data_2HYP # _model_server_result.job_id ahul-dJmD3-Gd8oYV9elNg _model_server_result.datetime_utc '2024-11-21 14:39:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2hyp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":555}' # _entry.id 2HYP # _exptl.entry_id 2HYP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2HYP _cell.length_a 55.297 _cell.length_b 93.709 _cell.length_c 50.924 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2HYP _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 23 A ASP 21 1_555 B FE FE . A FE 444 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? metalc ? metalc2 A NE2 HIS 25 A HIS 23 1_555 B FE FE . A FE 444 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc3 A OD2 ASP 65 A ASP 63 1_555 B FE FE . A FE 444 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? metalc ? metalc4 A OD2 ASP 65 A ASP 63 1_555 C MN MN . A MN 555 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? metalc ? metalc5 A OD1 ASN 99 A ASN 97 1_555 C MN MN . A MN 555 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? metalc ? metalc6 A NE2 HIS 171 A HIS 169 1_555 C MN MN . A MN 555 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? metalc ? metalc7 A ND1 HIS 209 A HIS 207 1_555 C MN MN . A MN 555 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? metalc ? metalc8 A NE2 HIS 211 A HIS 209 1_555 B FE FE . A FE 444 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc9 H O1 CAC . A CAC 400 1_555 B FE FE . A FE 444 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc10 H O2 CAC . A CAC 400 1_555 C MN MN . A MN 555 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc11 B FE FE . A FE 444 1_555 I O HOH . A HOH 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.964 ? metalc ? metalc12 C MN MN . A MN 555 1_555 I O HOH . A HOH 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2HYP _atom_sites.fract_transf_matrix[1][1] 0.018084 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010671 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019637 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FE A 1 444 444 FE FE . C 3 MN A 1 555 555 MN MN . D 4 BR A 1 301 301 BR BR . E 4 BR A 1 302 302 BR BR . F 4 BR A 1 303 303 BR BR . G 4 BR A 1 304 304 BR BR . H 5 CAC A 1 400 400 CAC CAC . I 6 HOH A 1 556 1 HOH HOH . I 6 HOH A 2 557 2 HOH HOH . I 6 HOH A 3 558 3 HOH HOH . I 6 HOH A 4 559 4 HOH HOH . I 6 HOH A 5 560 5 HOH HOH . I 6 HOH A 6 561 6 HOH HOH . I 6 HOH A 7 562 7 HOH HOH . I 6 HOH A 8 563 8 HOH HOH . I 6 HOH A 9 564 9 HOH HOH . I 6 HOH A 10 565 10 HOH HOH . I 6 HOH A 11 566 11 HOH HOH . I 6 HOH A 12 567 12 HOH HOH . I 6 HOH A 13 568 13 HOH HOH . I 6 HOH A 14 569 14 HOH HOH . I 6 HOH A 15 570 15 HOH HOH . I 6 HOH A 16 571 16 HOH HOH . I 6 HOH A 17 572 17 HOH HOH . I 6 HOH A 18 573 18 HOH HOH . I 6 HOH A 19 574 19 HOH HOH . I 6 HOH A 20 575 20 HOH HOH . I 6 HOH A 21 576 21 HOH HOH . I 6 HOH A 22 577 22 HOH HOH . I 6 HOH A 23 578 23 HOH HOH . I 6 HOH A 24 579 24 HOH HOH . I 6 HOH A 25 580 25 HOH HOH . I 6 HOH A 26 581 26 HOH HOH . I 6 HOH A 27 582 27 HOH HOH . I 6 HOH A 28 583 28 HOH HOH . I 6 HOH A 29 584 29 HOH HOH . I 6 HOH A 30 585 30 HOH HOH . I 6 HOH A 31 586 31 HOH HOH . I 6 HOH A 32 587 32 HOH HOH . I 6 HOH A 33 588 33 HOH HOH . I 6 HOH A 34 589 34 HOH HOH . I 6 HOH A 35 590 35 HOH HOH . I 6 HOH A 36 591 36 HOH HOH . I 6 HOH A 37 592 37 HOH HOH . I 6 HOH A 38 593 38 HOH HOH . I 6 HOH A 39 594 39 HOH HOH . I 6 HOH A 40 595 40 HOH HOH . I 6 HOH A 41 596 41 HOH HOH . I 6 HOH A 42 597 42 HOH HOH . I 6 HOH A 43 598 43 HOH HOH . I 6 HOH A 44 599 44 HOH HOH . I 6 HOH A 45 600 45 HOH HOH . I 6 HOH A 46 601 46 HOH HOH . I 6 HOH A 47 602 47 HOH HOH . I 6 HOH A 48 603 48 HOH HOH . I 6 HOH A 49 604 49 HOH HOH . I 6 HOH A 50 605 50 HOH HOH . I 6 HOH A 51 606 51 HOH HOH . I 6 HOH A 52 607 52 HOH HOH . I 6 HOH A 53 608 53 HOH HOH . I 6 HOH A 54 609 54 HOH HOH . I 6 HOH A 55 610 55 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 8.431 _atom_site.Cartn_y 15.673 _atom_site.Cartn_z -12.12 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 40.69 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 555 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #