data_2I0E
#
_model_server_result.job_id            OiXkQkqMIS-0IFqUUbNVzg 
_model_server_result.datetime_utc      '2024-12-26 23:07:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2i0e 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":901}' 
#
_entry.id    2I0E 
#
_exptl.entry_id    2I0E 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              440.537 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            3-{1-[3-(DIMETHYLAMINO)PROPYL]-2-METHYL-1H-INDOL-3-YL}-4-(2-METHYL-1H-INDOL-3-YL)-1H-PYRROLE-2,5-DIONE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2I0E 
_cell.length_a            93.098 
_cell.length_b            131.417 
_cell.length_c            83.801 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2I0E 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA dimeric 2 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
A,C,E 3 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 93.098 131.417 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C LYS 179 A LYS 499 1_555 A N TPO 180 A TPO 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale2 A C TPO 180 A TPO 500 1_555 A N PHE 181 A PHE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale3 A C LEU 320 A LEU 640 1_555 A N TPO 321 A TPO 641 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale4 A C TPO 321 A TPO 641 1_555 A N PRO 322 A PRO 642 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.354 ? 
covale ? covale5 A C PHE 339 A PHE 659 1_555 A N SEP 340 A SEP 660 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale6 A C SEP 340 A SEP 660 1_555 A N PHE 341 A PHE 661 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale7 B C LYS 179 B LYS 499 1_555 B N TPO 180 B TPO 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale8 B C TPO 180 B TPO 500 1_555 B N PHE 181 B PHE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale9 B C PHE 339 B PHE 659 1_555 B N SEP 340 B SEP 660 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale10 B C SEP 340 B SEP 660 1_555 B N PHE 341 B PHE 661 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
#
_chem_comp.formula           'C27 H28 N4 O2' 
_chem_comp.formula_weight    440.537 
_chem_comp.id                PDS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              3-{1-[3-(DIMETHYLAMINO)PROPYL]-2-METHYL-1H-INDOL-3-YL}-4-(2-METHYL-1H-INDOL-3-YL)-1H-PYRROLE-2,5-DIONE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O14 C6 PDS doub 237 n n 
C6 C2 PDS sing 238 n n 
C6 N13 PDS sing 239 n n 
N13 C12 PDS sing 240 n n 
N13 HN13 PDS sing 241 n n 
C12 C5 PDS sing 242 n n 
C12 O20 PDS doub 243 n n 
C2 C1 PDS sing 244 n n 
C2 C5 PDS doub 245 n n 
C5 C11 PDS sing 246 n n 
C11 C18 PDS sing 247 n y 
C11 C19 PDS doub 248 n y 
C18 C24 PDS doub 249 n y 
C18 C23 PDS sing 250 n y 
C24 C29 PDS sing 251 n y 
C24 H24 PDS sing 252 n n 
C29 C31 PDS doub 253 n y 
C29 H29 PDS sing 254 n n 
C31 C28 PDS sing 255 n y 
C31 H31 PDS sing 256 n n 
C28 C23 PDS doub 257 n y 
C28 H28 PDS sing 258 n n 
C23 N25 PDS sing 259 n y 
N25 C19 PDS sing 260 n y 
N25 HN25 PDS sing 261 n n 
C19 C26 PDS sing 262 n n 
C26 H261 PDS sing 263 n n 
C26 H262 PDS sing 264 n n 
C26 H263 PDS sing 265 n n 
C1 C3 PDS sing 266 n y 
C1 C4 PDS doub 267 n y 
C3 C7 PDS doub 268 n y 
C3 C8 PDS sing 269 n y 
C8 C16 PDS doub 270 n y 
C8 H8 PDS sing 271 n n 
C16 C21 PDS sing 272 n y 
C16 H16 PDS sing 273 n n 
C7 C15 PDS sing 274 n y 
C7 N9 PDS sing 275 n y 
C15 C21 PDS doub 276 n y 
C15 H15 PDS sing 277 n n 
C21 H21 PDS sing 278 n n 
N9 C17 PDS sing 279 n n 
N9 C4 PDS sing 280 n y 
C4 C10 PDS sing 281 n n 
C10 H101 PDS sing 282 n n 
C10 H102 PDS sing 283 n n 
C10 H103 PDS sing 284 n n 
C17 C22 PDS sing 285 n n 
C17 H171 PDS sing 286 n n 
C17 H172 PDS sing 287 n n 
C22 C27 PDS sing 288 n n 
C22 H221 PDS sing 289 n n 
C22 H222 PDS sing 290 n n 
C27 N30 PDS sing 291 n n 
C27 H271 PDS sing 292 n n 
C27 H272 PDS sing 293 n n 
N30 C33 PDS sing 294 n n 
N30 C32 PDS sing 295 n n 
C32 H321 PDS sing 296 n n 
C32 H322 PDS sing 297 n n 
C32 H323 PDS sing 298 n n 
C33 H331 PDS sing 299 n n 
C33 H332 PDS sing 300 n n 
C33 H333 PDS sing 301 n n 
#
_atom_sites.entry_id                     2I0E 
_atom_sites.fract_transf_matrix[1][1]    0.010741 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007609 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011933 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 PDS A 1 901 901 PDS PDS . 
D 2 PDS B 1 902 902 PDS PDS . 
E 3 HOH A 1 1 1 HOH HOH . 
E 3 HOH A 2 2 2 HOH HOH . 
E 3 HOH A 3 3 3 HOH HOH . 
E 3 HOH A 4 5 5 HOH HOH . 
E 3 HOH A 5 13 13 HOH HOH . 
E 3 HOH A 6 16 16 HOH HOH . 
E 3 HOH A 7 18 18 HOH HOH . 
E 3 HOH A 8 19 19 HOH HOH . 
E 3 HOH A 9 22 22 HOH HOH . 
E 3 HOH A 10 24 24 HOH HOH . 
E 3 HOH A 11 29 29 HOH HOH . 
E 3 HOH A 12 30 30 HOH HOH . 
E 3 HOH A 13 32 32 HOH HOH . 
E 3 HOH A 14 33 33 HOH HOH . 
E 3 HOH A 15 35 35 HOH HOH . 
E 3 HOH A 16 36 36 HOH HOH . 
E 3 HOH A 17 39 39 HOH HOH . 
E 3 HOH A 18 40 40 HOH HOH . 
E 3 HOH A 19 43 43 HOH HOH . 
E 3 HOH A 20 47 47 HOH HOH . 
E 3 HOH A 21 48 48 HOH HOH . 
E 3 HOH A 22 50 50 HOH HOH . 
E 3 HOH A 23 52 52 HOH HOH . 
E 3 HOH A 24 53 53 HOH HOH . 
E 3 HOH A 25 54 54 HOH HOH . 
E 3 HOH A 26 55 55 HOH HOH . 
E 3 HOH A 27 56 56 HOH HOH . 
E 3 HOH A 28 57 57 HOH HOH . 
E 3 HOH A 29 58 58 HOH HOH . 
E 3 HOH A 30 64 64 HOH HOH . 
E 3 HOH A 31 65 65 HOH HOH . 
E 3 HOH A 32 66 66 HOH HOH . 
E 3 HOH A 33 67 67 HOH HOH . 
E 3 HOH A 34 69 69 HOH HOH . 
E 3 HOH A 35 70 70 HOH HOH . 
E 3 HOH A 36 71 71 HOH HOH . 
E 3 HOH A 37 73 73 HOH HOH . 
E 3 HOH A 38 74 74 HOH HOH . 
E 3 HOH A 39 75 75 HOH HOH . 
E 3 HOH A 40 76 76 HOH HOH . 
E 3 HOH A 41 77 77 HOH HOH . 
E 3 HOH A 42 80 80 HOH HOH . 
E 3 HOH A 43 82 82 HOH HOH . 
E 3 HOH A 44 83 83 HOH HOH . 
E 3 HOH A 45 85 85 HOH HOH . 
E 3 HOH A 46 86 86 HOH HOH . 
E 3 HOH A 47 90 90 HOH HOH . 
E 3 HOH A 48 93 93 HOH HOH . 
E 3 HOH A 49 95 95 HOH HOH . 
E 3 HOH A 50 96 96 HOH HOH . 
E 3 HOH A 51 97 97 HOH HOH . 
E 3 HOH A 52 98 98 HOH HOH . 
E 3 HOH A 53 101 101 HOH HOH . 
E 3 HOH A 54 104 104 HOH HOH . 
E 3 HOH A 55 105 105 HOH HOH . 
E 3 HOH A 56 106 106 HOH HOH . 
E 3 HOH A 57 108 108 HOH HOH . 
E 3 HOH A 58 109 109 HOH HOH . 
E 3 HOH A 59 110 110 HOH HOH . 
E 3 HOH A 60 112 112 HOH HOH . 
E 3 HOH A 61 113 113 HOH HOH . 
E 3 HOH A 62 114 114 HOH HOH . 
E 3 HOH A 63 115 115 HOH HOH . 
F 3 HOH B 1 4 4 HOH HOH . 
F 3 HOH B 2 6 6 HOH HOH . 
F 3 HOH B 3 7 7 HOH HOH . 
F 3 HOH B 4 8 8 HOH HOH . 
F 3 HOH B 5 9 9 HOH HOH . 
F 3 HOH B 6 10 10 HOH HOH . 
F 3 HOH B 7 11 11 HOH HOH . 
F 3 HOH B 8 12 12 HOH HOH . 
F 3 HOH B 9 14 14 HOH HOH . 
F 3 HOH B 10 15 15 HOH HOH . 
F 3 HOH B 11 17 17 HOH HOH . 
F 3 HOH B 12 20 20 HOH HOH . 
F 3 HOH B 13 21 21 HOH HOH . 
F 3 HOH B 14 23 23 HOH HOH . 
F 3 HOH B 15 25 25 HOH HOH . 
F 3 HOH B 16 26 26 HOH HOH . 
F 3 HOH B 17 27 27 HOH HOH . 
F 3 HOH B 18 28 28 HOH HOH . 
F 3 HOH B 19 31 31 HOH HOH . 
F 3 HOH B 20 34 34 HOH HOH . 
F 3 HOH B 21 37 37 HOH HOH . 
F 3 HOH B 22 38 38 HOH HOH . 
F 3 HOH B 23 41 41 HOH HOH . 
F 3 HOH B 24 42 42 HOH HOH . 
F 3 HOH B 25 44 44 HOH HOH . 
F 3 HOH B 26 45 45 HOH HOH . 
F 3 HOH B 27 46 46 HOH HOH . 
F 3 HOH B 28 49 49 HOH HOH . 
F 3 HOH B 29 51 51 HOH HOH . 
F 3 HOH B 30 59 59 HOH HOH . 
F 3 HOH B 31 60 60 HOH HOH . 
F 3 HOH B 32 61 61 HOH HOH . 
F 3 HOH B 33 62 62 HOH HOH . 
F 3 HOH B 34 63 63 HOH HOH . 
F 3 HOH B 35 68 68 HOH HOH . 
F 3 HOH B 36 72 72 HOH HOH . 
F 3 HOH B 37 78 78 HOH HOH . 
F 3 HOH B 38 79 79 HOH HOH . 
F 3 HOH B 39 81 81 HOH HOH . 
F 3 HOH B 40 84 84 HOH HOH . 
F 3 HOH B 41 87 87 HOH HOH . 
F 3 HOH B 42 88 88 HOH HOH . 
F 3 HOH B 43 89 89 HOH HOH . 
F 3 HOH B 44 91 91 HOH HOH . 
F 3 HOH B 45 92 92 HOH HOH . 
F 3 HOH B 46 94 94 HOH HOH . 
F 3 HOH B 47 99 99 HOH HOH . 
F 3 HOH B 48 100 100 HOH HOH . 
F 3 HOH B 49 102 102 HOH HOH . 
F 3 HOH B 50 103 103 HOH HOH . 
F 3 HOH B 51 107 107 HOH HOH . 
F 3 HOH B 52 111 111 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O14 PDS . . . C 2 34 55.532 35.483 1 34.41 ? O14 PDS 901 A 1 
HETATM 2 C C6 PDS . . . C 2 34.952 55.958 36.155 1 33.77 ? C6 PDS 901 A 1 
HETATM 3 N N13 PDS . . . C 2 34.967 56.551 37.469 1 32.99 ? N13 PDS 901 A 1 
HETATM 4 C C12 PDS . . . C 2 36.275 56.939 37.943 1 33.23 ? C12 PDS 901 A 1 
HETATM 5 O O20 PDS . . . C 2 36.571 57.457 38.996 1 34.21 ? O20 PDS 901 A 1 
HETATM 6 C C2 PDS . . . C 2 36.358 55.972 35.827 1 33.57 ? C2 PDS 901 A 1 
HETATM 7 C C5 PDS . . . C 2 37.104 56.562 36.863 1 33.11 ? C5 PDS 901 A 1 
HETATM 8 C C11 PDS . . . C 2 38.631 56.748 36.846 1 33.11 ? C11 PDS 901 A 1 
HETATM 9 C C18 PDS . . . C 2 39.432 57.101 35.702 1 32.95 ? C18 PDS 901 A 1 
HETATM 10 C C24 PDS . . . C 2 39.212 57.396 34.304 1 32.89 ? C24 PDS 901 A 1 
HETATM 11 C C29 PDS . . . C 2 40.301 57.704 33.424 1 32.88 ? C29 PDS 901 A 1 
HETATM 12 C C31 PDS . . . C 2 41.629 57.718 33.932 1 32.87 ? C31 PDS 901 A 1 
HETATM 13 C C28 PDS . . . C 2 41.91 57.425 35.295 1 32.92 ? C28 PDS 901 A 1 
HETATM 14 C C23 PDS . . . C 2 40.824 57.116 36.185 1 33.66 ? C23 PDS 901 A 1 
HETATM 15 N N25 PDS . . . C 2 40.826 56.795 37.515 1 34.3 ? N25 PDS 901 A 1 
HETATM 16 C C19 PDS . . . C 2 39.549 56.576 37.931 1 33.44 ? C19 PDS 901 A 1 
HETATM 17 C C26 PDS . . . C 2 39.315 56.223 39.34 1 33.04 ? C26 PDS 901 A 1 
HETATM 18 C C1 PDS . . . C 2 36.91 55.414 34.504 1 33.15 ? C1 PDS 901 A 1 
HETATM 19 C C3 PDS . . . C 2 36.449 55.697 33.201 1 33.53 ? C3 PDS 901 A 1 
HETATM 20 C C8 PDS . . . C 2 35.412 56.519 32.641 1 33.58 ? C8 PDS 901 A 1 
HETATM 21 C C16 PDS . . . C 2 35.226 56.587 31.209 1 33.53 ? C16 PDS 901 A 1 
HETATM 22 C C7 PDS . . . C 2 37.312 54.94 32.281 1 33.49 ? C7 PDS 901 A 1 
HETATM 23 C C15 PDS . . . C 2 37.131 55.002 30.857 1 33.15 ? C15 PDS 901 A 1 
HETATM 24 C C21 PDS . . . C 2 36.086 55.828 30.334 1 33.42 ? C21 PDS 901 A 1 
HETATM 25 N N9 PDS . . . C 2 38.226 54.241 32.995 1 33.55 ? N9 PDS 901 A 1 
HETATM 26 C C4 PDS . . . C 2 38.003 54.495 34.338 1 33.06 ? C4 PDS 901 A 1 
HETATM 27 C C10 PDS . . . C 2 38.843 53.863 35.349 1 32.81 ? C10 PDS 901 A 1 
HETATM 28 C C17 PDS . . . C 2 39.236 53.368 32.362 1 33.77 ? C17 PDS 901 A 1 
HETATM 29 C C22 PDS . . . C 2 40.58 54.125 32.165 1 35.82 ? C22 PDS 901 A 1 
HETATM 30 C C27 PDS . . . C 2 41.767 53.149 32.074 1 38.19 ? C27 PDS 901 A 1 
HETATM 31 N N30 PDS . . . C 2 43.058 53.583 32.651 1 40.63 ? N30 PDS 901 A 1 
HETATM 32 C C32 PDS . . . C 2 42.941 53.507 34.12 1 41.82 ? C32 PDS 901 A 1 
HETATM 33 C C33 PDS . . . C 2 43.487 54.962 32.311 1 40.46 ? C33 PDS 901 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           327 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           33 
#