HOH HOH . 
G 5 HOH P 4 423 423 HOH HOH . 
G 5 HOH P 5 424 424 HOH HOH . 
G 5 HOH P 6 425 425 HOH HOH . 
G 5 HOH P 7 426 426 HOH HOH . 
G 5 HOH P 8 427 427 HOH HOH . 
G 5 HOH P 9 431 431 HOH HOH . 
G 5 HOH P 10 432 432 HOH HOH . 
G 5 HOH P 11 434 434 HOH HOH . 
G 5 HOH P 12 436 436 HOH HOH . 
G 5 HOH P 13 446 446 HOH HOH . 
G 5 HOH P 14 459 459 HOH HOH . 
G 5 HOH P 15 470 470 HOH HOH . 
G 5 HOH P 16 505 505 HOH HOH . 
G 5 HOH P 17 537 537 HOH HOH . 
G 5 HOH P 18 547 547 HOH HOH . 
G 5 HOH P 19 568 568 HOH HOH . 
G 5 HOH P 20 572 572 HOH HOH . 
G 5 HOH P 21 574 574 HOH HOH . 
G 5 HOH P 22 582 582 HOH HOH . 
G 5 HOH P 23 598 598 HOH HOH . 
G 5 HOH P 24 611 611 HOH HOH . 
G 5 HOH P 25 628 628 HOH HOH . 
G 5 HOH P 26 636 636 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N 0G7 . . . D 4 139.62 56.226 20.724 1 16.88 ? N 0G7 1 H 1 
HETATM 2 C CA 0G7 . . . D 4 140.086 55.34 21.799 1 16.71 ? CA 0G7 1 H 1 
HETATM 3 C C 0G7 . . . D 4 139.722 53.889 21.47 1 16.87 ? C 0G7 1 H 1 
HETATM 4 O O 0G7 . . . D 4 140.11 53.358 20.429 1 16.7 ? O 0G7 1 H 1 
HETATM 5 C CB 0G7 . . . D 4 141.572 55.394 22.128 1 15.39 ? CB 0G7 1 H 1 
HETATM 6 C CG 0G7 . . . D 4 141.873 54.938 23.529 1 14.8 ? CG 0G7 1 H 1 
HETATM 7 C CD1 0G7 . . . D 4 141.103 55.407 24.589 1 14.13 ? CD1 0G7 1 H 1 
HETATM 8 C CD2 0G7 . . . D 4 142.921 54.058 23.791 1 15.1 ? CD2 0G7 1 H 1 
HETATM 9 C CE1 0G7 . . . D 4 141.395 54.993 25.874 1 14.56 ? CE1 0G7 1 H 1 
HETATM 10 C CE2 0G7 . . . D 4 143.221 53.623 25.091 1 14.67 ? CE2 0G7 1 H 1 
HETATM 11 C CZ 0G7 . . . D 4 142.445 54.11 26.153 1 14.19 ? CZ 0G7 1 H 1 
HETATM 12 N N1 0G7 . . . D 4 139.04 53.3 22.436 1 17.24 ? N1 0G7 1 H 1 
HETATM 13 C CA1 0G7 . . . D 4 138.589 51.902 22.279 1 17.25 ? CA1 0G7 1 H 1 
HETATM 14 C C1 0G7 . . . D 4 137.793 51.914 20.972 1 17.06 ? C1 0G7 1 H 1 
HETATM 15 O O1 0G7 . . . D 4 137.016 52.884 20.792 1 17.49 ? O1 0G7 1 H 1 
HETATM 16 C CB1 0G7 . . . D 4 137.746 51.581 23.492 1 17.35 ? CB1 0G7 1 H 1 
HETATM 17 C CG1 0G7 . . . D 4 137.73 52.805 24.359 1 17.43 ? CG1 0G7 1 H 1 
HETATM 18 C CD 0G7 . . . D 4 138.566 53.889 23.695 1 17.38 ? CD 0G7 1 H 1 
HETATM 19 N N2 0G7 . . . D 4 138.081 50.916 20.173 1 16.34 ? N2 0G7 1 H 1 
HETATM 20 C CA2 0G7 . . . D 4 137.415 50.742 18.867 1 15.64 ? CA2 0G7 1 H 1 
HETATM 21 C C2 0G7 . . . D 4 136.288 49.746 19.15 1 15.61 ? C2 0G7 1 H 1 
HETATM 22 O O2 0G7 . . . D 4 135.518 49.289 18.299 1 16.28 ? O2 0G7 1 H 1 
HETATM 23 C CB2 0G7 . . . D 4 138.384 50.371 17.764 1 13.75 ? CB2 0G7 1 H 1 
HETATM 24 C CG2 0G7 . . . D 4 138.655 51.398 16.668 1 13.32 ? CG2 0G7 1 H 1 
HETATM 25 C CD3 0G7 . . . D 4 139.803 52.307 16.889 1 13.28 ? CD3 0G7 1 H 1 
HETATM 26 N NE 0G7 . . . D 4 140.154 53.256 15.826 1 11.5 ? NE 0G7 1 H 1 
HETATM 27 C CZ1 0G7 . . . D 4 140.912 52.808 14.81 1 11.24 ? CZ1 0G7 1 H 1 
HETATM 28 N NH1 0G7 . . . D 4 141.353 51.538 14.796 1 10.52 ? NH1 0G7 1 H 1 
HETATM 29 N NH2 0G7 . . . D 4 141.18 53.634 13.798 1 10.82 ? NH2 0G7 1 H 1 
HETATM 30 C C3 0G7 . . . D 4 136.219 49.444 20.372 1 15.35 ? C3 0G7 1 H 1 
#
_model_server_stats.io_time_ms              39 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           346 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           30 
#