data_2HVV # _model_server_result.job_id KYUImjmRdspGK_0_O7l3NA _model_server_result.datetime_utc '2024-11-22 22:32:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2hvv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":153}' # _entry.id 2HVV # _exptl.entry_id 2HVV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2HVV _cell.length_a 113.233 _cell.length_b 113.233 _cell.length_c 113.233 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2HVV _symmetry.cell_setting ? _symmetry.Int_Tables_number 198 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 3' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 3 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 88 A CYS 54 1_555 A SG CYS 100 A CYS 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? disulf ? disulf2 B SG CYS 88 B CYS 54 1_555 B SG CYS 100 B CYS 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? metalc ? metalc1 A SG CYS 58 A CYS 24 1_555 H ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? metalc ? metalc2 A SG CYS 88 A CYS 54 1_555 H ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.721 ? metalc ? metalc3 A ND1 HIS 93 A HIS 59 1_555 H ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.515 ? metalc ? metalc4 A SG CYS 100 A CYS 66 1_555 H ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc5 A ND1 HIS 105 A HIS 71 1_555 G ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc6 A SG CYS 133 A CYS 99 1_555 G ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.551 ? metalc ? metalc7 A SG CYS 136 A CYS 102 1_555 G ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.523 ? metalc ? metalc8 G ZN ZN . A ZN 501 1_555 O O HOH . A HOH 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc9 B SG CYS 58 B CYS 24 1_555 M ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.491 ? metalc ? metalc10 B ND1 HIS 93 B HIS 59 1_555 M ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc11 B SG CYS 100 B CYS 66 1_555 M ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? metalc ? metalc12 B ND1 HIS 105 B HIS 71 1_555 N ZN ZN . B ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? metalc ? metalc13 B SG CYS 133 B CYS 99 1_555 N ZN ZN . B ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.698 ? metalc ? metalc14 B SG CYS 136 B CYS 102 1_555 N ZN ZN . B ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? metalc ? metalc15 N ZN ZN . B ZN 503 1_555 P O HOH . B HOH 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.477 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 2HVV _atom_sites.fract_transf_matrix[1][1] 0.008831 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008831 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008831 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 151 101 SO4 SO4 . D 2 SO4 A 1 152 102 SO4 SO4 . E 2 SO4 A 1 153 104 SO4 SO4 . F 2 SO4 A 1 154 108 SO4 SO4 . G 3 ZN A 1 501 501 ZN ZN . H 3 ZN A 1 504 504 ZN ZN . I 2 SO4 B 1 151 103 SO4 SO4 . J 2 SO4 B 1 152 105 SO4 SO4 . K 2 SO4 B 1 153 106 SO4 SO4 . L 2 SO4 B 1 154 107 SO4 SO4 . M 3 ZN B 1 502 502 ZN ZN . N 3 ZN B 1 503 503 ZN ZN . O 4 HOH A 1 505 1 HOH HOH . O 4 HOH A 2 506 3 HOH HOH . O 4 HOH A 3 507 7 HOH HOH . O 4 HOH A 4 508 8 HOH HOH . O 4 HOH A 5 509 9 HOH HOH . O 4 HOH A 6 510 10 HOH HOH . O 4 HOH A 7 511 11 HOH HOH . O 4 HOH A 8 512 12 HOH HOH . O 4 HOH A 9 513 13 HOH HOH . O 4 HOH A 10 514 16 HOH HOH . O 4 HOH A 11 515 20 HOH HOH . O 4 HOH A 12 516 21 HOH HOH . O 4 HOH A 13 517 22 HOH HOH . O 4 HOH A 14 518 23 HOH HOH . O 4 HOH A 15 519 27 HOH HOH . O 4 HOH A 16 520 34 HOH HOH . P 4 HOH B 1 504 2 HOH HOH . P 4 HOH B 2 505 4 HOH HOH . P 4 HOH B 3 506 5 HOH HOH . P 4 HOH B 4 507 6 HOH HOH . P 4 HOH B 5 508 14 HOH HOH . P 4 HOH B 6 509 15 HOH HOH . P 4 HOH B 7 510 17 HOH HOH . P 4 HOH B 8 511 18 HOH HOH . P 4 HOH B 9 512 19 HOH HOH . P 4 HOH B 10 513 24 HOH HOH . P 4 HOH B 11 514 25 HOH HOH . P 4 HOH B 12 515 26 HOH HOH . P 4 HOH B 13 516 28 HOH HOH . P 4 HOH B 14 517 29 HOH HOH . P 4 HOH B 15 518 30 HOH HOH . P 4 HOH B 16 519 31 HOH HOH . P 4 HOH B 17 520 32 HOH HOH . P 4 HOH B 18 521 33 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . E 2 23.745 23.482 -18.676 1 107.13 ? S SO4 153 A 1 HETATM 2 O O1 SO4 . . . E 2 23.946 22.508 -19.766 1 106.92 ? O1 SO4 153 A 1 HETATM 3 O O2 SO4 . . . E 2 23.762 24.849 -19.232 1 107.08 ? O2 SO4 153 A 1 HETATM 4 O O3 SO4 . . . E 2 22.441 23.231 -18.027 1 106.86 ? O3 SO4 153 A 1 HETATM 5 O O4 SO4 . . . E 2 24.827 23.34 -17.682 1 107.31 ? O4 SO4 153 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #