data_2I06 # _model_server_result.job_id IvomszBagIH32rypoO4Bug _model_server_result.datetime_utc '2024-10-18 14:36:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2i06 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1003}' # _entry.id 2I06 # _exptl.entry_id 2I06 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.904 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IODIDE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2I06 _cell.length_a 62.834 _cell.length_b 62.834 _cell.length_c 252.454 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2I06 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order hydrog WATSON-CRICK hydrog1 A N1 DA 3 B DA 312 1_555 B N3 DT 15 C DT 341 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N6 DA 3 B DA 312 1_555 B O4 DT 15 C DT 341 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A N1 DG 4 B DG 313 1_555 B N3 DC 14 C DC 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N2 DG 4 B DG 313 1_555 B O2 DC 14 C DC 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A O6 DG 4 B DG 313 1_555 B N4 DC 14 C DC 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A N3 DT 5 B DT 314 1_555 B N1 DA 13 C DA 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A O4 DT 5 B DT 314 1_555 B N6 DA 13 C DA 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N3 DT 6 B DT 315 1_555 B N1 DA 12 C DA 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A O4 DT 6 B DT 315 1_555 B N6 DA 12 C DA 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N1 DA 7 B DA 316 1_555 B N3 DT 11 C DT 337 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A N6 DA 7 B DA 316 1_555 B O4 DT 11 C DT 337 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N3 DC 8 B DC 317 1_555 B N1 DG 10 C DG 336 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A N4 DC 8 B DC 317 1_555 B O6 DG 10 C DG 336 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A O2 DC 8 B DC 317 1_555 B N2 DG 10 C DG 336 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A N1 DA 9 B DA 318 1_555 B N3 DT 9 C DT 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A N6 DA 9 B DA 318 1_555 B O4 DT 9 C DT 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 A N1 DA 10 B DA 319 1_555 B N3 DT 8 C DT 334 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 A N6 DA 10 B DA 319 1_555 B O4 DT 8 C DT 334 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 A N3 DC 11 B DC 320 1_555 B N1 DG 7 C DG 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 A N4 DC 11 B DC 320 1_555 B O6 DG 7 C DG 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 A O2 DC 11 B DC 320 1_555 B N2 DG 7 C DG 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 A N1 DA 12 B DA 321 1_555 B N3 DT 6 C DT 332 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 A N6 DA 12 B DA 321 1_555 B O4 DT 6 C DT 332 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 A N3 DT 13 B DT 322 1_555 B N1 DA 5 C DA 331 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 A O4 DT 13 B DT 322 1_555 B N6 DA 5 C DA 331 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'I -1' _chem_comp.formula_weight 126.904 _chem_comp.id IOD _chem_comp.mon_nstd_flag . _chem_comp.name 'IODIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2I06 _atom_sites.fract_transf_matrix[1][1] 0.015915 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015915 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003961 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 IOD A 1 1001 1 IOD IOD . E 4 IOD A 1 1002 2 IOD IOD . F 4 IOD A 1 1003 3 IOD IOD . G 5 HOH B 1 30 30 HOH HOH . G 5 HOH B 2 35 35 HOH HOH . G 5 HOH B 3 41 41 HOH HOH . G 5 HOH B 4 50 50 HOH HOH . G 5 HOH B 5 58 58 HOH HOH . H 5 HOH C 1 7 7 HOH HOH . H 5 HOH C 2 15 15 HOH HOH . H 5 HOH C 3 23 23 HOH HOH . H 5 HOH C 4 28 28 HOH HOH . H 5 HOH C 5 32 32 HOH HOH . H 5 HOH C 6 34 34 HOH HOH . H 5 HOH C 7 36 36 HOH HOH . H 5 HOH C 8 42 42 HOH HOH . H 5 HOH C 9 44 44 HOH HOH . I 5 HOH A 1 1004 1 HOH HOH . I 5 HOH A 2 1005 3 HOH HOH . I 5 HOH A 3 1006 4 HOH HOH . I 5 HOH A 4 1007 5 HOH HOH . I 5 HOH A 5 1008 6 HOH HOH . I 5 HOH A 6 1009 8 HOH HOH . I 5 HOH A 7 1010 9 HOH HOH . I 5 HOH A 8 1011 10 HOH HOH . I 5 HOH A 9 1012 11 HOH HOH . I 5 HOH A 10 1013 12 HOH HOH . I 5 HOH A 11 1014 13 HOH HOH . I 5 HOH A 12 1015 14 HOH HOH . I 5 HOH A 13 1016 16 HOH HOH . I 5 HOH A 14 1017 17 HOH HOH . I 5 HOH A 15 1018 18 HOH HOH . I 5 HOH A 16 1019 19 HOH HOH . I 5 HOH A 17 1020 20 HOH HOH . I 5 HOH A 18 1021 21 HOH HOH . I 5 HOH A 19 1022 22 HOH HOH . I 5 HOH A 20 1023 25 HOH HOH . I 5 HOH A 21 1024 26 HOH HOH . I 5 HOH A 22 1025 27 HOH HOH . I 5 HOH A 23 1026 29 HOH HOH . I 5 HOH A 24 1027 31 HOH HOH . I 5 HOH A 25 1028 33 HOH HOH . I 5 HOH A 26 1029 37 HOH HOH . I 5 HOH A 27 1030 38 HOH HOH . I 5 HOH A 28 1031 39 HOH HOH . I 5 HOH A 29 1032 40 HOH HOH . I 5 HOH A 30 1033 43 HOH HOH . I 5 HOH A 31 1034 45 HOH HOH . I 5 HOH A 32 1035 46 HOH HOH . I 5 HOH A 33 1036 47 HOH HOH . I 5 HOH A 34 1037 48 HOH HOH . I 5 HOH A 35 1038 49 HOH HOH . I 5 HOH A 36 1039 51 HOH HOH . I 5 HOH A 37 1040 52 HOH HOH . I 5 HOH A 38 1041 53 HOH HOH . I 5 HOH A 39 1042 54 HOH HOH . I 5 HOH A 40 1043 55 HOH HOH . I 5 HOH A 41 1044 56 HOH HOH . I 5 HOH A 42 1045 57 HOH HOH . I 5 HOH A 43 1046 59 HOH HOH . I 5 HOH A 44 1047 60 HOH HOH . I 5 HOH A 45 1048 61 HOH HOH . I 5 HOH A 46 1049 62 HOH HOH . I 5 HOH A 47 1050 63 HOH HOH . I 5 HOH A 48 1051 64 HOH HOH . I 5 HOH A 49 1052 65 HOH HOH . I 5 HOH A 50 1053 66 HOH HOH . I 5 HOH A 51 1054 67 HOH HOH . I 5 HOH A 52 1055 68 HOH HOH . I 5 HOH A 53 1056 69 HOH HOH . I 5 HOH A 54 1057 70 HOH HOH . I 5 HOH A 55 1058 71 HOH HOH . I 5 HOH A 56 1059 72 HOH HOH . I 5 HOH A 57 1060 73 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol I _atom_site.label_atom_id I _atom_site.label_comp_id IOD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 4 _atom_site.Cartn_x 34.647 _atom_site.Cartn_y 0.789 _atom_site.Cartn_z 62.59 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 88.48 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id I _atom_site.auth_comp_id IOD _atom_site.auth_seq_id 1003 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #