data_2HU1
#
_model_server_result.job_id            L4f5bedWEQgXArANmEZMvA 
_model_server_result.datetime_utc      '2024-10-25 20:19:14' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2hu1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":9130}' 
#
_entry.id    2HU1 
#
_exptl.entry_id    2HU1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              264.317 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            UNDECA-3,7-DIENE-1,3,7,11-TETRACARBALDEHYDE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2HU1 
_cell.length_a            78.827 
_cell.length_b            78.827 
_cell.length_c            37.053 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2HU1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PQS monomeric 1 author_and_software_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 1 1 
A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 7_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 37.053 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             N 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
covale ? covale1 A NZ LYS 13 A LYS 13 1_555 N C14 220 . A 220 9130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.161 ? 
covale ? covale2 A NZ LYS 13 A LYS 13 1_555 N C9 220 . A 220 9130 8_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.209 ? 
covale ? covale3 A NZ LYS 13 A LYS 13 8_555 N C9 220 . A 220 9130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.209 ? 
metalc ? metalc1 A O ARG 21 A ARG 21 1_555 E NA NA . A NA 9504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.826 ? 
metalc ? metalc2 A O GLN 41 A GLN 41 1_555 I NA NA . A NA 9508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.701 ? 
metalc ? metalc3 A OG1 THR 43 A THR 43 1_555 I NA NA . A NA 9508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.776 ? 
metalc ? metalc4 A O GLY 49 A GLY 49 1_555 F NA NA . A NA 9505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.934 ? 
metalc ? metalc5 A OG1 THR 51 A THR 51 1_555 F NA NA . A NA 9505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.643 ? 
metalc ? metalc6 A O TYR 53 A TYR 53 1_555 G NA NA . A NA 9506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.848 ? 
metalc ? metalc7 A N ILE 55 A ILE 55 1_555 C NA NA . A NA 9502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.868 ? 
metalc ? metalc8 A N LEU 56 A LEU 56 1_555 G NA NA . A NA 9506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.939 ? 
metalc ? metalc9 A OD2 ASP 66 A ASP 66 1_555 F NA NA . A NA 9505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.706 ? 
metalc ? metalc10 A NE ARG 68 A ARG 68 1_555 F NA NA . A NA 9505 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.712 ? 
metalc ? metalc11 A O LEU 83 A LEU 83 1_555 C NA NA . A NA 9502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? 
metalc ? metalc12 A OG SER 91 A SER 91 1_555 G NA NA . A NA 9506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.795 ? 
metalc ? metalc13 B NA NA . A NA 9501 1_555 T O HOH . A HOH 9706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.817 ? 
metalc ? metalc14 C NA NA . A NA 9502 1_555 T O HOH . A HOH 9711 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.449 ? 
metalc ? metalc15 D NA NA . A NA 9503 1_555 T O HOH . A HOH 9716 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.822 ? 
metalc ? metalc16 H NA NA . A NA 9507 1_555 T O HOH . A HOH 9717 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? 
#
_chem_comp.formula           'C15 H20 O4' 
_chem_comp.formula_weight    264.317 
_chem_comp.id                220 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              UNDECA-3,7-DIENE-1,3,7,11-TETRACARBALDEHYDE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C1 220 doub 1 n n 
C1 C2 220 sing 2 n n 
C1 H1 220 sing 3 n n 
C2 C3 220 sing 4 n n 
C2 H21 220 sing 5 n n 
C2 H22 220 sing 6 n n 
C3 C4 220 sing 7 n n 
C3 H31 220 sing 8 n n 
C3 H32 220 sing 9 n n 
C4 C5 220 sing 10 n n 
C4 H41 220 sing 11 n n 
C4 H42 220 sing 12 n n 
C5 C6 220 doub 13 n n 
C5 H5 220 sing 14 n n 
C6 C7 220 sing 15 n n 
C6 C15 220 sing 16 n n 
C7 C8 220 sing 17 n n 
C7 H71 220 sing 18 n n 
C7 H72 220 sing 19 n n 
C8 C9 220 sing 20 n n 
C8 H81 220 sing 21 n n 
C8 H82 220 sing 22 n n 
C9 C10 220 doub 23 n n 
C9 H9 220 sing 24 n n 
C10 C11 220 sing 25 n n 
C10 C14 220 sing 26 n n 
C11 C12 220 sing 27 n n 
C11 H111 220 sing 28 n n 
C11 H112 220 sing 29 n n 
C12 C13 220 sing 30 n n 
C12 H121 220 sing 31 n n 
C12 H122 220 sing 32 n n 
C13 O2 220 doub 33 n n 
C13 H13 220 sing 34 n n 
C14 O3 220 doub 35 n n 
C14 H14 220 sing 36 n n 
C15 O4 220 doub 37 n n 
C15 H15 220 sing 38 n n 
#
_atom_sites.entry_id                     2HU1 
_atom_sites.fract_transf_matrix[1][1]    0.012686 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012686 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.026988 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NA A 1 9501 9501 NA NA . 
C 2 NA A 1 9502 9502 NA NA . 
D 2 NA A 1 9503 9503 NA NA . 
E 2 NA A 1 9504 9504 NA NA . 
F 2 NA A 1 9505 9505 NA NA . 
G 2 NA A 1 9506 9506 NA NA . 
H 2 NA A 1 9507 9507 NA NA . 
I 2 NA A 1 9508 9508 NA NA . 
J 3 CL A 1 9601 9601 CL CL . 
K 3 CL A 1 9602 9602 CL CL . 
L 3 CL A 1 9604 9604 CL CL . 
M 3 CL A 1 9606 9606 CL CL . 
N 4 220 A 1 9130 9130 220 220 . 
O 5 EDO A 1 9701 9701 EDO EDO . 
P 5 EDO A 1 9702 9702 EDO EDO . 
Q 5 EDO A 1 9703 9703 EDO EDO . 
R 5 EDO A 1 9704 9704 EDO EDO . 
S 5 EDO A 1 9705 9705 EDO EDO . 
T 6 HOH A 1 9706 1 HOH HOH . 
T 6 HOH A 2 9707 2 HOH HOH . 
T 6 HOH A 3 9708 3 HOH HOH . 
T 6 HOH A 4 9709 4 HOH HOH . 
T 6 HOH A 5 9710 5 HOH HOH . 
T 6 HOH A 6 9711 6 HOH HOH . 
T 6 HOH A 7 9712 7 HOH HOH . 
T 6 HOH A 8 9713 8 HOH HOH . 
T 6 HOH A 9 9714 9 HOH HOH . 
T 6 HOH A 10 9715 10 HOH HOH . 
T 6 HOH A 11 9716 11 HOH HOH . 
T 6 HOH A 12 9717 12 HOH HOH . 
T 6 HOH A 13 9718 13 HOH HOH . 
T 6 HOH A 14 9719 14 HOH HOH . 
T 6 HOH A 15 9720 15 HOH HOH . 
T 6 HOH A 16 9721 16 HOH HOH . 
T 6 HOH A 17 9722 17 HOH HOH . 
T 6 HOH A 18 9723 20 HOH HOH . 
T 6 HOH A 19 9724 21 HOH HOH . 
T 6 HOH A 20 9725 22 HOH HOH . 
T 6 HOH A 21 9726 23 HOH HOH . 
T 6 HOH A 22 9727 24 HOH HOH . 
T 6 HOH A 23 9728 25 HOH HOH . 
T 6 HOH A 24 9729 26 HOH HOH . 
T 6 HOH A 25 9730 27 HOH HOH . 
T 6 HOH A 26 9731 29 HOH HOH . 
T 6 HOH A 27 9732 57 HOH HOH . 
T 6 HOH A 28 9733 58 HOH HOH . 
T 6 HOH A 29 9734 59 HOH HOH . 
T 6 HOH A 30 9735 60 HOH HOH . 
T 6 HOH A 31 9736 61 HOH HOH . 
T 6 HOH A 32 9737 62 HOH HOH . 
T 6 HOH A 33 9738 63 HOH HOH . 
T 6 HOH A 34 9739 64 HOH HOH . 
T 6 HOH A 35 9740 65 HOH HOH . 
T 6 HOH A 36 9741 66 HOH HOH . 
T 6 HOH A 37 9742 69 HOH HOH . 
T 6 HOH A 38 9743 70 HOH HOH . 
T 6 HOH A 39 9744 71 HOH HOH . 
T 6 HOH A 40 9745 72 HOH HOH . 
T 6 HOH A 41 9746 73 HOH HOH . 
T 6 HOH A 42 9747 74 HOH HOH . 
T 6 HOH A 43 9748 75 HOH HOH . 
T 6 HOH A 44 9749 76 HOH HOH . 
T 6 HOH A 45 9750 77 HOH HOH . 
T 6 HOH A 46 9751 78 HOH HOH . 
T 6 HOH A 47 9752 79 HOH HOH . 
T 6 HOH A 48 9753 80 HOH HOH . 
T 6 HOH A 49 9754 81 HOH HOH . 
T 6 HOH A 50 9755 82 HOH HOH . 
T 6 HOH A 51 9756 83 HOH HOH . 
T 6 HOH A 52 9757 85 HOH HOH . 
T 6 HOH A 53 9758 86 HOH HOH . 
T 6 HOH A 54 9759 87 HOH HOH . 
T 6 HOH A 55 9760 88 HOH HOH . 
T 6 HOH A 56 9761 89 HOH HOH . 
T 6 HOH A 57 9762 90 HOH HOH . 
T 6 HOH A 58 9763 91 HOH HOH . 
T 6 HOH A 59 9764 92 HOH HOH . 
T 6 HOH A 60 9765 93 HOH HOH . 
T 6 HOH A 61 9766 94 HOH HOH . 
T 6 HOH A 62 9767 95 HOH HOH . 
T 6 HOH A 63 9768 96 HOH HOH . 
T 6 HOH A 64 9769 97 HOH HOH . 
T 6 HOH A 65 9770 98 HOH HOH . 
T 6 HOH A 66 9771 101 HOH HOH . 
T 6 HOH A 67 9772 102 HOH HOH . 
T 6 HOH A 68 9773 103 HOH HOH . 
T 6 HOH A 69 9774 104 HOH HOH . 
T 6 HOH A 70 9775 105 HOH HOH . 
T 6 HOH A 71 9776 106 HOH HOH . 
T 6 HOH A 72 9777 108 HOH HOH . 
T 6 HOH A 73 9778 109 HOH HOH . 
T 6 HOH A 74 9779 110 HOH HOH . 
T 6 HOH A 75 9780 112 HOH HOH . 
T 6 HOH A 76 9781 118 HOH HOH . 
T 6 HOH A 77 9782 123 HOH HOH . 
T 6 HOH A 78 9783 124 HOH HOH . 
T 6 HOH A 79 9784 129 HOH HOH . 
T 6 HOH A 80 9785 130 HOH HOH . 
T 6 HOH A 81 9786 131 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C6 220 . . . N 4 -19.565 18.438 4.624 0.25 40.52 ? C6 220 9130 A 1 
HETATM 2 C C7 220 . . . N 4 -19.075 19.576 5.527 0.25 39.74 ? C7 220 9130 A 1 
HETATM 3 C C8 220 . . . N 4 -18.546 19.097 6.885 0.25 43.87 ? C8 220 9130 A 1 
HETATM 4 C C9 220 . . . N 4 -19.592 18.722 7.941 0.25 47.57 ? C9 220 9130 A 1 
HETATM 5 C C10 220 . . . N 4 -19.726 19.577 9.195 0.5 48.54 ? C10 220 9130 A 1 
HETATM 6 C C11 220 . . . N 4 -20.207 20.998 9.006 0.25 49.03 ? C11 220 9130 A 1 
HETATM 7 C C12 220 . . . N 4 -19.35 22.14 9.454 0.25 49.39 ? C12 220 9130 A 1 
HETATM 8 C C13 220 . . . N 4 -20.232 23.192 10.102 0.25 51.04 ? C13 220 9130 A 1 
HETATM 9 O O2 220 . . . N 4 -20.148 24.252 9.13 0.25 53.29 ? O2 220 9130 A 1 
HETATM 10 C C14 220 . . . N 4 -18.487 19.498 10.108 0.5 51.71 ? C14 220 9130 A 1 
HETATM 11 C C15 220 . . . N 4 -19.851 18.827 3.167 0.25 39.37 ? C15 220 9130 A 1 
HETATM 12 O O4 220 . . . N 4 -20.053 17.6 2.432 0.5 35.45 ? O4 220 9130 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           12 
#