data_2I0Q # _model_server_result.job_id dnulwoi_ODuHieQb-QfnKw _model_server_result.datetime_utc '2024-10-18 16:19:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2i0q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":500}' # _entry.id 2I0Q # _exptl.entry_id 2I0Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2I0Q _cell.length_a 93.331 _cell.length_b 93.331 _cell.length_c 423.779 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2I0Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 H N N ? 5 I N N ? 5 J N N ? 5 K N N ? 5 L N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 159 n n C1 C2 EDO sing 160 n n C1 H11 EDO sing 161 n n C1 H12 EDO sing 162 n n O1 HO1 EDO sing 163 n n C2 O2 EDO sing 164 n n C2 H21 EDO sing 165 n n C2 H22 EDO sing 166 n n O2 HO2 EDO sing 167 n n # _atom_sites.entry_id 2I0Q _atom_sites.fract_transf_matrix[1][1] 0.010715 _atom_sites.fract_transf_matrix[1][2] 0.006186 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012372 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00236 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 CL A 1 496 1 CL CL . E 4 CL A 1 497 2 CL CL . F 4 CL A 1 498 3 CL CL . G 4 CL A 1 499 4 CL CL . H 5 EDO A 1 500 1 EDO EDO . I 5 EDO A 1 501 2 EDO EDO . J 5 EDO A 1 502 3 EDO EDO . K 5 EDO A 1 503 5 EDO EDO . L 5 EDO B 1 386 4 EDO EDO . M 6 HOH D 1 128 128 HOH HOH . M 6 HOH D 2 157 157 HOH HOH . M 6 HOH D 3 173 173 HOH HOH . M 6 HOH D 4 232 232 HOH HOH . M 6 HOH D 5 306 306 HOH HOH . M 6 HOH D 6 364 364 HOH HOH . M 6 HOH D 7 367 367 HOH HOH . M 6 HOH D 8 391 391 HOH HOH . M 6 HOH D 9 398 398 HOH HOH . M 6 HOH D 10 409 409 HOH HOH . M 6 HOH D 11 420 420 HOH HOH . M 6 HOH D 12 430 430 HOH HOH . M 6 HOH D 13 443 443 HOH HOH . M 6 HOH D 14 456 456 HOH HOH . M 6 HOH D 15 471 471 HOH HOH . M 6 HOH D 16 529 529 HOH HOH . M 6 HOH D 17 547 547 HOH HOH . M 6 HOH D 18 624 624 HOH HOH . M 6 HOH D 19 664 664 HOH HOH . N 6 HOH A 1 504 101 HOH HOH . N 6 HOH A 2 505 105 HOH HOH . N 6 HOH A 3 506 107 HOH HOH . N 6 HOH A 4 507 108 HOH HOH . N 6 HOH A 5 508 110 HOH HOH . N 6 HOH A 6 509 113 HOH HOH . N 6 HOH A 7 510 114 HOH HOH . N 6 HOH A 8 511 115 HOH HOH . N 6 HOH A 9 512 116 HOH HOH . N 6 HOH A 10 513 117 HOH HOH . N 6 HOH A 11 514 119 HOH HOH . N 6 HOH A 12 515 120 HOH HOH . N 6 HOH A 13 516 121 HOH HOH . N 6 HOH A 14 517 122 HOH HOH . N 6 HOH A 15 518 123 HOH HOH . N 6 HOH A 16 519 125 HOH HOH . N 6 HOH A 17 520 126 HOH HOH . N 6 HOH A 18 521 127 HOH HOH . N 6 HOH A 19 522 129 HOH HOH . N 6 HOH A 20 523 130 HOH HOH . N 6 HOH A 21 524 132 HOH HOH . N 6 HOH A 22 525 133 HOH HOH . N 6 HOH A 23 526 134 HOH HOH . N 6 HOH A 24 527 135 HOH HOH . N 6 HOH A 25 528 136 HOH HOH . N 6 HOH A 26 529 137 HOH HOH . N 6 HOH A 27 530 138 HOH HOH . N 6 HOH A 28 531 139 HOH HOH . N 6 HOH A 29 532 141 HOH HOH . N 6 HOH A 30 533 144 HOH HOH . N 6 HOH A 31 534 145 HOH HOH . N 6 HOH A 32 535 147 HOH HOH . N 6 HOH A 33 536 148 HOH HOH . N 6 HOH A 34 537 149 HOH HOH . N 6 HOH A 35 538 150 HOH HOH . N 6 HOH A 36 539 151 HOH HOH . N 6 HOH A 37 540 152 HOH HOH . N 6 HOH A 38 541 153 HOH HOH . N 6 HOH A 39 542 154 HOH HOH . N 6 HOH A 40 543 156 HOH HOH . N 6 HOH A 41 544 158 HOH HOH . N 6 HOH A 42 545 159 HOH HOH . N 6 HOH A 43 546 160 HOH HOH . N 6 HOH A 44 547 161 HOH HOH . N 6 HOH A 45 548 162 HOH HOH . N 6 HOH A 46 549 163 HOH HOH . N 6 HOH A 47 550 164 HOH HOH . N 6 HOH A 48 551 165 HOH HOH . N 6 HOH A 49 552 166 HOH HOH . N 6 HOH A 50 553 167 HOH HOH . N 6 HOH A 51 554 168 HOH HOH . N 6 HOH A 52 555 169 HOH HOH . N 6 HOH A 53 556 170 HOH HOH . N 6 HOH A 54 557 172 HOH HOH . N 6 HOH A 55 558 174 HOH HOH . N 6 HOH A 56 559 175 HOH HOH . N 6 HOH A 57 560 177 HOH HOH . N 6 HOH A 58 561 178 HOH HOH . N 6 HOH A 59 562 181 HOH HOH . N 6 HOH A 60 563 182 HOH HOH . N 6 HOH A 61 564 183 HOH HOH . N 6 HOH A 62 565 184 HOH HOH . N 6 HOH A 63 566 185 HOH HOH . N 6 HOH A 64 567 186 HOH HOH . N 6 HOH A 65 568 187 HOH HOH . N 6 HOH A 66 569 188 HOH HOH . N 6 HOH A 67 570 189 HOH HOH . N 6 HOH A 68 571 191 HOH HOH . N 6 HOH A 69 572 192 HOH HOH . N 6 HOH A 70 573 193 HOH HOH . N 6 HOH A 71 574 194 HOH HOH . N 6 HOH A 72 575 197 HOH HOH . N 6 HOH A 73 576 199 HOH HOH . N 6 HOH A 74 577 202 HOH HOH . N 6 HOH A 75 578 205 HOH HOH . N 6 HOH A 76 579 207 HOH HOH . N 6 HOH A 77 580 208 HOH HOH . N 6 HOH A 78 581 209 HOH HOH . N 6 HOH A 79 582 211 HOH HOH . N 6 HOH A 80 583 213 HOH HOH . N 6 HOH A 81 584 216 HOH HOH . N 6 HOH A 82 585 218 HOH HOH . N 6 HOH A 83 586 219 HOH HOH . N 6 HOH A 84 587 223 HOH HOH . N 6 HOH A 85 588 224 HOH HOH . N 6 HOH A 86 589 225 HOH HOH . N 6 HOH A 87 590 226 HOH HOH . N 6 HOH A 88 591 228 HOH HOH . N 6 HOH A 89 592 229 HOH HOH . N 6 HOH A 90 593 230 HOH HOH . N 6 HOH A 91 594 231 HOH HOH . N 6 HOH A 92 595 233 HOH HOH . N 6 HOH A 93 596 234 HOH HOH . N 6 HOH A 94 597 235 HOH HOH . N 6 HOH A 95 598 236 HOH HOH . N 6 HOH A 96 599 238 HOH HOH . N 6 HOH A 97 600 239 HOH HOH . N 6 HOH A 98 601 245 HOH HOH . N 6 HOH A 99 602 247 HOH HOH . N 6 HOH A 100 603 249 HOH HOH . N 6 HOH A 101 604 250 HOH HOH . N 6 HOH A 102 605 251 HOH HOH . N 6 HOH A 103 606 253 HOH HOH . N 6 HOH A 104 607 255 HOH HOH . N 6 HOH A 105 608 259 HOH HOH . N 6 HOH A 106 609 260 HOH HOH . N 6 HOH A 107 610 265 HOH HOH . N 6 HOH A 108 611 266 HOH HOH . N 6 HOH A 109 612 269 HOH HOH . N 6 HOH A 110 613 270 HOH HOH . N 6 HOH A 111 614 274 HOH HOH . N 6 HOH A 112 615 277 HOH HOH . N 6 HOH A 113 616 278 HOH HOH . N 6 HOH A 114 617 279 HOH HOH . N 6 HOH A 115 618 281 HOH HOH . N 6 HOH A 116 619 282 HOH HOH . N 6 HOH A 117 620 283 HOH HOH . N 6 HOH A 118 621 284 HOH HOH . N 6 HOH A 119 622 287 HOH HOH . N 6 HOH A 120 623 292 HOH HOH . N 6 HOH A 121 624 295 HOH HOH . N 6 HOH A 122 625 296 HOH HOH . N 6 HOH A 123 626 298 HOH HOH . N 6 HOH A 124 627 302 HOH HOH . N 6 HOH A 125 628 305 HOH HOH . N 6 HOH A 126 629 307 HOH HOH . N 6 HOH A 127 630 313 HOH HOH . N 6 HOH A 128 631 315 HOH HOH . N 6 HOH A 129 632 316 HOH HOH . N 6 HOH A 130 633 317 HOH HOH . N 6 HOH A 131 634 318 HOH HOH . N 6 HOH A 132 635 319 HOH HOH . N 6 HOH A 133 636 321 HOH HOH . N 6 HOH A 134 637 322 HOH HOH . N 6 HOH A 135 638 323 HOH HOH . N 6 HOH A 136 639 326 HOH HOH . N 6 HOH A 137 640 327 HOH HOH . N 6 HOH A 138 641 328 HOH HOH . N 6 HOH A 139 642 329 HOH HOH . N 6 HOH A 140 643 330 HOH HOH . N 6 HOH A 141 644 331 HOH HOH . N 6 HOH A 142 645 332 HOH HOH . N 6 HOH A 143 646 337 HOH HOH . N 6 HOH A 144 647 338 HOH HOH . N 6 HOH A 145 648 341 HOH HOH . N 6 HOH A 146 649 343 HOH HOH . N 6 HOH A 147 650 344 HOH HOH . N 6 HOH A 148 651 345 HOH HOH . N 6 HOH A 149 652 346 HOH HOH . N 6 HOH A 150 653 348 HOH HOH . N 6 HOH A 151 654 350 HOH HOH . N 6 HOH A 152 655 351 HOH HOH . N 6 HOH A 153 656 352 HOH HOH . N 6 HOH A 154 657 353 HOH HOH . N 6 HOH A 155 658 355 HOH HOH . N 6 HOH A 156 659 357 HOH HOH . N 6 HOH A 157 660 358 HOH HOH . N 6 HOH A 158 661 363 HOH HOH . N 6 HOH A 159 662 369 HOH HOH . N 6 HOH A 160 663 372 HOH HOH . N 6 HOH A 161 664 373 HOH HOH . N 6 HOH A 162 665 374 HOH HOH . N 6 HOH A 163 666 375 HOH HOH . N 6 HOH A 164 667 376 HOH HOH . N 6 HOH A 165 668 377 HOH HOH . N 6 HOH A 166 669 378 HOH HOH . N 6 HOH A 167 670 379 HOH HOH . N 6 HOH A 168 671 381 HOH HOH . N 6 HOH A 169 672 387 HOH HOH . N 6 HOH A 170 673 388 HOH HOH . N 6 HOH A 171 674 394 HOH HOH . N 6 HOH A 172 675 402 HOH HOH . N 6 HOH A 173 676 405 HOH HOH . N 6 HOH A 174 677 406 HOH HOH . N 6 HOH A 175 678 415 HOH HOH . N 6 HOH A 176 679 416 HOH HOH . N 6 HOH A 177 680 424 HOH HOH . N 6 HOH A 178 681 432 HOH HOH . N 6 HOH A 179 682 433 HOH HOH . N 6 HOH A 180 683 434 HOH HOH . N 6 HOH A 181 684 437 HOH HOH . N 6 HOH A 182 685 439 HOH HOH . N 6 HOH A 183 686 440 HOH HOH . N 6 HOH A 184 687 442 HOH HOH . N 6 HOH A 185 688 447 HOH HOH . N 6 HOH A 186 689 463 HOH HOH . N 6 HOH A 187 690 465 HOH HOH . N 6 HOH A 188 691 470 HOH HOH . N 6 HOH A 189 692 472 HOH HOH . N 6 HOH A 190 693 473 HOH HOH . N 6 HOH A 191 694 476 HOH HOH . N 6 HOH A 192 695 482 HOH HOH . N 6 HOH A 193 696 483 HOH HOH . N 6 HOH A 194 697 488 HOH HOH . N 6 HOH A 195 698 489 HOH HOH . N 6 HOH A 196 699 490 HOH HOH . N 6 HOH A 197 700 495 HOH HOH . N 6 HOH A 198 701 497 HOH HOH . N 6 HOH A 199 702 502 HOH HOH . N 6 HOH A 200 703 504 HOH HOH . N 6 HOH A 201 704 506 HOH HOH . N 6 HOH A 202 705 508 HOH HOH . N 6 HOH A 203 706 513 HOH HOH . N 6 HOH A 204 707 526 HOH HOH . N 6 HOH A 205 708 528 HOH HOH . N 6 HOH A 206 709 535 HOH HOH . N 6 HOH A 207 710 538 HOH HOH . N 6 HOH A 208 711 539 HOH HOH . N 6 HOH A 209 712 540 HOH HOH . N 6 HOH A 210 713 541 HOH HOH . N 6 HOH A 211 714 545 HOH HOH . N 6 HOH A 212 715 549 HOH HOH . N 6 HOH A 213 716 559 HOH HOH . N 6 HOH A 214 717 560 HOH HOH . N 6 HOH A 215 718 563 HOH HOH . N 6 HOH A 216 719 566 HOH HOH . N 6 HOH A 217 720 568 HOH HOH . N 6 HOH A 218 721 569 HOH HOH . N 6 HOH A 219 722 570 HOH HOH . N 6 HOH A 220 723 572 HOH HOH . N 6 HOH A 221 724 578 HOH HOH . N 6 HOH A 222 725 581 HOH HOH . N 6 HOH A 223 726 584 HOH HOH . N 6 HOH A 224 727 586 HOH HOH . N 6 HOH A 225 728 592 HOH HOH . N 6 HOH A 226 729 595 HOH HOH . N 6 HOH A 227 730 599 HOH HOH . N 6 HOH A 228 731 601 HOH HOH . N 6 HOH A 229 732 602 HOH HOH . N 6 HOH A 230 733 611 HOH HOH . N 6 HOH A 231 734 629 HOH HOH . N 6 HOH A 232 735 634 HOH HOH . N 6 HOH A 233 736 641 HOH HOH . N 6 HOH A 234 737 643 HOH HOH . N 6 HOH A 235 738 651 HOH HOH . N 6 HOH A 236 739 652 HOH HOH . N 6 HOH A 237 740 662 HOH HOH . N 6 HOH A 238 741 668 HOH HOH . N 6 HOH A 239 742 674 HOH HOH . N 6 HOH A 240 743 689 HOH HOH . N 6 HOH A 241 744 690 HOH HOH . O 6 HOH B 1 387 112 HOH HOH . O 6 HOH B 2 388 124 HOH HOH . O 6 HOH B 3 389 131 HOH HOH . O 6 HOH B 4 390 140 HOH HOH . O 6 HOH B 5 391 143 HOH HOH . O 6 HOH B 6 392 171 HOH HOH . O 6 HOH B 7 393 176 HOH HOH . O 6 HOH B 8 394 210 HOH HOH . O 6 HOH B 9 395 215 HOH HOH . O 6 HOH B 10 396 220 HOH HOH . O 6 HOH B 11 397 222 HOH HOH . O 6 HOH B 12 398 237 HOH HOH . O 6 HOH B 13 399 244 HOH HOH . O 6 HOH B 14 400 273 HOH HOH . O 6 HOH B 15 401 289 HOH HOH . O 6 HOH B 16 402 299 HOH HOH . O 6 HOH B 17 403 309 HOH HOH . O 6 HOH B 18 404 312 HOH HOH . O 6 HOH B 19 405 325 HOH HOH . O 6 HOH B 20 406 339 HOH HOH . O 6 HOH B 21 407 356 HOH HOH . O 6 HOH B 22 408 360 HOH HOH . O 6 HOH B 23 409 370 HOH HOH . O 6 HOH B 24 410 371 HOH HOH . O 6 HOH B 25 411 386 HOH HOH . O 6 HOH B 26 412 390 HOH HOH . O 6 HOH B 27 413 403 HOH HOH . O 6 HOH B 28 414 404 HOH HOH . O 6 HOH B 29 415 407 HOH HOH . O 6 HOH B 30 416 417 HOH HOH . O 6 HOH B 31 417 419 HOH HOH . O 6 HOH B 32 418 426 HOH HOH . O 6 HOH B 33 419 448 HOH HOH . O 6 HOH B 34 420 455 HOH HOH . O 6 HOH B 35 421 459 HOH HOH . O 6 HOH B 36 422 466 HOH HOH . O 6 HOH B 37 423 511 HOH HOH . O 6 HOH B 38 424 514 HOH HOH . O 6 HOH B 39 425 525 HOH HOH . O 6 HOH B 40 426 537 HOH HOH . O 6 HOH B 41 427 567 HOH HOH . O 6 HOH B 42 428 571 HOH HOH . O 6 HOH B 43 429 588 HOH HOH . O 6 HOH B 44 430 597 HOH HOH . O 6 HOH B 45 431 628 HOH HOH . O 6 HOH B 46 432 698 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . H 5 3.661 34.98 51.223 1 32.34 ? C1 EDO 500 A 1 HETATM 2 O O1 EDO . . . H 5 4.288 33.717 51.003 1 35.07 ? O1 EDO 500 A 1 HETATM 3 C C2 EDO . . . H 5 3.966 36.073 50.205 1 34.67 ? C2 EDO 500 A 1 HETATM 4 O O2 EDO . . . H 5 3.49 35.803 48.881 1 33.79 ? O2 EDO 500 A 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #