data_2HZH
#
_model_server_result.job_id            xF7zN5dFNhYmcuuw6WX5QQ 
_model_server_result.datetime_utc      '2024-11-22 10:48:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2hzh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":503}' 
#
_entry.id    2HZH 
#
_exptl.entry_id    2HZH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              180.156 
_entity.id                          3 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            alpha-D-mannopyranose 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2HZH 
_cell.length_a            168.93 
_cell.length_b            168.93 
_cell.length_c            69.35 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2HZH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        150 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 3 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 85 A CYS 85 1_555 A SG CYS 488 A CYS 488 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf2 A SG CYS 117 A CYS 117 1_555 A SG CYS 205 A CYS 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
covale ? covale1 A ND2 ASN 436 A ASN 436 1_555 D C1 MAN . A MAN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? 
metalc ? metalc1 A NE2 HIS 64 A HIS 64 1_555 J CU CU . A CU 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.919 ? 
metalc ? metalc2 A ND1 HIS 66 A HIS 66 1_555 I CU CU . A CU 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
metalc ? metalc3 A NE2 HIS 109 A HIS 109 1_555 I CU CU . A CU 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? 
metalc ? metalc4 A NE2 HIS 111 A HIS 111 1_555 H CU CU . A CU 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
metalc ? metalc5 A NE2 HIS 398 A HIS 398 1_555 J CU CU . A CU 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.894 ? 
metalc ? metalc6 A NE2 HIS 400 A HIS 400 1_555 H CU CU . A CU 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
metalc ? metalc7 A NE2 HIS 452 A HIS 452 1_555 H CU CU . A CU 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.966 ? 
metalc ? metalc8 A NE2 HIS 454 A HIS 454 1_555 I CU CU . A CU 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? 
metalc ? metalc9 A ND1 HIS 458 A HIS 458 1_555 G CU CU . A CU 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? 
metalc ? metalc10 H CU CU . A CU 602 1_555 K O HOH . A HOH 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.973 ? 
#
_chem_comp.formula           'C6 H12 O6' 
_chem_comp.formula_weight    180.156 
_chem_comp.id                MAN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              alpha-D-mannopyranose 
_chem_comp.type              'd-saccharide, alpha linking' 
_chem_comp.pdbx_synonyms     alpha-D-mannose;D-mannose;mannose 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 MAN sing 218 n n 
C1 O1 MAN sing 219 n n 
C1 O5 MAN sing 220 n n 
C1 H1 MAN sing 221 n n 
C2 C3 MAN sing 222 n n 
C2 O2 MAN sing 223 n n 
C2 H2 MAN sing 224 n n 
C3 C4 MAN sing 225 n n 
C3 O3 MAN sing 226 n n 
C3 H3 MAN sing 227 n n 
C4 C5 MAN sing 228 n n 
C4 O4 MAN sing 229 n n 
C4 H4 MAN sing 230 n n 
C5 C6 MAN sing 231 n n 
C5 O5 MAN sing 232 n n 
C5 H5 MAN sing 233 n n 
C6 O6 MAN sing 234 n n 
C6 H61 MAN sing 235 n n 
C6 H62 MAN sing 236 n n 
O1 HO1 MAN sing 237 n n 
O2 HO2 MAN sing 238 n n 
O3 HO3 MAN sing 239 n n 
O4 HO4 MAN sing 240 n n 
O6 HO6 MAN sing 241 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
MAN DManpa 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
MAN a-D-mannopyranose 'COMMON NAME' GMML 1 
MAN a-D-Manp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
MAN Man 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     2HZH 
_atom_sites.fract_transf_matrix[1][1]    0.00592 
_atom_sites.fract_transf_matrix[1][2]    0.003418 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006835 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01442 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NDG A 1 501 501 NDG NAG . 
C 2 NDG A 1 502 502 NDG NAG . 
D 3 MAN A 1 503 503 MAN MAN . 
E 4 NAG A 1 504 504 NAG NAG . 
F 4 NAG A 1 505 505 NAG NAG . 
G 5 CU A 1 601 601 CU CU . 
H 5 CU A 1 602 602 CU CU . 
I 5 CU A 1 603 603 CU CU . 
J 5 CU A 1 604 604 CU CU . 
K 6 HOH A 1 605 1 HOH HOH . 
K 6 HOH A 2 606 2 HOH HOH . 
K 6 HOH A 3 607 3 HOH HOH . 
K 6 HOH A 4 608 4 HOH HOH . 
K 6 HOH A 5 609 5 HOH HOH . 
K 6 HOH A 6 610 6 HOH HOH . 
K 6 HOH A 7 611 7 HOH HOH . 
K 6 HOH A 8 612 8 HOH HOH . 
K 6 HOH A 9 613 9 HOH HOH . 
K 6 HOH A 10 614 10 HOH HOH . 
K 6 HOH A 11 615 11 HOH HOH . 
K 6 HOH A 12 616 12 HOH HOH . 
K 6 HOH A 13 617 13 HOH HOH . 
K 6 HOH A 14 618 14 HOH HOH . 
K 6 HOH A 15 619 15 HOH HOH . 
K 6 HOH A 16 620 16 HOH HOH . 
K 6 HOH A 17 621 17 HOH HOH . 
K 6 HOH A 18 622 18 HOH HOH . 
K 6 HOH A 19 623 19 HOH HOH . 
K 6 HOH A 20 624 20 HOH HOH . 
K 6 HOH A 21 625 21 HOH HOH . 
K 6 HOH A 22 626 22 HOH HOH . 
K 6 HOH A 23 627 23 HOH HOH . 
K 6 HOH A 24 628 24 HOH HOH . 
K 6 HOH A 25 629 25 HOH HOH . 
K 6 HOH A 26 630 26 HOH HOH . 
K 6 HOH A 27 631 27 HOH HOH . 
K 6 HOH A 28 632 28 HOH HOH . 
K 6 HOH A 29 633 29 HOH HOH . 
K 6 HOH A 30 634 30 HOH HOH . 
K 6 HOH A 31 635 31 HOH HOH . 
K 6 HOH A 32 636 32 HOH HOH . 
K 6 HOH A 33 637 33 HOH HOH . 
K 6 HOH A 34 638 34 HOH HOH . 
K 6 HOH A 35 639 35 HOH HOH . 
K 6 HOH A 36 640 37 HOH HOH . 
K 6 HOH A 37 641 39 HOH HOH . 
K 6 HOH A 38 642 40 HOH HOH . 
K 6 HOH A 39 643 41 HOH HOH . 
K 6 HOH A 40 644 42 HOH HOH . 
K 6 HOH A 41 645 43 HOH HOH . 
K 6 HOH A 42 646 44 HOH HOH . 
K 6 HOH A 43 647 45 HOH HOH . 
K 6 HOH A 44 648 46 HOH HOH . 
K 6 HOH A 45 649 47 HOH HOH . 
K 6 HOH A 46 650 48 HOH HOH . 
K 6 HOH A 47 651 49 HOH HOH . 
K 6 HOH A 48 652 50 HOH HOH . 
K 6 HOH A 49 653 51 HOH HOH . 
K 6 HOH A 50 654 53 HOH HOH . 
K 6 HOH A 51 655 54 HOH HOH . 
K 6 HOH A 52 656 56 HOH HOH . 
K 6 HOH A 53 657 57 HOH HOH . 
K 6 HOH A 54 658 58 HOH HOH . 
K 6 HOH A 55 659 59 HOH HOH . 
K 6 HOH A 56 660 60 HOH HOH . 
K 6 HOH A 57 661 61 HOH HOH . 
K 6 HOH A 58 662 62 HOH HOH . 
K 6 HOH A 59 663 65 HOH HOH . 
K 6 HOH A 60 664 66 HOH HOH . 
K 6 HOH A 61 665 68 HOH HOH . 
K 6 HOH A 62 666 69 HOH HOH . 
K 6 HOH A 63 667 72 HOH HOH . 
K 6 HOH A 64 668 73 HOH HOH . 
K 6 HOH A 65 669 75 HOH HOH . 
K 6 HOH A 66 670 76 HOH HOH . 
K 6 HOH A 67 671 77 HOH HOH . 
K 6 HOH A 68 672 78 HOH HOH . 
K 6 HOH A 69 673 79 HOH HOH . 
K 6 HOH A 70 674 80 HOH HOH . 
K 6 HOH A 71 675 82 HOH HOH . 
K 6 HOH A 72 676 83 HOH HOH . 
K 6 HOH A 73 677 84 HOH HOH . 
K 6 HOH A 74 678 85 HOH HOH . 
K 6 HOH A 75 679 86 HOH HOH . 
K 6 HOH A 76 680 87 HOH HOH . 
K 6 HOH A 77 681 88 HOH HOH . 
K 6 HOH A 78 682 90 HOH HOH . 
K 6 HOH A 79 683 91 HOH HOH . 
K 6 HOH A 80 684 93 HOH HOH . 
K 6 HOH A 81 685 94 HOH HOH . 
K 6 HOH A 82 686 95 HOH HOH . 
K 6 HOH A 83 687 100 HOH HOH . 
K 6 HOH A 84 688 103 HOH HOH . 
K 6 HOH A 85 689 104 HOH HOH . 
K 6 HOH A 86 690 106 HOH HOH . 
K 6 HOH A 87 691 107 HOH HOH . 
K 6 HOH A 88 692 108 HOH HOH . 
K 6 HOH A 89 693 109 HOH HOH . 
K 6 HOH A 90 694 110 HOH HOH . 
K 6 HOH A 91 695 112 HOH HOH . 
K 6 HOH A 92 696 113 HOH HOH . 
K 6 HOH A 93 697 114 HOH HOH . 
K 6 HOH A 94 698 115 HOH HOH . 
K 6 HOH A 95 699 117 HOH HOH . 
K 6 HOH A 96 700 120 HOH HOH . 
K 6 HOH A 97 701 121 HOH HOH . 
K 6 HOH A 98 702 122 HOH HOH . 
K 6 HOH A 99 703 123 HOH HOH . 
K 6 HOH A 100 704 124 HOH HOH . 
K 6 HOH A 101 705 125 HOH HOH . 
K 6 HOH A 102 706 127 HOH HOH . 
K 6 HOH A 103 707 129 HOH HOH . 
K 6 HOH A 104 708 132 HOH HOH . 
K 6 HOH A 105 709 133 HOH HOH . 
K 6 HOH A 106 710 134 HOH HOH . 
K 6 HOH A 107 711 135 HOH HOH . 
K 6 HOH A 108 712 136 HOH HOH . 
K 6 HOH A 109 713 137 HOH HOH . 
K 6 HOH A 110 714 138 HOH HOH . 
K 6 HOH A 111 715 139 HOH HOH . 
K 6 HOH A 112 716 141 HOH HOH . 
K 6 HOH A 113 717 142 HOH HOH . 
K 6 HOH A 114 718 143 HOH HOH . 
K 6 HOH A 115 719 144 HOH HOH . 
K 6 HOH A 116 720 145 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MAN . . . D 3 -31.998 -34.861 -8.102 1 35.1 ? C1 MAN 503 A 1 
HETATM 2 C C2 MAN . . . D 3 -31.324 -33.985 -9.18 1 36.1 ? C2 MAN 503 A 1 
HETATM 3 C C3 MAN . . . D 3 -30.012 -34.646 -9.654 1 36.8 ? C3 MAN 503 A 1 
HETATM 4 C C4 MAN . . . D 3 -29.578 -35.81 -8.769 1 37.01 ? C4 MAN 503 A 1 
HETATM 5 C C5 MAN . . . D 3 -30.695 -36.824 -8.504 1 36.73 ? C5 MAN 503 A 1 
HETATM 6 C C6 MAN . . . D 3 -30.474 -37.483 -7.15 1 37.26 ? C6 MAN 503 A 1 
HETATM 7 O O2 MAN . . . D 3 -31.189 -32.624 -8.765 1 33.66 ? O2 MAN 503 A 1 
HETATM 8 O O3 MAN . . . D 3 -28.924 -33.749 -9.703 1 37.92 ? O3 MAN 503 A 1 
HETATM 9 O O4 MAN . . . D 3 -28.479 -36.455 -9.376 1 37.07 ? O4 MAN 503 A 1 
HETATM 10 O O5 MAN . . . D 3 -31.975 -36.218 -8.514 1 35.34 ? O5 MAN 503 A 1 
HETATM 11 O O6 MAN . . . D 3 -30.119 -38.818 -7.365 1 37.64 ? O6 MAN 503 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           268 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           11 
#