data_2HU2 # _model_server_result.job_id YasQWlWUu3F9svtfR3WnHQ _model_server_result.datetime_utc '2024-11-24 23:04:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2hu2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":600}' # _entry.id 2HU2 # _exptl.entry_id 2HU2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 663.425 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description NICOTINAMIDE-ADENINE-DINUCLEOTIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2HU2 _cell.length_a 89.31 _cell.length_b 89.31 _cell.length_c 162.72 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2HU2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/3 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 44.655 77.344729 54.24 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H27 N7 O14 P2' _chem_comp.formula_weight 663.425 _chem_comp.id NAD _chem_comp.mon_nstd_flag . _chem_comp.name NICOTINAMIDE-ADENINE-DINUCLEOTIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAD doub 241 n n PA O2A NAD sing 242 n n PA O5B NAD sing 243 n n PA O3 NAD sing 244 n n O2A HOA2 NAD sing 245 n n O5B C5B NAD sing 246 n n C5B C4B NAD sing 247 n n C5B H51A NAD sing 248 n n C5B H52A NAD sing 249 n n C4B O4B NAD sing 250 n n C4B C3B NAD sing 251 n n C4B H4B NAD sing 252 n n O4B C1B NAD sing 253 n n C3B O3B NAD sing 254 n n C3B C2B NAD sing 255 n n C3B H3B NAD sing 256 n n O3B HO3A NAD sing 257 n n C2B O2B NAD sing 258 n n C2B C1B NAD sing 259 n n C2B H2B NAD sing 260 n n O2B HO2A NAD sing 261 n n C1B N9A NAD sing 262 n n C1B H1B NAD sing 263 n n N9A C8A NAD sing 264 n y N9A C4A NAD sing 265 n y C8A N7A NAD doub 266 n y C8A H8A NAD sing 267 n n N7A C5A NAD sing 268 n y C5A C6A NAD sing 269 n y C5A C4A NAD doub 270 n y C6A N6A NAD sing 271 n n C6A N1A NAD doub 272 n y N6A H61A NAD sing 273 n n N6A H62A NAD sing 274 n n N1A C2A NAD sing 275 n y C2A N3A NAD doub 276 n y C2A H2A NAD sing 277 n n N3A C4A NAD sing 278 n y O3 PN NAD sing 279 n n PN O1N NAD doub 280 n n PN O2N NAD sing 281 n n PN O5D NAD sing 282 n n O5D C5D NAD sing 283 n n C5D C4D NAD sing 284 n n C5D H51N NAD sing 285 n n C5D H52N NAD sing 286 n n C4D O4D NAD sing 287 n n C4D C3D NAD sing 288 n n C4D H4D NAD sing 289 n n O4D C1D NAD sing 290 n n C3D O3D NAD sing 291 n n C3D C2D NAD sing 292 n n C3D H3D NAD sing 293 n n O3D HO3N NAD sing 294 n n C2D O2D NAD sing 295 n n C2D C1D NAD sing 296 n n C2D H2D NAD sing 297 n n O2D HO2N NAD sing 298 n n C1D N1N NAD sing 299 n n C1D H1D NAD sing 300 n n N1N C2N NAD sing 301 n y N1N C6N NAD doub 302 n y C2N C3N NAD doub 303 n y C2N H2N NAD sing 304 n n C3N C7N NAD sing 305 n n C3N C4N NAD sing 306 n y C7N O7N NAD doub 307 n n C7N N7N NAD sing 308 n n N7N H71N NAD sing 309 n n N7N H72N NAD sing 310 n n C4N C5N NAD doub 311 n y C4N H4N NAD sing 312 n n C5N C6N NAD sing 313 n y C5N H5N NAD sing 314 n n C6N H6N NAD sing 315 n n # _atom_sites.entry_id 2HU2 _atom_sites.fract_transf_matrix[1][1] 0.011197 _atom_sites.fract_transf_matrix[1][2] 0.006465 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012929 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006146 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAD A 1 600 600 NAD NAD . D 4 FMT A 1 801 801 FMT FMT . E 5 HOH A 1 501 501 HOH HOH . E 5 HOH A 2 502 502 HOH HOH . E 5 HOH A 3 503 503 HOH HOH . E 5 HOH A 4 504 504 HOH HOH . E 5 HOH A 5 505 505 HOH HOH . E 5 HOH A 6 506 506 HOH HOH . E 5 HOH A 7 507 507 HOH HOH . E 5 HOH A 8 508 508 HOH HOH . E 5 HOH A 9 509 509 HOH HOH . E 5 HOH A 10 510 510 HOH HOH . E 5 HOH A 11 511 511 HOH HOH . E 5 HOH A 12 512 512 HOH HOH . E 5 HOH A 13 513 513 HOH HOH . E 5 HOH A 14 514 514 HOH HOH . E 5 HOH A 15 515 515 HOH HOH . E 5 HOH A 16 516 516 HOH HOH . E 5 HOH A 17 517 517 HOH HOH . E 5 HOH A 18 518 518 HOH HOH . E 5 HOH A 19 519 519 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAD . . . C 3 4.007 25.515 26.608 1 54.82 ? PA NAD 600 A 1 HETATM 2 O O1A NAD . . . C 3 3.43 24.15 26.596 1 55.21 ? O1A NAD 600 A 1 HETATM 3 O O2A NAD . . . C 3 5.355 25.526 25.989 1 54.65 ? O2A NAD 600 A 1 HETATM 4 O O5B NAD . . . C 3 4.037 26.067 28.122 1 55.48 ? O5B NAD 600 A 1 HETATM 5 C C5B NAD . . . C 3 3.23 25.497 29.133 1 56.52 ? C5B NAD 600 A 1 HETATM 6 C C4B NAD . . . C 3 4.107 25.067 30.303 1 57.03 ? C4B NAD 600 A 1 HETATM 7 O O4B NAD . . . C 3 3.435 25.306 31.525 1 57.28 ? O4B NAD 600 A 1 HETATM 8 C C3B NAD . . . C 3 4.442 23.582 30.243 1 57.34 ? C3B NAD 600 A 1 HETATM 9 O O3B NAD . . . C 3 5.851 23.43 30.189 1 57.74 ? O3B NAD 600 A 1 HETATM 10 C C2B NAD . . . C 3 3.882 22.99 31.527 1 57.31 ? C2B NAD 600 A 1 HETATM 11 O O2B NAD . . . C 3 4.821 22.145 32.155 1 57.46 ? O2B NAD 600 A 1 HETATM 12 C C1B NAD . . . C 3 3.6 24.206 32.402 1 57.43 ? C1B NAD 600 A 1 HETATM 13 N N9A NAD . . . C 3 2.408 24.039 33.267 1 57.39 ? N9A NAD 600 A 1 HETATM 14 C C8A NAD . . . C 3 1.252 23.356 32.976 1 57.51 ? C8A NAD 600 A 1 HETATM 15 N N7A NAD . . . C 3 0.414 23.45 34.033 1 57.19 ? N7A NAD 600 A 1 HETATM 16 C C5A NAD . . . C 3 1.011 24.183 34.995 1 56.95 ? C5A NAD 600 A 1 HETATM 17 C C6A NAD . . . C 3 0.599 24.579 36.264 1 56.94 ? C6A NAD 600 A 1 HETATM 18 N N6A NAD . . . C 3 -0.46 24.002 36.82 1 57.25 ? N6A NAD 600 A 1 HETATM 19 N N1A NAD . . . C 3 1.44 25.346 37.046 1 56.88 ? N1A NAD 600 A 1 HETATM 20 C C2A NAD . . . C 3 2.683 25.714 36.566 1 56.92 ? C2A NAD 600 A 1 HETATM 21 N N3A NAD . . . C 3 3.086 25.314 35.305 1 56.75 ? N3A NAD 600 A 1 HETATM 22 C C4A NAD . . . C 3 2.266 24.559 34.53 1 56.98 ? C4A NAD 600 A 1 HETATM 23 O O3 NAD . . . C 3 3.035 26.526 25.813 1 54.34 ? O3 NAD 600 A 1 HETATM 24 P PN NAD . . . C 3 3.282 28.118 25.773 1 53.74 ? PN NAD 600 A 1 HETATM 25 O O1N NAD . . . C 3 4.64 28.45 26.264 1 53.89 ? O1N NAD 600 A 1 HETATM 26 O O2N NAD . . . C 3 2.853 28.624 24.448 1 54.04 ? O2N NAD 600 A 1 HETATM 27 O O5D NAD . . . C 3 2.223 28.587 26.886 1 53.95 ? O5D NAD 600 A 1 HETATM 28 C C5D NAD . . . C 3 1.555 29.819 26.772 1 54.72 ? C5D NAD 600 A 1 HETATM 29 C C4D NAD . . . C 3 0.073 29.628 27.059 1 55.4 ? C4D NAD 600 A 1 HETATM 30 O O4D NAD . . . C 3 -0.56 30.876 26.9 1 55.45 ? O4D NAD 600 A 1 HETATM 31 C C3D NAD . . . C 3 -0.58 28.655 26.087 1 56.12 ? C3D NAD 600 A 1 HETATM 32 O O3D NAD . . . C 3 -0.962 27.475 26.755 1 56.76 ? O3D NAD 600 A 1 HETATM 33 C C2D NAD . . . C 3 -1.789 29.375 25.525 1 56.11 ? C2D NAD 600 A 1 HETATM 34 O O2D NAD . . . C 3 -2.977 28.841 26.065 1 56.26 ? O2D NAD 600 A 1 HETATM 35 C C1D NAD . . . C 3 -1.63 30.817 25.979 1 55.88 ? C1D NAD 600 A 1 HETATM 36 N N1N NAD . . . C 3 -1.374 31.743 24.856 1 56.16 ? N1N NAD 600 A 1 HETATM 37 C C2N NAD . . . C 3 -2.211 32.817 24.717 1 56.22 ? C2N NAD 600 A 1 HETATM 38 C C3N NAD . . . C 3 -2.034 33.74 23.689 1 56.05 ? C3N NAD 600 A 1 HETATM 39 C C7N NAD . . . C 3 -2.635 35.108 23.837 1 56.36 ? C7N NAD 600 A 1 HETATM 40 O O7N NAD . . . C 3 -3.086 35.785 22.684 1 56.41 ? O7N NAD 600 A 1 HETATM 41 N N7N NAD . . . C 3 -2.734 35.66 25.056 1 56.62 ? N7N NAD 600 A 1 HETATM 42 C C4N NAD . . . C 3 -0.986 33.552 22.793 1 55.94 ? C4N NAD 600 A 1 HETATM 43 C C5N NAD . . . C 3 -0.131 32.462 22.935 1 55.91 ? C5N NAD 600 A 1 HETATM 44 C C6N NAD . . . C 3 -0.334 31.559 23.978 1 56.07 ? C6N NAD 600 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 348 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 44 #