data_2I10 # _model_server_result.job_id QrQeL2MM_YCX99UNdgPBjg _model_server_result.datetime_utc '2025-03-05 03:10:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2i10 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 2I10 # _exptl.entry_id 2I10 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2I10 _cell.length_a 44.709 _cell.length_b 53.554 _cell.length_c 178.946 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2I10 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 68 A CYS 66 1_555 A SG CYS 107 A CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 B SG CYS 68 B CYS 66 1_555 B SG CYS 107 B CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? covale ? covale1 A C ALA 20 A ALA 18 1_555 A N MSE 21 A MSE 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 A C MSE 21 A MSE 19 1_555 A N GLU 22 A GLU 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale3 A C TYR 66 A TYR 64 1_555 A N MSE 67 A MSE 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale4 A C MSE 67 A MSE 65 1_555 A N CYS 68 A CYS 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale5 A C ALA 77 A ALA 75 1_555 A N MSE 78 A MSE 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale6 A C MSE 78 A MSE 76 1_555 A N VAL 79 A VAL 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale7 A C CYS 107 A CYS 105 1_555 A N MSE 108 A MSE 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale8 A C MSE 108 A MSE 106 1_555 A N THR 109 A THR 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale9 A C GLN 133 A GLN 131 1_555 A N MSE 134 A MSE 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale10 A C MSE 134 A MSE 132 1_555 A N ARG 135 A ARG 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale11 A C VAL 164 A VAL 162 1_555 A N MSE 165 A MSE 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale12 A C MSE 165 A MSE 163 1_555 A N ALA 166 A ALA 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale13 B C ALA 20 B ALA 18 1_555 B N MSE 21 B MSE 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale14 B C MSE 21 B MSE 19 1_555 B N GLU 22 B GLU 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale15 B C TYR 66 B TYR 64 1_555 B N MSE 67 B MSE 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale16 B C MSE 67 B MSE 65 1_555 B N CYS 68 B CYS 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? covale ? covale17 B C ALA 77 B ALA 75 1_555 B N MSE 78 B MSE 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale18 B C MSE 78 B MSE 76 1_555 B N VAL 79 B VAL 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? covale ? covale19 B C CYS 107 B CYS 105 1_555 B N MSE 108 B MSE 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.312 ? covale ? covale20 B C MSE 108 B MSE 106 1_555 B N THR 109 B THR 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.31 ? covale ? covale21 B C GLN 133 B GLN 131 1_555 B N MSE 134 B MSE 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale22 B C MSE 134 B MSE 132 1_555 B N ARG 135 B ARG 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale23 B C VAL 164 B VAL 162 1_555 B N MSE 165 B MSE 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale24 B C MSE 165 B MSE 163 1_555 B N ALA 166 B ALA 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 252 n n C1 C2 PGE sing 253 n n C1 H1 PGE sing 254 n n C1 H12 PGE sing 255 n n O1 HO1 PGE sing 256 n n C2 O2 PGE sing 257 n n C2 H2 PGE sing 258 n n C2 H22 PGE sing 259 n n O2 C3 PGE sing 260 n n C3 C4 PGE sing 261 n n C3 H3 PGE sing 262 n n C3 H32 PGE sing 263 n n C4 O3 PGE sing 264 n n C4 H4 PGE sing 265 n n C4 H42 PGE sing 266 n n O4 C6 PGE sing 267 n n O4 HO4 PGE sing 268 n n C6 C5 PGE sing 269 n n C6 H6 PGE sing 270 n n C6 H62 PGE sing 271 n n C5 O3 PGE sing 272 n n C5 H5 PGE sing 273 n n C5 H52 PGE sing 274 n n # _atom_sites.entry_id 2I10 _atom_sites.fract_transf_matrix[1][1] 0.022367 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018673 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005588 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NPO B 1 201 201 NPO NPO . D 3 PGE B 1 202 202 PGE PGE . E 4 HOH A 1 201 8 HOH HOH . E 4 HOH A 2 202 11 HOH HOH . E 4 HOH A 3 203 12 HOH HOH . E 4 HOH A 4 204 22 HOH HOH . E 4 HOH A 5 205 32 HOH HOH . E 4 HOH A 6 206 36 HOH HOH . E 4 HOH A 7 207 54 HOH HOH . E 4 HOH A 8 208 56 HOH HOH . E 4 HOH A 9 209 59 HOH HOH . E 4 HOH A 10 210 62 HOH HOH . E 4 HOH A 11 211 68 HOH HOH . E 4 HOH A 12 212 76 HOH HOH . E 4 HOH A 13 213 79 HOH HOH . E 4 HOH A 14 214 81 HOH HOH . E 4 HOH A 15 215 82 HOH HOH . E 4 HOH A 16 216 89 HOH HOH . E 4 HOH A 17 217 90 HOH HOH . E 4 HOH A 18 218 91 HOH HOH . E 4 HOH A 19 219 93 HOH HOH . E 4 HOH A 20 220 96 HOH HOH . E 4 HOH A 21 221 97 HOH HOH . E 4 HOH A 22 222 98 HOH HOH . E 4 HOH A 23 223 109 HOH HOH . E 4 HOH A 24 224 110 HOH HOH . E 4 HOH A 25 225 112 HOH HOH . E 4 HOH A 26 226 115 HOH HOH . E 4 HOH A 27 227 117 HOH HOH . E 4 HOH A 28 228 118 HOH HOH . E 4 HOH A 29 229 119 HOH HOH . E 4 HOH A 30 230 121 HOH HOH . E 4 HOH A 31 231 125 HOH HOH . E 4 HOH A 32 232 129 HOH HOH . E 4 HOH A 33 233 130 HOH HOH . E 4 HOH A 34 234 131 HOH HOH . E 4 HOH A 35 235 134 HOH HOH . E 4 HOH A 36 236 135 HOH HOH . E 4 HOH A 37 237 137 HOH HOH . E 4 HOH A 38 238 138 HOH HOH . F 4 HOH B 1 203 1 HOH HOH . F 4 HOH B 2 204 2 HOH HOH . F 4 HOH B 3 205 3 HOH HOH . F 4 HOH B 4 206 4 HOH HOH . F 4 HOH B 5 207 5 HOH HOH . F 4 HOH B 6 208 6 HOH HOH . F 4 HOH B 7 209 7 HOH HOH . F 4 HOH B 8 210 9 HOH HOH . F 4 HOH B 9 211 10 HOH HOH . F 4 HOH B 10 212 13 HOH HOH . F 4 HOH B 11 213 14 HOH HOH . F 4 HOH B 12 214 15 HOH HOH . F 4 HOH B 13 215 16 HOH HOH . F 4 HOH B 14 216 17 HOH HOH . F 4 HOH B 15 217 18 HOH HOH . F 4 HOH B 16 218 19 HOH HOH . F 4 HOH B 17 219 20 HOH HOH . F 4 HOH B 18 220 21 HOH HOH . F 4 HOH B 19 221 23 HOH HOH . F 4 HOH B 20 222 24 HOH HOH . F 4 HOH B 21 223 25 HOH HOH . F 4 HOH B 22 224 26 HOH HOH . F 4 HOH B 23 225 27 HOH HOH . F 4 HOH B 24 226 28 HOH HOH . F 4 HOH B 25 227 29 HOH HOH . F 4 HOH B 26 228 30 HOH HOH . F 4 HOH B 27 229 31 HOH HOH . F 4 HOH B 28 230 33 HOH HOH . F 4 HOH B 29 231 34 HOH HOH . F 4 HOH B 30 232 35 HOH HOH . F 4 HOH B 31 233 37 HOH HOH . F 4 HOH B 32 234 38 HOH HOH . F 4 HOH B 33 235 39 HOH HOH . F 4 HOH B 34 236 40 HOH HOH . F 4 HOH B 35 237 41 HOH HOH . F 4 HOH B 36 238 42 HOH HOH . F 4 HOH B 37 239 43 HOH HOH . F 4 HOH B 38 240 44 HOH HOH . F 4 HOH B 39 241 45 HOH HOH . F 4 HOH B 40 242 46 HOH HOH . F 4 HOH B 41 243 47 HOH HOH . F 4 HOH B 42 244 48 HOH HOH . F 4 HOH B 43 245 49 HOH HOH . F 4 HOH B 44 246 50 HOH HOH . F 4 HOH B 45 247 51 HOH HOH . F 4 HOH B 46 248 52 HOH HOH . F 4 HOH B 47 249 53 HOH HOH . F 4 HOH B 48 250 55 HOH HOH . F 4 HOH B 49 251 57 HOH HOH . F 4 HOH B 50 252 58 HOH HOH . F 4 HOH B 51 253 60 HOH HOH . F 4 HOH B 52 254 61 HOH HOH . F 4 HOH B 53 255 63 HOH HOH . F 4 HOH B 54 256 64 HOH HOH . F 4 HOH B 55 257 65 HOH HOH . F 4 HOH B 56 258 66 HOH HOH . F 4 HOH B 57 259 67 HOH HOH . F 4 HOH B 58 260 69 HOH HOH . F 4 HOH B 59 261 70 HOH HOH . F 4 HOH B 60 262 71 HOH HOH . F 4 HOH B 61 263 72 HOH HOH . F 4 HOH B 62 264 73 HOH HOH . F 4 HOH B 63 265 74 HOH HOH . F 4 HOH B 64 266 75 HOH HOH . F 4 HOH B 65 267 77 HOH HOH . F 4 HOH B 66 268 78 HOH HOH . F 4 HOH B 67 269 80 HOH HOH . F 4 HOH B 68 270 83 HOH HOH . F 4 HOH B 69 271 84 HOH HOH . F 4 HOH B 70 272 85 HOH HOH . F 4 HOH B 71 273 86 HOH HOH . F 4 HOH B 72 274 87 HOH HOH . F 4 HOH B 73 275 88 HOH HOH . F 4 HOH B 74 276 92 HOH HOH . F 4 HOH B 75 277 94 HOH HOH . F 4 HOH B 76 278 95 HOH HOH . F 4 HOH B 77 279 99 HOH HOH . F 4 HOH B 78 280 100 HOH HOH . F 4 HOH B 79 281 101 HOH HOH . F 4 HOH B 80 282 102 HOH HOH . F 4 HOH B 81 283 103 HOH HOH . F 4 HOH B 82 284 104 HOH HOH . F 4 HOH B 83 285 105 HOH HOH . F 4 HOH B 84 286 106 HOH HOH . F 4 HOH B 85 287 107 HOH HOH . F 4 HOH B 86 288 108 HOH HOH . F 4 HOH B 87 289 111 HOH HOH . F 4 HOH B 88 290 113 HOH HOH . F 4 HOH B 89 291 114 HOH HOH . F 4 HOH B 90 292 116 HOH HOH . F 4 HOH B 91 293 120 HOH HOH . F 4 HOH B 92 294 122 HOH HOH . F 4 HOH B 93 295 123 HOH HOH . F 4 HOH B 94 296 124 HOH HOH . F 4 HOH B 95 297 126 HOH HOH . F 4 HOH B 96 298 127 HOH HOH . F 4 HOH B 97 299 128 HOH HOH . F 4 HOH B 98 300 132 HOH HOH . F 4 HOH B 99 301 133 HOH HOH . F 4 HOH B 100 302 136 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . D 3 10.754 52.372 38.811 1 65.14 ? C1 PGE 202 B 1 HETATM 2 O O1 PGE . . . D 3 11.613 51.868 39.854 1 65.25 ? O1 PGE 202 B 1 HETATM 3 C C2 PGE . . . D 3 10.466 51.252 37.812 1 67.07 ? C2 PGE 202 B 1 HETATM 4 O O2 PGE . . . D 3 9.826 51.748 36.631 1 69.65 ? O2 PGE 202 B 1 HETATM 5 C C3 PGE . . . D 3 9.286 50.652 35.909 1 69.53 ? C3 PGE 202 B 1 HETATM 6 C C4 PGE . . . D 3 8.437 51.13 34.739 1 70.75 ? C4 PGE 202 B 1 HETATM 7 O O4 PGE . . . D 3 5.825 47.94 32.293 1 68.64 ? O4 PGE 202 B 1 HETATM 8 C C6 PGE . . . D 3 7.139 48.288 32.757 1 68.76 ? C6 PGE 202 B 1 HETATM 9 C C5 PGE . . . D 3 7.133 49.733 33.246 1 71.04 ? C5 PGE 202 B 1 HETATM 10 O O3 PGE . . . D 3 8.433 50.123 33.709 1 71.28 ? O3 PGE 202 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 10 #