data_2HWF # _model_server_result.job_id GO_DMnwqWu-nauEHIqjeXw _model_server_result.datetime_utc '2025-07-15 08:51:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2hwf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":700}' # _entry.id 2HWF # _exptl.entry_id 2HWF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 284.356 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-METHOXY-6-[4-(3-METHYLPHENYL)-1-PIPERAZINYL]PYRIDAZINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2HWF _cell.length_a 341.3 _cell.length_b 341.3 _cell.length_c 465.9 _cell.Z_PDB 120 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2HWF _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? 240-MERIC 240 'complete icosahedral assembly' 1 ? tetrameric 4 'icosahedral asymmetric unit' 2 ? eicosameric 20 'icosahedral pentamer' 3 ? 24-meric 24 'icosahedral 23 hexamer' 4 ? tetrameric 4 'icosahedral asymmetric unit, std point frame' 5 ? 40-meric 40 'crystal asymmetric unit, crystal frame' 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 (1-60) A,B,C,D,E 2 1 A,B,C,D,E 3 (1-5) A,B,C,D,E 4 (1,2,6,10,23,24) A,B,C,D,E 5 P A,B,C,D,E 6 (X0)(1-5,26-30) # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] X0 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 P 'transform to point frame' ? ? -0.467102 -0.808989 0.356864 0.866026 -0.5 0.000078 0.178369 0.30909 0.934157 117.85075 -98.53391 -169.6976 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'point symmetry operation' ? ? 0.563631 -0.755762 0.333384 0.755813 0.309017 -0.577282 0.333266 0.57735 0.745386 110.09668 6.33845 -84.09901 3 'point symmetry operation' ? ? -0.142429 -0.467035 0.872693 0.46717 -0.809017 -0.356712 0.87262 0.35689 0.333412 139.323 140.05852 -106.43423 4 'point symmetry operation' ? ? -0.142429 0.46717 0.872621 -0.467034 -0.809017 0.35689 0.872693 -0.356712 0.333412 47.28918 216.36362 -36.13915 5 'point symmetry operation' ? ? 0.563631 0.755813 0.333267 -0.755761 0.309017 0.57735 0.333384 -0.577282 0.745386 -38.81717 129.8027 29.64083 6 'point symmetry operation' ? ? -0.936369 0.110264 0.333249 0.110264 -0.808927 0.577476 0.333249 0.577476 0.745296 280.76242 92.1461 -84.09802 7 'point symmetry operation' ? ? -0.333367 0.934147 -0.127424 -0.356796 0.000101 0.934182 0.872675 0.35689 0.333266 150.34426 50.59327 -106.42678 8 'point symmetry operation' ? ? 0.475678 0.467044 -0.745386 0.110306 0.809034 0.577318 0.872676 -0.356838 0.333322 130.27897 -67.25197 -36.11335 9 'point symmetry operation' ? ? 0.372693 -0.645523 -0.666633 0.866051 0.499955 0.000058 0.333249 -0.57736 0.745386 248.29609 -98.53152 29.67149 10 'point symmetry operation' ? ? -0.5 -0.866026 0 0.866025 -0.5 0.000156 -0.000135 0.000078 1 341.29998 -0.01809 0.01533 11 'point symmetry operation' ? ? 0.5 -0.866026 0.000135 -0.866025 -0.5 -0.000078 0.000135 -0.000078 -1 170.63434 295.58346 232.93467 12 'point symmetry operation' ? ? -0.372693 -0.645419 0.666734 -0.866051 0.499955 -0.000136 -0.333249 -0.577476 -0.745296 220.18209 197.0743 317.04802 13 'point symmetry operation' ? ? -0.475678 0.467161 0.745313 -0.110306 0.808944 -0.577444 -0.872675 -0.35689 -0.333266 118.98721 104.90527 339.37678 14 'point symmetry operation' ? ? 0.333367 0.934166 0.127279 0.356796 -0.000045 -0.934182 -0.872676 0.356838 -0.333322 6.89759 146.45084 269.06335 15 'point symmetry operation' ? ? 0.936369 0.110212 -0.333267 -0.110264 -0.809017 -0.57735 -0.333249 0.57736 -0.745386 38.81727 264.29644 203.27851 16 'point symmetry operation' ? ? -0.563631 0.755762 -0.333384 0.755761 0.308927 -0.577398 -0.333384 -0.577398 -0.745296 231.20332 6.36968 317.06335 17 'point symmetry operation' ? ? 0.142429 0.467034 -0.872693 0.467034 -0.809073 -0.356764 -0.872693 -0.356764 -0.333356 201.97705 140.09322 339.37777 18 'point symmetry operation' ? ? 0.142429 -0.46717 -0.87262 -0.46717 -0.808961 0.356838 -0.87262 0.356838 -0.333467 294.0109 216.38742 269.07081 19 'point symmetry operation' ? ? -0.563631 -0.755813 -0.333266 -0.755813 0.309107 0.577234 -0.333266 0.577234 -0.745476 380.11722 129.81629 203.3043 20 'point symmetry operation' ? ? -1 0 0 0 1 -0.000156 0 -0.000156 -1 341.3 0.0182 232.96533 21 'point symmetry operation' ? ? -0.333367 -0.934166 -0.127279 0.356932 -0.000101 -0.93413 0.87262 -0.356838 0.333467 334.40247 146.42717 -36.12081 22 'point symmetry operation' ? ? -0.936369 -0.110212 0.333266 -0.110212 -0.809107 -0.577234 0.333266 -0.577234 0.745476 302.48284 264.28299 29.6457 23 'point symmetry operation' ? ? -0.5 0.866026 -0.000135 -0.866025 -0.5 0.000078 0 0.000156 1 170.66578 295.56534 -0.01533 24 'point symmetry operation' ? ? 0.372693 0.64542 -0.666734 -0.865999 0.500045 -0.00002 0.333384 0.577398 0.745296 121.11799 197.04307 -84.11335 25 'point symmetry operation' ? ? 0.475678 -0.46716 -0.745314 -0.11017 0.809 -0.577392 0.872693 0.356764 0.333356 222.31284 104.87061 -106.42777 26 'point symmetry operation' ? ? 0.166733 0.645413 -0.745414 -0.645529 -0.5 -0.577315 -0.745313 0.577444 0.333266 165.42984 325.18945 147.95292 27 'point symmetry operation' ? ? 0.333367 -0.356932 -0.872621 -0.934146 0.000045 -0.35689 0.127424 0.93413 -0.333412 250.56614 299.50122 41.52915 28 'point symmetry operation' ? ? -0.372693 -0.866051 -0.333249 -0.645419 0.499955 -0.577476 0.666733 -0.000136 -0.745296 358.39285 226.66923 89.51868 29 'point symmetry operation' ? ? -0.975695 -0.178359 0.127307 -0.178359 0.308872 -0.93423 0.127307 -0.93423 -0.333177 339.89712 207.34481 225.60162 30 'point symmetry operation' ? ? -0.642311 0.755778 -0.127425 -0.178427 -0.309134 -0.93413 -0.745386 -0.577266 0.333412 220.63943 268.23366 261.71597 31 'point symmetry operation' ? ? 0.642311 0.755797 0.127307 0.178427 -0.308989 0.934179 0.745386 -0.577318 -0.333322 -28.25325 -10.28916 84.97874 32 'point symmetry operation' ? ? 0.975695 -0.178379 -0.127279 0.178359 0.309017 0.934182 -0.127307 -0.934178 0.333322 36.54723 -71.16693 191.41599 33 'point symmetry operation' ? ? 0.372693 -0.866 0.333384 0.645419 0.500045 0.577398 -0.666733 -0.00002 0.745296 153.54143 -128.13528 143.44664 34 'point symmetry operation' ? ? -0.333367 -0.356796 0.872676 0.934146 0.0001 0.35689 -0.127425 0.934182 0.333266 161.04735 -102.4659 7.36272 35 'point symmetry operation' ? ? -0.166734 0.645529 0.745314 0.645529 -0.49991 0.577392 0.745313 0.577392 -0.333356 48.69206 -29.63299 -28.77243 36 'point symmetry operation' ? ? -0.475678 -0.467044 0.745386 0.11017 0.80909 0.577267 -0.872693 0.356712 -0.333412 211.02101 -67.22821 269.08915 37 'point symmetry operation' ? ? -0.372693 0.645523 0.666633 0.865999 0.500045 -0.000058 -0.333384 0.577282 -0.745386 93.00387 -98.51804 203.30917 38 'point symmetry operation' ? ? 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 0.00002 -0.00004 232.95 39 'point symmetry operation' ? ? 0.936369 -0.110264 -0.333249 0.110213 -0.809017 0.57736 -0.333266 -0.57735 -0.745386 60.53762 92.17726 317.04901 40 'point symmetry operation' ? ? 0.333367 -0.934147 0.127425 -0.356932 0.000045 0.934131 -0.87262 -0.35689 -0.333412 190.95576 50.62796 339.38423 41 'point symmetry operation' ? ? -0.333367 0.356932 0.872621 -0.934166 -0.0001 -0.356838 -0.127279 -0.93413 0.333467 90.73398 299.51284 191.38958 42 'point symmetry operation' ? ? 0.372693 0.866052 0.333249 -0.645523 0.499955 -0.57736 -0.666633 0.000058 0.745386 -17.09276 226.67334 143.41137 43 'point symmetry operation' ? ? 0.975695 0.178359 -0.127307 -0.178379 0.309017 -0.934179 -0.127279 0.934182 0.333322 1.40296 207.32776 7.33144 44 'point symmetry operation' ? ? 0.642311 -0.755778 0.127424 -0.178311 -0.309045 -0.934182 0.745413 0.577314 -0.333266 120.66068 268.21104 -28.79237 45 'point symmetry operation' ? ? -0.166734 -0.645414 0.745414 -0.645413 -0.50009 -0.577366 0.745414 -0.577366 -0.333177 175.87028 325.18455 84.96181 46 'point symmetry operation' ? ? 0.642311 0.178427 0.745386 0.755797 -0.308989 -0.577318 0.127307 0.934178 -0.333322 -43.35873 67.23425 41.53401 47 'point symmetry operation' ? ? 0.745296 0.000052 0.666734 0.000052 -1 0.00002 0.666733 0.00002 -0.745296 -34.19767 197.03838 89.50336 48 'point symmetry operation' ? ? 0.642311 -0.178311 0.745414 -0.755777 -0.309045 0.577315 0.127425 -0.934182 -0.333266 -8.21438 190.70401 225.58728 49 'point symmetry operation' ? ? 0.475678 -0.11017 0.872693 -0.46716 0.809 0.356764 -0.745313 -0.577392 0.333356 -1.31687 56.98501 261.72243 50 'point symmetry operation' ? ? 0.475678 0.110306 0.872676 0.467044 0.809034 -0.356838 -0.745386 0.577318 0.333322 -23.03727 -19.32349 147.97126 51 'point symmetry operation' ? ? -0.475678 0.110171 -0.872693 -0.467044 0.80909 0.356712 0.745386 0.577266 -0.333412 342.6169 56.96249 -28.76597 52 'point symmetry operation' ? ? -0.475678 -0.110306 -0.872676 0.46716 0.808944 -0.35689 0.745313 -0.577444 -0.333266 364.33727 -19.32831 84.99708 53 'point symmetry operation' ? ? -0.642311 -0.178427 -0.745386 0.755777 -0.309135 -0.577267 -0.127424 -0.93413 0.333412 384.65875 67.246 191.42085 54 'point symmetry operation' ? ? -0.745296 -0.000052 -0.666734 -0.000052 -1 0.000136 -0.666733 0.000136 0.745296 375.49775 197.04266 143.43132 55 'point symmetry operation' ? ? -0.642311 0.178311 -0.745414 -0.755797 -0.308899 0.577366 -0.127307 0.93423 0.333177 349.51446 190.6871 7.34838 56 'point symmetry operation' ? ? 0.166734 -0.64553 -0.745313 0.645413 -0.5 0.577444 -0.745413 -0.577314 0.333266 292.60793 -29.61034 261.74237 57 'point symmetry operation' ? ? -0.642311 -0.755797 -0.127307 0.178311 -0.3089 0.93423 -0.745414 0.577366 0.333177 369.55324 -10.28417 147.98819 58 'point symmetry operation' ? ? -0.975695 0.178379 0.127279 0.178379 0.309162 0.934131 0.127279 0.93413 -0.333467 304.75274 -71.17853 41.56042 59 'point symmetry operation' ? ? -0.372693 0.866 -0.333384 0.645523 0.500045 0.577282 0.666633 -0.000058 -0.745386 187.75852 -128.13947 89.53863 60 'point symmetry operation' ? ? 0.333367 0.356796 -0.872676 0.934166 -0.000045 0.356838 0.127279 -0.934182 -0.333322 180.25261 -102.44892 225.61856 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C16 H20 N4 O' _chem_comp.formula_weight 284.356 _chem_comp.id JEN _chem_comp.mon_nstd_flag . _chem_comp.name 3-METHOXY-6-[4-(3-METHYLPHENYL)-1-PIPERAZINYL]PYRIDAZINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O2 JEN sing 171 n n C1 H11 JEN sing 172 n n C1 H12 JEN sing 173 n n C1 H13 JEN sing 174 n n O2 C3 JEN sing 175 n n C3 N4 JEN doub 176 n y C3 C8 JEN sing 177 n y N4 N5 JEN sing 178 n y N5 C6 JEN doub 179 n y C6 C7 JEN sing 180 n y C6 N9 JEN sing 181 n n C7 C8 JEN doub 182 n y C7 H7 JEN sing 183 n n C8 H8 JEN sing 184 n n N9 C10 JEN sing 185 n n N9 C14 JEN sing 186 n n C10 C11 JEN sing 187 n n C10 H101 JEN sing 188 n n C10 H102 JEN sing 189 n n C11 N12 JEN sing 190 n n C11 H111 JEN sing 191 n n C11 H112 JEN sing 192 n n N12 C13 JEN sing 193 n n N12 C15 JEN sing 194 n n C13 C14 JEN sing 195 n n C13 H131 JEN sing 196 n n C13 H132 JEN sing 197 n n C14 H141 JEN sing 198 n n C14 H142 JEN sing 199 n n C15 C16 JEN doub 200 n y C15 C20 JEN sing 201 n y C16 C17 JEN sing 202 n y C16 H16 JEN sing 203 n n C17 C18 JEN doub 204 n y C17 C21 JEN sing 205 n n C18 C19 JEN sing 206 n y C18 H18 JEN sing 207 n n C19 C20 JEN doub 208 n y C19 H19 JEN sing 209 n n C20 H20 JEN sing 210 n n C21 H211 JEN sing 211 n n C21 H212 JEN sing 212 n n C21 H213 JEN sing 213 n n # _atom_sites.entry_id 2HWF _atom_sites.fract_transf_matrix[1][1] 0.00293 _atom_sites.fract_transf_matrix[1][2] 0.001692 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.003383 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002146 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id E _pdbx_nonpoly_scheme.entity_id 5 _pdbx_nonpoly_scheme.mon_id JEN _pdbx_nonpoly_scheme.pdb_strand_id 1 _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 700 _pdbx_nonpoly_scheme.auth_seq_num 700 _pdbx_nonpoly_scheme.pdb_mon_id JEN _pdbx_nonpoly_scheme.auth_mon_id JEN _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 JEN . . . E 5 220.455 83.224 235.834 1 0 ? C1 JEN 700 1 1 HETATM 2 O O2 JEN . . . E 5 220.931 83.804 234.629 1 0 ? O2 JEN 700 1 1 HETATM 3 C C3 JEN . . . E 5 222.253 83.807 234.411 1 0 ? C3 JEN 700 1 1 HETATM 4 N N4 JEN . . . E 5 222.804 82.857 233.701 1 0 ? N4 JEN 700 1 1 HETATM 5 N N5 JEN . . . E 5 224.146 82.893 233.493 1 0 ? N5 JEN 700 1 1 HETATM 6 C C6 JEN . . . E 5 224.888 83.88 233.988 1 0 ? C6 JEN 700 1 1 HETATM 7 C C7 JEN . . . E 5 224.3 84.914 234.782 1 0 ? C7 JEN 700 1 1 HETATM 8 C C8 JEN . . . E 5 222.975 84.875 234.98 1 0 ? C8 JEN 700 1 1 HETATM 9 N N9 JEN . . . E 5 226.227 83.925 233.666 1 0 ? N9 JEN 700 1 1 HETATM 10 C C10 JEN . . . E 5 226.712 85.019 232.833 1 0 ? C10 JEN 700 1 1 HETATM 11 C C11 JEN . . . E 5 228.209 85.125 232.907 1 0 ? C11 JEN 700 1 1 HETATM 12 N N12 JEN . . . E 5 228.873 83.872 232.552 1 0 ? N12 JEN 700 1 1 HETATM 13 C C13 JEN . . . E 5 228.328 82.741 233.322 1 0 ? C13 JEN 700 1 1 HETATM 14 C C14 JEN . . . E 5 226.845 82.666 233.237 1 0 ? C14 JEN 700 1 1 HETATM 15 C C15 JEN . . . E 5 230.259 83.878 232.356 1 0 ? C15 JEN 700 1 1 HETATM 16 C C16 JEN . . . E 5 230.997 82.715 232.17 1 0 ? C16 JEN 700 1 1 HETATM 17 C C17 JEN . . . E 5 232.377 82.712 232.035 1 0 ? C17 JEN 700 1 1 HETATM 18 C C18 JEN . . . E 5 233.052 83.91 232.112 1 0 ? C18 JEN 700 1 1 HETATM 19 C C19 JEN . . . E 5 232.352 85.075 232.293 1 0 ? C19 JEN 700 1 1 HETATM 20 C C20 JEN . . . E 5 230.993 85.074 232.396 1 0 ? C20 JEN 700 1 1 HETATM 21 C C21 JEN . . . E 5 233.11 81.41 231.809 1 0 ? C21 JEN 700 1 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 21 #