data_2I0Y # _model_server_result.job_id RDFCO6JMDUNrDdA3H_BC3A _model_server_result.datetime_utc '2024-11-22 06:28:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2i0y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1000}' # _entry.id 2I0Y # _exptl.entry_id 2I0Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 339.388 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '5-CYANO-FURAN-2-CARBOXYLIC ACID [5-HYDROXYMETHYL-2-(4-METHYL-PIPERIDIN-1-YL)-PHENYL]-AMIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2I0Y _cell.length_a 81.07 _cell.length_b 81.07 _cell.length_c 144.67 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2I0Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H21 N3 O3' _chem_comp.formula_weight 339.388 _chem_comp.id 5CN _chem_comp.mon_nstd_flag . _chem_comp.name '5-CYANO-FURAN-2-CARBOXYLIC ACID [5-HYDROXYMETHYL-2-(4-METHYL-PIPERIDIN-1-YL)-PHENYL]-AMIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N1 5CN sing 1 n n C1 C2 5CN doub 2 n y C1 C6 5CN sing 3 n y C2 C3 5CN sing 4 n y C2 H2 5CN sing 5 n n C3 C4 5CN doub 6 n y C3 H3 5CN sing 7 n n C7 C11 5CN sing 8 n n C7 C8 5CN sing 9 n n C7 H71 5CN sing 10 n n C7 H72 5CN sing 11 n n C8 N1 5CN sing 12 n n C8 H81 5CN sing 13 n n C8 H82 5CN sing 14 n n C9 C10 5CN sing 15 n n C9 N1 5CN sing 16 n n C9 H91 5CN sing 17 n n C9 H92 5CN sing 18 n n C10 C11 5CN sing 19 n n C10 H101 5CN sing 20 n n C10 H102 5CN sing 21 n n C11 C12 5CN sing 22 n n C11 H11 5CN sing 23 n n C12 H121 5CN sing 24 n n C12 H122 5CN sing 25 n n C12 H123 5CN sing 26 n n C13 C4 5CN sing 27 n n C13 O1 5CN sing 28 n n C13 H131 5CN sing 29 n n C13 H132 5CN sing 30 n n C14 C15 5CN sing 31 n n C14 N2 5CN sing 32 n n C14 O2 5CN doub 33 n n C15 O3 5CN sing 34 n y C15 C16 5CN doub 35 n y C16 C17 5CN sing 36 n y C16 H16 5CN sing 37 n n C19 N3 5CN trip 38 n n C19 C18 5CN sing 39 n n C4 C5 5CN sing 40 n y C5 C6 5CN doub 41 n y C5 H5 5CN sing 42 n n C6 N2 5CN sing 43 n n O1 HO1 5CN sing 44 n n N2 HN2 5CN sing 45 n n C17 C18 5CN doub 46 n y C17 H17 5CN sing 47 n n C18 O3 5CN sing 48 n y # _atom_sites.entry_id 2I0Y _atom_sites.fract_transf_matrix[1][1] 0.012335 _atom_sites.fract_transf_matrix[1][2] 0.007122 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014243 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006912 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5CN A 1 1000 1000 5CN 5CN . C 3 HOH A 1 1001 1 HOH HOH . C 3 HOH A 2 1002 2 HOH HOH . C 3 HOH A 3 1003 3 HOH HOH . C 3 HOH A 4 1004 4 HOH HOH . C 3 HOH A 5 1005 5 HOH HOH . C 3 HOH A 6 1006 6 HOH HOH . C 3 HOH A 7 1007 7 HOH HOH . C 3 HOH A 8 1008 8 HOH HOH . C 3 HOH A 9 1009 9 HOH HOH . C 3 HOH A 10 1010 10 HOH HOH . C 3 HOH A 11 1011 11 HOH HOH . C 3 HOH A 12 1012 12 HOH HOH . C 3 HOH A 13 1013 13 HOH HOH . C 3 HOH A 14 1014 14 HOH HOH . C 3 HOH A 15 1015 15 HOH HOH . C 3 HOH A 16 1016 16 HOH HOH . C 3 HOH A 17 1017 17 HOH HOH . C 3 HOH A 18 1018 18 HOH HOH . C 3 HOH A 19 1019 19 HOH HOH . C 3 HOH A 20 1020 20 HOH HOH . C 3 HOH A 21 1021 21 HOH HOH . C 3 HOH A 22 1022 22 HOH HOH . C 3 HOH A 23 1023 23 HOH HOH . C 3 HOH A 24 1024 24 HOH HOH . C 3 HOH A 25 1025 25 HOH HOH . C 3 HOH A 26 1026 26 HOH HOH . C 3 HOH A 27 1027 27 HOH HOH . C 3 HOH A 28 1028 28 HOH HOH . C 3 HOH A 29 1029 29 HOH HOH . C 3 HOH A 30 1030 30 HOH HOH . C 3 HOH A 31 1031 31 HOH HOH . C 3 HOH A 32 1032 32 HOH HOH . C 3 HOH A 33 1033 33 HOH HOH . C 3 HOH A 34 1034 34 HOH HOH . C 3 HOH A 35 1035 35 HOH HOH . C 3 HOH A 36 1036 36 HOH HOH . C 3 HOH A 37 1037 37 HOH HOH . C 3 HOH A 38 1038 38 HOH HOH . C 3 HOH A 39 1039 39 HOH HOH . C 3 HOH A 40 1040 40 HOH HOH . C 3 HOH A 41 1041 41 HOH HOH . C 3 HOH A 42 1042 42 HOH HOH . C 3 HOH A 43 1043 43 HOH HOH . C 3 HOH A 44 1044 44 HOH HOH . C 3 HOH A 45 1045 45 HOH HOH . C 3 HOH A 46 1046 46 HOH HOH . C 3 HOH A 47 1047 47 HOH HOH . C 3 HOH A 48 1048 48 HOH HOH . C 3 HOH A 49 1049 49 HOH HOH . C 3 HOH A 50 1050 50 HOH HOH . C 3 HOH A 51 1051 51 HOH HOH . C 3 HOH A 52 1052 52 HOH HOH . C 3 HOH A 53 1053 53 HOH HOH . C 3 HOH A 54 1054 54 HOH HOH . C 3 HOH A 55 1055 55 HOH HOH . C 3 HOH A 56 1056 56 HOH HOH . C 3 HOH A 57 1057 57 HOH HOH . C 3 HOH A 58 1058 58 HOH HOH . C 3 HOH A 59 1059 59 HOH HOH . C 3 HOH A 60 1060 60 HOH HOH . C 3 HOH A 61 1061 61 HOH HOH . C 3 HOH A 62 1062 62 HOH HOH . C 3 HOH A 63 1063 63 HOH HOH . C 3 HOH A 64 1064 64 HOH HOH . C 3 HOH A 65 1065 65 HOH HOH . C 3 HOH A 66 1066 66 HOH HOH . C 3 HOH A 67 1067 67 HOH HOH . C 3 HOH A 68 1068 68 HOH HOH . C 3 HOH A 69 1069 69 HOH HOH . C 3 HOH A 70 1070 70 HOH HOH . C 3 HOH A 71 1071 71 HOH HOH . C 3 HOH A 72 1072 72 HOH HOH . C 3 HOH A 73 1073 73 HOH HOH . C 3 HOH A 74 1074 74 HOH HOH . C 3 HOH A 75 1075 75 HOH HOH . C 3 HOH A 76 1076 76 HOH HOH . C 3 HOH A 77 1077 77 HOH HOH . C 3 HOH A 78 1078 78 HOH HOH . C 3 HOH A 79 1079 79 HOH HOH . C 3 HOH A 80 1080 80 HOH HOH . C 3 HOH A 81 1081 81 HOH HOH . C 3 HOH A 82 1082 82 HOH HOH . C 3 HOH A 83 1083 83 HOH HOH . C 3 HOH A 84 1084 84 HOH HOH . C 3 HOH A 85 1085 85 HOH HOH . C 3 HOH A 86 1086 86 HOH HOH . C 3 HOH A 87 1087 87 HOH HOH . C 3 HOH A 88 1088 88 HOH HOH . C 3 HOH A 89 1089 89 HOH HOH . C 3 HOH A 90 1090 90 HOH HOH . C 3 HOH A 91 1091 91 HOH HOH . C 3 HOH A 92 1092 92 HOH HOH . C 3 HOH A 93 1093 93 HOH HOH . C 3 HOH A 94 1094 94 HOH HOH . C 3 HOH A 95 1095 95 HOH HOH . C 3 HOH A 96 1096 96 HOH HOH . C 3 HOH A 97 1097 97 HOH HOH . C 3 HOH A 98 1098 98 HOH HOH . C 3 HOH A 99 1099 99 HOH HOH . C 3 HOH A 100 1100 100 HOH HOH . C 3 HOH A 101 1101 101 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 5CN . . . B 2 4.821 29.492 6.694 1 31.23 ? C1 5CN 1000 A 1 HETATM 2 C C2 5CN . . . B 2 4.066 30.667 7.019 1 33.12 ? C2 5CN 1000 A 1 HETATM 3 C C3 5CN . . . B 2 4.01 31.171 8.345 1 32.6 ? C3 5CN 1000 A 1 HETATM 4 C C7 5CN . . . B 2 6.308 28.52 3.306 1 29.24 ? C7 5CN 1000 A 1 HETATM 5 C C8 5CN . . . B 2 6.2 29.3 4.626 1 30.51 ? C8 5CN 1000 A 1 HETATM 6 C C9 5CN . . . B 2 3.62 28.77 4.602 1 31.21 ? C9 5CN 1000 A 1 HETATM 7 C C10 5CN . . . B 2 3.857 28.041 3.26 1 30.61 ? C10 5CN 1000 A 1 HETATM 8 C C11 5CN . . . B 2 5.038 28.628 2.468 1 30.65 ? C11 5CN 1000 A 1 HETATM 9 C C12 5CN . . . B 2 5.224 27.874 1.154 1 27.25 ? C12 5CN 1000 A 1 HETATM 10 C C13 5CN . . . B 2 4.658 31.047 10.801 1 34.53 ? C13 5CN 1000 A 1 HETATM 11 C C14 5CN . . . B 2 7.069 26.794 8.131 1 28.83 ? C14 5CN 1000 A 1 HETATM 12 C C15 5CN . . . B 2 7.448 25.614 7.357 1 26.69 ? C15 5CN 1000 A 1 HETATM 13 C C16 5CN . . . B 2 8.285 24.552 7.649 1 26.9 ? C16 5CN 1000 A 1 HETATM 14 C C19 5CN . . . B 2 7.01 23.9 4.3 1 27.64 ? C19 5CN 1000 A 1 HETATM 15 C C4 5CN . . . B 2 4.712 30.516 9.396 1 32.09 ? C4 5CN 1000 A 1 HETATM 16 C C5 5CN . . . B 2 5.468 29.342 9.098 1 31.7 ? C5 5CN 1000 A 1 HETATM 17 C C6 5CN . . . B 2 5.53 28.816 7.763 1 30.03 ? C6 5CN 1000 A 1 HETATM 18 N N1 5CN . . . B 2 4.89 29.102 5.331 1 32.34 ? N1 5CN 1000 A 1 HETATM 19 O O1 5CN . . . B 2 3.393 30.696 11.364 1 38.76 ? O1 5CN 1000 A 1 HETATM 20 N N2 5CN . . . B 2 6.197 27.613 7.43 1 28.17 ? N2 5CN 1000 A 1 HETATM 21 O O2 5CN . . . B 2 7.478 26.985 9.28 1 30.93 ? O2 5CN 1000 A 1 HETATM 22 C C17 5CN . . . B 2 8.266 23.688 6.517 1 28.39 ? C17 5CN 1000 A 1 HETATM 23 C C18 5CN . . . B 2 7.418 24.279 5.603 1 27.08 ? C18 5CN 1000 A 1 HETATM 24 O O3 5CN . . . B 2 6.918 25.44 6.094 1 27.79 ? O3 5CN 1000 A 1 HETATM 25 N N3 5CN . . . B 2 6.683 23.601 3.228 1 29.04 ? N3 5CN 1000 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 25 #