data_2HT9 # _model_server_result.job_id TwaLivT6MkiX_IRyXNNa_g _model_server_result.datetime_utc '2024-11-22 23:28:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ht9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1001}' # _entry.id 2HT9 # _exptl.entry_id 2HT9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 175.82 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE2/S2 (INORGANIC) CLUSTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2HT9 _cell.length_a 111.754 _cell.length_b 111.754 _cell.length_c 51.647 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2HT9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 50 A CYS 28 1_555 A SG CYS 135 A CYS 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf2 B SG CYS 50 B CYS 28 1_555 B SG CYS 135 B CYS 113 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc1 A SG CYS 59 A CYS 37 1_555 E FE1 FES . A FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc2 D SG2 GSH . A GSH 200 1_555 E FE1 FES . A FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc3 E FE2 FES . A FES 1001 1_555 B SG CYS 59 B CYS 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc4 E FE2 FES . A FES 1001 1_555 F SG2 GSH . B GSH 1200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? # _chem_comp.formula 'Fe2 S2' _chem_comp.formula_weight 175.82 _chem_comp.id FES _chem_comp.mon_nstd_flag . _chem_comp.name 'FE2/S2 (INORGANIC) CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S1 FES sing 83 n n FE1 S2 FES sing 84 n n FE2 S1 FES sing 85 n n FE2 S2 FES sing 86 n n # _atom_sites.entry_id 2HT9 _atom_sites.fract_transf_matrix[1][1] 0.008948 _atom_sites.fract_transf_matrix[1][2] 0.005166 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010333 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019362 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 GSH A 1 200 200 GSH GSH . E 4 FES A 1 1001 1001 FES FES . F 3 GSH B 1 1200 1200 GSH GSH . G 5 HOH A 1 1002 3 HOH HOH . G 5 HOH A 2 1003 4 HOH HOH . G 5 HOH A 3 1004 6 HOH HOH . G 5 HOH A 4 1005 7 HOH HOH . G 5 HOH A 5 1006 10 HOH HOH . G 5 HOH A 6 1007 11 HOH HOH . G 5 HOH A 7 1008 12 HOH HOH . G 5 HOH A 8 1009 13 HOH HOH . G 5 HOH A 9 1010 14 HOH HOH . G 5 HOH A 10 1011 16 HOH HOH . G 5 HOH A 11 1012 17 HOH HOH . G 5 HOH A 12 1013 21 HOH HOH . G 5 HOH A 13 1014 22 HOH HOH . G 5 HOH A 14 1015 24 HOH HOH . G 5 HOH A 15 1016 25 HOH HOH . G 5 HOH A 16 1017 26 HOH HOH . G 5 HOH A 17 1018 30 HOH HOH . G 5 HOH A 18 1019 33 HOH HOH . G 5 HOH A 19 1020 35 HOH HOH . G 5 HOH A 20 1021 36 HOH HOH . G 5 HOH A 21 1022 39 HOH HOH . G 5 HOH A 22 1023 43 HOH HOH . G 5 HOH A 23 1024 44 HOH HOH . G 5 HOH A 24 1025 45 HOH HOH . G 5 HOH A 25 1026 46 HOH HOH . G 5 HOH A 26 1027 48 HOH HOH . G 5 HOH A 27 1028 50 HOH HOH . G 5 HOH A 28 1029 52 HOH HOH . G 5 HOH A 29 1030 55 HOH HOH . G 5 HOH A 30 1031 56 HOH HOH . G 5 HOH A 31 1032 57 HOH HOH . G 5 HOH A 32 1033 58 HOH HOH . G 5 HOH A 33 1034 60 HOH HOH . G 5 HOH A 34 1035 61 HOH HOH . G 5 HOH A 35 1036 65 HOH HOH . G 5 HOH A 36 1037 66 HOH HOH . G 5 HOH A 37 1038 68 HOH HOH . G 5 HOH A 38 1039 70 HOH HOH . G 5 HOH A 39 1040 74 HOH HOH . G 5 HOH A 40 1041 75 HOH HOH . G 5 HOH A 41 1042 78 HOH HOH . G 5 HOH A 42 1043 79 HOH HOH . G 5 HOH A 43 1044 80 HOH HOH . G 5 HOH A 44 1045 82 HOH HOH . G 5 HOH A 45 1046 86 HOH HOH . G 5 HOH A 46 1047 90 HOH HOH . G 5 HOH A 47 1048 97 HOH HOH . G 5 HOH A 48 1049 104 HOH HOH . G 5 HOH A 49 1050 109 HOH HOH . G 5 HOH A 50 1051 111 HOH HOH . G 5 HOH A 51 1052 113 HOH HOH . G 5 HOH A 52 1053 119 HOH HOH . G 5 HOH A 53 1054 121 HOH HOH . G 5 HOH A 54 1055 122 HOH HOH . G 5 HOH A 55 1056 136 HOH HOH . G 5 HOH A 56 1057 137 HOH HOH . G 5 HOH A 57 1058 140 HOH HOH . G 5 HOH A 58 1059 141 HOH HOH . G 5 HOH A 59 1060 142 HOH HOH . G 5 HOH A 60 1061 144 HOH HOH . G 5 HOH A 61 1062 145 HOH HOH . G 5 HOH A 62 1063 147 HOH HOH . G 5 HOH A 63 1064 148 HOH HOH . H 5 HOH B 1 1201 1 HOH HOH . H 5 HOH B 2 1202 2 HOH HOH . H 5 HOH B 3 1203 5 HOH HOH . H 5 HOH B 4 1204 8 HOH HOH . H 5 HOH B 5 1205 15 HOH HOH . H 5 HOH B 6 1206 19 HOH HOH . H 5 HOH B 7 1207 23 HOH HOH . H 5 HOH B 8 1208 27 HOH HOH . H 5 HOH B 9 1209 28 HOH HOH . H 5 HOH B 10 1210 29 HOH HOH . H 5 HOH B 11 1211 32 HOH HOH . H 5 HOH B 12 1212 38 HOH HOH . H 5 HOH B 13 1213 42 HOH HOH . H 5 HOH B 14 1214 47 HOH HOH . H 5 HOH B 15 1215 49 HOH HOH . H 5 HOH B 16 1216 54 HOH HOH . H 5 HOH B 17 1217 59 HOH HOH . H 5 HOH B 18 1218 62 HOH HOH . H 5 HOH B 19 1219 64 HOH HOH . H 5 HOH B 20 1220 67 HOH HOH . H 5 HOH B 21 1221 84 HOH HOH . H 5 HOH B 22 1222 85 HOH HOH . H 5 HOH B 23 1223 92 HOH HOH . H 5 HOH B 24 1224 102 HOH HOH . H 5 HOH B 25 1225 103 HOH HOH . H 5 HOH B 26 1226 115 HOH HOH . H 5 HOH B 27 1227 116 HOH HOH . H 5 HOH B 28 1228 117 HOH HOH . H 5 HOH B 29 1229 124 HOH HOH . H 5 HOH B 30 1230 125 HOH HOH . H 5 HOH B 31 1231 126 HOH HOH . H 5 HOH B 32 1232 128 HOH HOH . H 5 HOH B 33 1233 129 HOH HOH . H 5 HOH B 34 1234 130 HOH HOH . H 5 HOH B 35 1235 132 HOH HOH . H 5 HOH B 36 1236 133 HOH HOH . H 5 HOH B 37 1237 134 HOH HOH . H 5 HOH B 38 1238 135 HOH HOH . H 5 HOH B 39 1239 138 HOH HOH . H 5 HOH B 40 1240 139 HOH HOH . H 5 HOH B 41 1241 146 HOH HOH . H 5 HOH B 42 1242 152 HOH HOH . I 5 HOH X 1 110 110 HOH HOH . I 5 HOH X 2 118 118 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 FES . . . E 4 -13.121 41.121 -7.734 1 25.27 ? FE1 FES 1001 A 1 HETATM 2 FE FE2 FES . . . E 4 -10.537 41.993 -7.268 1 25.35 ? FE2 FES 1001 A 1 HETATM 3 S S1 FES . . . E 4 -11.911 42.528 -8.935 1 24.62 ? S1 FES 1001 A 1 HETATM 4 S S2 FES . . . E 4 -11.753 40.583 -6.064 1 28.4 ? S2 FES 1001 A 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #