data_2HW5 # _model_server_result.job_id HY5aIzeCYMskMcH5wwRf7A _model_server_result.datetime_utc '2024-11-28 13:25:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2hw5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":1}' # _entry.id 2HW5 # _exptl.entry_id 2HW5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 835.608 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CROTONYL COENZYME A' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2HW5 _cell.length_a 91.554 _cell.length_b 97.344 _cell.length_c 231.796 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2HW5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C OE2 GLU 160 C GLU 164 1_555 I MG MG . C MG 291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.739 ? metalc ? metalc2 D OE2 GLU 160 D GLU 164 1_555 L MG MG . D MG 291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.058 ? # _chem_comp.formula 'C25 H40 N7 O17 P3 S' _chem_comp.formula_weight 835.608 _chem_comp.id COO _chem_comp.mon_nstd_flag . _chem_comp.name 'CROTONYL COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C13 O1 COO sing 70 n n C13 H13 COO sing 71 n n C13 C1 COO sing 72 n n C13 C11 COO sing 73 n n C11 C15 COO sing 74 n n C11 C14 COO sing 75 n n C11 C12 COO sing 76 n n C14 H141 COO sing 77 n n C14 H142 COO sing 78 n n C14 H143 COO sing 79 n n C12 H121 COO sing 80 n n C12 H122 COO sing 81 n n C12 O6A COO sing 82 n n O6A P2A COO sing 83 n n P2A O4A COO doub 84 n n P2A O5A COO sing 85 n n P2A O3A COO sing 86 n n O5A H5A COO sing 87 n n O3A P1A COO sing 88 n n P1A O2A COO doub 89 n n P1A O1A COO sing 90 n n P1A O5X COO sing 91 n n O1A H1A COO sing 92 n n O5X C5X COO sing 93 n n C5X H5X1 COO sing 94 n n C5X H5X2 COO sing 95 n n C5X C4X COO sing 96 n n C4X H4X COO sing 97 n n C4X O4X COO sing 98 n n C4X C3X COO sing 99 n n O4X C1X COO sing 100 n n C3X C2X COO sing 101 n n C3X H3X COO sing 102 n n C3X O3X COO sing 103 n n O3X P3X COO sing 104 n n P3X O9A COO doub 105 n n P3X O7A COO sing 106 n n P3X O8A COO sing 107 n n O7A H7A COO sing 108 n n O8A H2 COO sing 109 n n C2X C1X COO sing 110 n n C2X H2X COO sing 111 n n C2X O2X COO sing 112 n n O2X H1 COO sing 113 n n C1X H1X COO sing 114 n n C1X N9A COO sing 115 n n N9A C8A COO sing 116 n y N9A C4A COO sing 117 n y C8A H8A COO sing 118 n n C8A N7A COO doub 119 n y N7A C5A COO sing 120 n y C5A C6A COO doub 121 n y C5A C4A COO sing 122 n y C4A N3A COO doub 123 n y N3A C2A COO sing 124 n y C2A N1A COO doub 125 n y C2A H2A COO sing 126 n n N1A C6A COO sing 127 n y C6A N6A COO sing 128 n n N6A H6A1 COO sing 129 n n N6A H6A2 COO sing 130 n n O1 HO1 COO sing 131 n n C1 O2 COO doub 132 n n C1 N1 COO sing 133 n n N1 HN1 COO sing 134 n n N1 C2 COO sing 135 n n C2 H21 COO sing 136 n n C2 H22 COO sing 137 n n C2 C3 COO sing 138 n n C3 H31 COO sing 139 n n C3 H32 COO sing 140 n n C3 C4 COO sing 141 n n C4 O3 COO doub 142 n n C4 N2 COO sing 143 n n N2 HN2 COO sing 144 n n N2 C5 COO sing 145 n n C5 H51 COO sing 146 n n C5 H52 COO sing 147 n n C5 C6 COO sing 148 n n C6 H61 COO sing 149 n n C6 H62 COO sing 150 n n C6 S1 COO sing 151 n n S1 C7 COO sing 152 n n C7 O4 COO doub 153 n n C7 C8 COO sing 154 n n C8 H8 COO sing 155 n n C8 C9 COO doub 156 n n C9 H9 COO sing 157 n n C9 C10 COO sing 158 n n C10 H101 COO sing 159 n n C10 H102 COO sing 160 n n C10 H103 COO sing 161 n n C15 H151 COO sing 162 n n C15 H152 COO sing 163 n n C15 H153 COO sing 164 n n # _atom_sites.entry_id 2HW5 _atom_sites.fract_transf_matrix[1][1] 0.010923 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010273 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004314 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 MG A 1 291 3 MG MG . H 3 COO B 1 1 1 COO COO . I 2 MG C 1 291 1 MG MG . J 2 MG C 1 292 4 MG MG . K 3 COO C 1 2 2 COO COO . L 2 MG D 1 291 2 MG MG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C13 COO . . . H 3 -10.317 25.669 43.313 1 82.68 ? C13 COO 1 B 1 HETATM 2 C C11 COO . . . H 3 -9.638 27.012 43.537 1 83.14 ? C11 COO 1 B 1 HETATM 3 C C14 COO . . . H 3 -8.119 26.845 43.607 1 83.27 ? C14 COO 1 B 1 HETATM 4 C C12 COO . . . H 3 -10.11 28.053 42.5 1 83.18 ? C12 COO 1 B 1 HETATM 5 O O6A COO . . . H 3 -11.016 29.001 43.166 1 83.51 ? O6A COO 1 B 1 HETATM 6 P P2A COO . . . H 3 -12.58 29.41 42.764 1 80.79 ? P2A COO 1 B 1 HETATM 7 O O4A COO . . . H 3 -13.138 30.334 43.981 1 82.22 ? O4A COO 1 B 1 HETATM 8 O O5A COO . . . H 3 -12.592 30.264 41.387 1 81.36 ? O5A COO 1 B 1 HETATM 9 O O3A COO . . . H 3 -13.558 28.21 42.553 1 83.2 ? O3A COO 1 B 1 HETATM 10 P P1A COO . . . H 3 -14.178 27.399 43.79 1 85.51 ? P1A COO 1 B 1 HETATM 11 O O2A COO . . . H 3 -12.943 26.833 44.732 1 84.56 ? O2A COO 1 B 1 HETATM 12 O O1A COO . . . H 3 -15.182 28.2 44.581 1 86.06 ? O1A COO 1 B 1 HETATM 13 O O5X COO . . . H 3 -14.658 26.095 43.013 1 84.37 ? O5X COO 1 B 1 HETATM 14 C C5X COO . . . H 3 -15.824 25.99 42.213 1 82.98 ? C5X COO 1 B 1 HETATM 15 C C4X COO . . . H 3 -16.36 24.575 42.417 1 81.97 ? C4X COO 1 B 1 HETATM 16 O O4X COO . . . H 3 -15.343 23.604 41.979 1 80.1 ? O4X COO 1 B 1 HETATM 17 C C3X COO . . . H 3 -16.517 24.351 43.925 1 82.15 ? C3X COO 1 B 1 HETATM 18 O O3X COO . . . H 3 -17.586 23.439 44.156 1 84.36 ? O3X COO 1 B 1 HETATM 19 P P3X COO . . . H 3 -18.617 23.827 45.312 1 86.22 ? P3X COO 1 B 1 HETATM 20 O O9A COO . . . H 3 -19.951 22.951 45.027 1 85.62 ? O9A COO 1 B 1 HETATM 21 O O7A COO . . . H 3 -18.973 25.374 44.981 1 84.8 ? O7A COO 1 B 1 HETATM 22 O O8A COO . . . H 3 -18.054 23.591 46.661 1 87.1 ? O8A COO 1 B 1 HETATM 23 C C2X COO . . . H 3 -15.191 23.708 44.315 1 80.88 ? C2X COO 1 B 1 HETATM 24 O O2X COO . . . H 3 -15.339 22.985 45.541 1 80.45 ? O2X COO 1 B 1 HETATM 25 C C1X COO . . . H 3 -15.004 22.768 43.122 1 78.07 ? C1X COO 1 B 1 HETATM 26 N N9A COO . . . H 3 -13.608 22.323 42.952 1 77.01 ? N9A COO 1 B 1 HETATM 27 C C8A COO . . . H 3 -12.587 23.091 42.578 1 76.42 ? C8A COO 1 B 1 HETATM 28 N N7A COO . . . H 3 -11.477 22.355 42.528 1 76.69 ? N7A COO 1 B 1 HETATM 29 C C5A COO . . . H 3 -11.786 21.108 42.87 1 76.51 ? C5A COO 1 B 1 HETATM 30 C C4A COO . . . H 3 -13.147 21.091 43.137 1 76.68 ? C4A COO 1 B 1 HETATM 31 N N3A COO . . . H 3 -13.725 19.941 43.511 1 76.6 ? N3A COO 1 B 1 HETATM 32 C C2A COO . . . H 3 -13.004 18.832 43.619 1 76.36 ? C2A COO 1 B 1 HETATM 33 N N1A COO . . . H 3 -11.702 18.821 43.364 1 76.18 ? N1A COO 1 B 1 HETATM 34 C C6A COO . . . H 3 -11.061 19.927 42.993 1 75.9 ? C6A COO 1 B 1 HETATM 35 N N6A COO . . . H 3 -9.759 19.873 42.747 1 76.42 ? N6A COO 1 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 43 _model_server_stats.query_time_ms 251 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 35 #