data_2I0D # _model_server_result.job_id r2DMAC4OKFSDHN1kvJFZyg _model_server_result.datetime_utc '2025-03-06 03:36:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2i0d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":503}' # _entry.id 2I0D # _exptl.entry_id 2I0D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2I0D _cell.length_a 50.778 _cell.length_b 58.314 _cell.length_c 61.693 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2I0D _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 F N N ? 2 G N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 353 n n P O2 PO4 sing 354 n n P O3 PO4 sing 355 n n P O4 PO4 sing 356 n n # _atom_sites.entry_id 2I0D _atom_sites.fract_transf_matrix[1][1] 0.019694 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017149 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016209 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 503 503 PO4 PO4 . D 2 PO4 A 1 504 504 PO4 PO4 . E 3 MUT A 1 200 200 MUT MUT . F 2 PO4 B 1 501 501 PO4 PO4 . G 2 PO4 B 1 502 502 PO4 PO4 . H 4 ACT B 1 505 505 ACT ACT . I 5 HOH A 1 505 2 HOH WAT . I 5 HOH A 2 506 3 HOH WAT . I 5 HOH A 3 507 4 HOH WAT . I 5 HOH A 4 508 5 HOH WAT . I 5 HOH A 5 509 6 HOH WAT . I 5 HOH A 6 510 10 HOH WAT . I 5 HOH A 7 511 12 HOH WAT . I 5 HOH A 8 512 14 HOH WAT . I 5 HOH A 9 513 16 HOH WAT . I 5 HOH A 10 514 17 HOH WAT . I 5 HOH A 11 515 20 HOH WAT . I 5 HOH A 12 516 24 HOH WAT . I 5 HOH A 13 517 26 HOH WAT . I 5 HOH A 14 518 27 HOH WAT . I 5 HOH A 15 519 28 HOH WAT . I 5 HOH A 16 520 30 HOH WAT . I 5 HOH A 17 521 33 HOH WAT . I 5 HOH A 18 522 34 HOH WAT . I 5 HOH A 19 523 36 HOH WAT . I 5 HOH A 20 524 38 HOH WAT . I 5 HOH A 21 525 39 HOH WAT . I 5 HOH A 22 526 41 HOH WAT . I 5 HOH A 23 527 42 HOH WAT . I 5 HOH A 24 528 45 HOH WAT . I 5 HOH A 25 529 48 HOH WAT . I 5 HOH A 26 530 55 HOH WAT . I 5 HOH A 27 531 56 HOH WAT . I 5 HOH A 28 532 58 HOH WAT . I 5 HOH A 29 533 61 HOH WAT . I 5 HOH A 30 534 62 HOH WAT . I 5 HOH A 31 535 66 HOH WAT . I 5 HOH A 32 536 67 HOH WAT . I 5 HOH A 33 537 69 HOH WAT . I 5 HOH A 34 538 79 HOH WAT . I 5 HOH A 35 539 80 HOH WAT . I 5 HOH A 36 540 81 HOH WAT . I 5 HOH A 37 541 82 HOH WAT . I 5 HOH A 38 542 83 HOH WAT . I 5 HOH A 39 543 84 HOH WAT . I 5 HOH A 40 544 85 HOH WAT . I 5 HOH A 41 545 86 HOH WAT . I 5 HOH A 42 546 87 HOH WAT . I 5 HOH A 43 547 88 HOH WAT . I 5 HOH A 44 548 89 HOH WAT . I 5 HOH A 45 549 90 HOH WAT . I 5 HOH A 46 550 91 HOH WAT . I 5 HOH A 47 551 92 HOH WAT . I 5 HOH A 48 552 93 HOH WAT . I 5 HOH A 49 553 94 HOH WAT . I 5 HOH A 50 554 95 HOH WAT . I 5 HOH A 51 555 106 HOH WAT . I 5 HOH A 52 556 107 HOH WAT . I 5 HOH A 53 557 109 HOH WAT . I 5 HOH A 54 558 110 HOH WAT . I 5 HOH A 55 559 111 HOH WAT . I 5 HOH A 56 560 112 HOH WAT . I 5 HOH A 57 561 113 HOH WAT . I 5 HOH A 58 562 114 HOH WAT . I 5 HOH A 59 563 115 HOH WAT . I 5 HOH A 60 564 116 HOH WAT . I 5 HOH A 61 565 117 HOH WAT . I 5 HOH A 62 566 118 HOH WAT . I 5 HOH A 63 567 119 HOH WAT . I 5 HOH A 64 568 120 HOH WAT . I 5 HOH A 65 569 124 HOH WAT . I 5 HOH A 66 570 125 HOH WAT . I 5 HOH A 67 571 127 HOH WAT . I 5 HOH A 68 572 128 HOH WAT . I 5 HOH A 69 573 129 HOH WAT . I 5 HOH A 70 574 130 HOH WAT . I 5 HOH A 71 575 131 HOH WAT . I 5 HOH A 72 576 132 HOH WAT . I 5 HOH A 73 577 133 HOH WAT . I 5 HOH A 74 578 134 HOH WAT . I 5 HOH A 75 579 135 HOH WAT . I 5 HOH A 76 580 136 HOH WAT . I 5 HOH A 77 581 137 HOH WAT . I 5 HOH A 78 582 138 HOH WAT . I 5 HOH A 79 583 139 HOH WAT . I 5 HOH A 80 584 140 HOH WAT . I 5 HOH A 81 585 142 HOH WAT . I 5 HOH A 82 586 143 HOH WAT . I 5 HOH A 83 587 144 HOH WAT . I 5 HOH A 84 588 145 HOH WAT . I 5 HOH A 85 589 150 HOH WAT . I 5 HOH A 86 590 153 HOH WAT . I 5 HOH A 87 591 154 HOH WAT . I 5 HOH A 88 592 155 HOH WAT . I 5 HOH A 89 593 156 HOH WAT . J 5 HOH B 1 506 1 HOH WAT . J 5 HOH B 2 507 7 HOH WAT . J 5 HOH B 3 508 8 HOH WAT . J 5 HOH B 4 509 9 HOH WAT . J 5 HOH B 5 510 11 HOH WAT . J 5 HOH B 6 511 13 HOH WAT . J 5 HOH B 7 512 15 HOH WAT . J 5 HOH B 8 513 18 HOH WAT . J 5 HOH B 9 514 19 HOH WAT . J 5 HOH B 10 515 21 HOH WAT . J 5 HOH B 11 516 22 HOH WAT . J 5 HOH B 12 517 23 HOH WAT . J 5 HOH B 13 518 25 HOH WAT . J 5 HOH B 14 519 29 HOH WAT . J 5 HOH B 15 520 31 HOH WAT . J 5 HOH B 16 521 32 HOH WAT . J 5 HOH B 17 522 35 HOH WAT . J 5 HOH B 18 523 37 HOH WAT . J 5 HOH B 19 524 40 HOH WAT . J 5 HOH B 20 525 43 HOH WAT . J 5 HOH B 21 526 44 HOH WAT . J 5 HOH B 22 527 46 HOH WAT . J 5 HOH B 23 528 47 HOH WAT . J 5 HOH B 24 529 49 HOH WAT . J 5 HOH B 25 530 50 HOH WAT . J 5 HOH B 26 531 51 HOH WAT . J 5 HOH B 27 532 52 HOH WAT . J 5 HOH B 28 533 53 HOH WAT . J 5 HOH B 29 534 54 HOH WAT . J 5 HOH B 30 535 57 HOH WAT . J 5 HOH B 31 536 59 HOH WAT . J 5 HOH B 32 537 60 HOH WAT . J 5 HOH B 33 538 63 HOH WAT . J 5 HOH B 34 539 64 HOH WAT . J 5 HOH B 35 540 65 HOH WAT . J 5 HOH B 36 541 68 HOH WAT . J 5 HOH B 37 542 70 HOH WAT . J 5 HOH B 38 543 71 HOH WAT . J 5 HOH B 39 544 72 HOH WAT . J 5 HOH B 40 545 73 HOH WAT . J 5 HOH B 41 546 74 HOH WAT . J 5 HOH B 42 547 75 HOH WAT . J 5 HOH B 43 548 76 HOH WAT . J 5 HOH B 44 549 77 HOH WAT . J 5 HOH B 45 550 78 HOH WAT . J 5 HOH B 46 551 96 HOH WAT . J 5 HOH B 47 552 97 HOH WAT . J 5 HOH B 48 553 98 HOH WAT . J 5 HOH B 49 554 99 HOH WAT . J 5 HOH B 50 555 100 HOH WAT . J 5 HOH B 51 556 101 HOH WAT . J 5 HOH B 52 557 102 HOH WAT . J 5 HOH B 53 558 103 HOH WAT . J 5 HOH B 54 559 104 HOH WAT . J 5 HOH B 55 560 105 HOH WAT . J 5 HOH B 56 561 108 HOH WAT . J 5 HOH B 57 562 121 HOH WAT . J 5 HOH B 58 563 122 HOH WAT . J 5 HOH B 59 564 123 HOH WAT . J 5 HOH B 60 565 141 HOH WAT . J 5 HOH B 61 566 146 HOH WAT . J 5 HOH B 62 567 147 HOH WAT . J 5 HOH B 63 568 148 HOH WAT . J 5 HOH B 64 569 149 HOH WAT . J 5 HOH B 65 570 151 HOH WAT . J 5 HOH B 66 571 152 HOH WAT . J 5 HOH B 67 572 157 HOH WAT . J 5 HOH B 68 573 158 HOH WAT . J 5 HOH B 69 574 159 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . C 2 42.17 38.285 14.711 1 58.91 ? P PO4 503 A 1 HETATM 2 O O1 PO4 . . . C 2 41.931 36.808 14.937 1 54.6 ? O1 PO4 503 A 1 HETATM 3 O O2 PO4 . . . C 2 42.102 39.024 16.028 1 59 ? O2 PO4 503 A 1 HETATM 4 O O3 PO4 . . . C 2 41.143 38.86 13.762 1 58.54 ? O3 PO4 503 A 1 HETATM 5 O O4 PO4 . . . C 2 43.54 38.466 14.106 1 59.53 ? O4 PO4 503 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 353 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #