data_2I1M # _model_server_result.job_id fTdZcX4EJtFUZK_9BbFyAA _model_server_result.datetime_utc '2024-11-22 05:46:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2i1m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1000}' # _entry.id 2I1M # _exptl.entry_id 2I1M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 339.388 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '5-CYANO-FURAN-2-CARBOXYLIC ACID [5-HYDROXYMETHYL-2-(4-METHYL-PIPERIDIN-1-YL)-PHENYL]-AMIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2I1M _cell.length_a 80.44 _cell.length_b 80.44 _cell.length_c 143.76 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2I1M _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H21 N3 O3' _chem_comp.formula_weight 339.388 _chem_comp.id 5CN _chem_comp.mon_nstd_flag . _chem_comp.name '5-CYANO-FURAN-2-CARBOXYLIC ACID [5-HYDROXYMETHYL-2-(4-METHYL-PIPERIDIN-1-YL)-PHENYL]-AMIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N1 5CN sing 1 n n C1 C2 5CN doub 2 n y C1 C6 5CN sing 3 n y C2 C3 5CN sing 4 n y C2 H2 5CN sing 5 n n C3 C4 5CN doub 6 n y C3 H3 5CN sing 7 n n C7 C11 5CN sing 8 n n C7 C8 5CN sing 9 n n C7 H71 5CN sing 10 n n C7 H72 5CN sing 11 n n C8 N1 5CN sing 12 n n C8 H81 5CN sing 13 n n C8 H82 5CN sing 14 n n C9 C10 5CN sing 15 n n C9 N1 5CN sing 16 n n C9 H91 5CN sing 17 n n C9 H92 5CN sing 18 n n C10 C11 5CN sing 19 n n C10 H101 5CN sing 20 n n C10 H102 5CN sing 21 n n C11 C12 5CN sing 22 n n C11 H11 5CN sing 23 n n C12 H121 5CN sing 24 n n C12 H122 5CN sing 25 n n C12 H123 5CN sing 26 n n C13 C4 5CN sing 27 n n C13 O1 5CN sing 28 n n C13 H131 5CN sing 29 n n C13 H132 5CN sing 30 n n C14 C15 5CN sing 31 n n C14 N2 5CN sing 32 n n C14 O2 5CN doub 33 n n C15 O3 5CN sing 34 n y C15 C16 5CN doub 35 n y C16 C17 5CN sing 36 n y C16 H16 5CN sing 37 n n C19 N3 5CN trip 38 n n C19 C18 5CN sing 39 n n C4 C5 5CN sing 40 n y C5 C6 5CN doub 41 n y C5 H5 5CN sing 42 n n C6 N2 5CN sing 43 n n O1 HO1 5CN sing 44 n n N2 HN2 5CN sing 45 n n C17 C18 5CN doub 46 n y C17 H17 5CN sing 47 n n C18 O3 5CN sing 48 n y # _atom_sites.entry_id 2I1M _atom_sites.fract_transf_matrix[1][1] 0.012432 _atom_sites.fract_transf_matrix[1][2] 0.007177 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014355 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006956 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5CN A 1 1000 1000 5CN 5CN . C 3 HOH A 1 1 1 HOH HOH . C 3 HOH A 2 2 2 HOH HOH . C 3 HOH A 3 3 3 HOH HOH . C 3 HOH A 4 4 4 HOH HOH . C 3 HOH A 5 5 5 HOH HOH . C 3 HOH A 6 6 6 HOH HOH . C 3 HOH A 7 7 7 HOH HOH . C 3 HOH A 8 8 8 HOH HOH . C 3 HOH A 9 9 9 HOH HOH . C 3 HOH A 10 10 10 HOH HOH . C 3 HOH A 11 11 11 HOH HOH . C 3 HOH A 12 12 12 HOH HOH . C 3 HOH A 13 13 13 HOH HOH . C 3 HOH A 14 14 14 HOH HOH . C 3 HOH A 15 15 15 HOH HOH . C 3 HOH A 16 16 16 HOH HOH . C 3 HOH A 17 17 17 HOH HOH . C 3 HOH A 18 18 18 HOH HOH . C 3 HOH A 19 19 19 HOH HOH . C 3 HOH A 20 20 20 HOH HOH . C 3 HOH A 21 21 21 HOH HOH . C 3 HOH A 22 22 22 HOH HOH . C 3 HOH A 23 23 23 HOH HOH . C 3 HOH A 24 24 24 HOH HOH . C 3 HOH A 25 25 25 HOH HOH . C 3 HOH A 26 26 26 HOH HOH . C 3 HOH A 27 27 27 HOH HOH . C 3 HOH A 28 28 28 HOH HOH . C 3 HOH A 29 29 29 HOH HOH . C 3 HOH A 30 30 30 HOH HOH . C 3 HOH A 31 31 31 HOH HOH . C 3 HOH A 32 32 32 HOH HOH . C 3 HOH A 33 33 33 HOH HOH . C 3 HOH A 34 34 34 HOH HOH . C 3 HOH A 35 35 35 HOH HOH . C 3 HOH A 36 36 36 HOH HOH . C 3 HOH A 37 37 37 HOH HOH . C 3 HOH A 38 38 38 HOH HOH . C 3 HOH A 39 39 39 HOH HOH . C 3 HOH A 40 40 40 HOH HOH . C 3 HOH A 41 41 41 HOH HOH . C 3 HOH A 42 42 42 HOH HOH . C 3 HOH A 43 43 43 HOH HOH . C 3 HOH A 44 44 44 HOH HOH . C 3 HOH A 45 45 45 HOH HOH . C 3 HOH A 46 47 47 HOH HOH . C 3 HOH A 47 48 48 HOH HOH . C 3 HOH A 48 49 49 HOH HOH . C 3 HOH A 49 50 50 HOH HOH . C 3 HOH A 50 51 51 HOH HOH . C 3 HOH A 51 52 52 HOH HOH . C 3 HOH A 52 53 53 HOH HOH . C 3 HOH A 53 54 54 HOH HOH . C 3 HOH A 54 55 55 HOH HOH . C 3 HOH A 55 56 56 HOH HOH . C 3 HOH A 56 57 57 HOH HOH . C 3 HOH A 57 58 58 HOH HOH . C 3 HOH A 58 59 59 HOH HOH . C 3 HOH A 59 60 60 HOH HOH . C 3 HOH A 60 61 61 HOH HOH . C 3 HOH A 61 62 62 HOH HOH . C 3 HOH A 62 63 63 HOH HOH . C 3 HOH A 63 64 64 HOH HOH . C 3 HOH A 64 65 65 HOH HOH . C 3 HOH A 65 67 67 HOH HOH . C 3 HOH A 66 68 68 HOH HOH . C 3 HOH A 67 69 69 HOH HOH . C 3 HOH A 68 70 70 HOH HOH . C 3 HOH A 69 72 72 HOH HOH . C 3 HOH A 70 73 73 HOH HOH . C 3 HOH A 71 74 74 HOH HOH . C 3 HOH A 72 75 75 HOH HOH . C 3 HOH A 73 76 76 HOH HOH . C 3 HOH A 74 77 77 HOH HOH . C 3 HOH A 75 78 78 HOH HOH . C 3 HOH A 76 79 79 HOH HOH . C 3 HOH A 77 80 80 HOH HOH . C 3 HOH A 78 81 81 HOH HOH . C 3 HOH A 79 82 82 HOH HOH . C 3 HOH A 80 84 84 HOH HOH . C 3 HOH A 81 85 85 HOH HOH . C 3 HOH A 82 86 86 HOH HOH . C 3 HOH A 83 87 87 HOH HOH . C 3 HOH A 84 88 88 HOH HOH . C 3 HOH A 85 89 89 HOH HOH . C 3 HOH A 86 90 90 HOH HOH . C 3 HOH A 87 91 91 HOH HOH . C 3 HOH A 88 92 92 HOH HOH . C 3 HOH A 89 93 93 HOH HOH . C 3 HOH A 90 94 94 HOH HOH . C 3 HOH A 91 97 97 HOH HOH . C 3 HOH A 92 98 98 HOH HOH . C 3 HOH A 93 99 99 HOH HOH . C 3 HOH A 94 100 100 HOH HOH . C 3 HOH A 95 101 101 HOH HOH . C 3 HOH A 96 102 102 HOH HOH . C 3 HOH A 97 103 103 HOH HOH . C 3 HOH A 98 104 104 HOH HOH . C 3 HOH A 99 105 105 HOH HOH . C 3 HOH A 100 106 106 HOH HOH . C 3 HOH A 101 107 107 HOH HOH . C 3 HOH A 102 108 108 HOH HOH . C 3 HOH A 103 109 109 HOH HOH . C 3 HOH A 104 110 110 HOH HOH . C 3 HOH A 105 111 111 HOH HOH . C 3 HOH A 106 112 112 HOH HOH . C 3 HOH A 107 114 114 HOH HOH . C 3 HOH A 108 115 115 HOH HOH . C 3 HOH A 109 116 116 HOH HOH . C 3 HOH A 110 117 117 HOH HOH . C 3 HOH A 111 118 118 HOH HOH . C 3 HOH A 112 119 119 HOH HOH . C 3 HOH A 113 120 120 HOH HOH . C 3 HOH A 114 121 121 HOH HOH . C 3 HOH A 115 122 122 HOH HOH . C 3 HOH A 116 123 123 HOH HOH . C 3 HOH A 117 124 124 HOH HOH . C 3 HOH A 118 125 125 HOH HOH . C 3 HOH A 119 126 126 HOH HOH . C 3 HOH A 120 127 127 HOH HOH . C 3 HOH A 121 128 128 HOH HOH . C 3 HOH A 122 129 129 HOH HOH . C 3 HOH A 123 130 130 HOH HOH . C 3 HOH A 124 131 131 HOH HOH . C 3 HOH A 125 132 132 HOH HOH . C 3 HOH A 126 133 133 HOH HOH . C 3 HOH A 127 134 134 HOH HOH . C 3 HOH A 128 135 135 HOH HOH . C 3 HOH A 129 136 136 HOH HOH . C 3 HOH A 130 137 137 HOH HOH . C 3 HOH A 131 138 138 HOH HOH . C 3 HOH A 132 140 140 HOH HOH . C 3 HOH A 133 141 141 HOH HOH . C 3 HOH A 134 142 142 HOH HOH . C 3 HOH A 135 143 143 HOH HOH . C 3 HOH A 136 144 144 HOH HOH . C 3 HOH A 137 145 145 HOH HOH . C 3 HOH A 138 146 146 HOH HOH . C 3 HOH A 139 147 147 HOH HOH . C 3 HOH A 140 148 148 HOH HOH . C 3 HOH A 141 149 149 HOH HOH . C 3 HOH A 142 150 150 HOH HOH . C 3 HOH A 143 151 151 HOH HOH . C 3 HOH A 144 152 152 HOH HOH . C 3 HOH A 145 153 153 HOH HOH . C 3 HOH A 146 154 154 HOH HOH . C 3 HOH A 147 155 155 HOH HOH . C 3 HOH A 148 156 156 HOH HOH . C 3 HOH A 149 157 157 HOH HOH . C 3 HOH A 150 158 158 HOH HOH . C 3 HOH A 151 159 159 HOH HOH . C 3 HOH A 152 160 160 HOH HOH . C 3 HOH A 153 161 161 HOH HOH . C 3 HOH A 154 162 162 HOH HOH . C 3 HOH A 155 163 163 HOH HOH . C 3 HOH A 156 164 164 HOH HOH . C 3 HOH A 157 165 165 HOH HOH . C 3 HOH A 158 166 166 HOH HOH . C 3 HOH A 159 167 167 HOH HOH . C 3 HOH A 160 168 168 HOH HOH . C 3 HOH A 161 169 169 HOH HOH . C 3 HOH A 162 170 170 HOH HOH . C 3 HOH A 163 171 171 HOH HOH . C 3 HOH A 164 172 172 HOH HOH . C 3 HOH A 165 173 173 HOH HOH . C 3 HOH A 166 174 174 HOH HOH . C 3 HOH A 167 175 175 HOH HOH . C 3 HOH A 168 176 176 HOH HOH . C 3 HOH A 169 177 177 HOH HOH . C 3 HOH A 170 178 178 HOH HOH . C 3 HOH A 171 179 179 HOH HOH . C 3 HOH A 172 180 180 HOH HOH . C 3 HOH A 173 181 181 HOH HOH . C 3 HOH A 174 182 182 HOH HOH . C 3 HOH A 175 183 183 HOH HOH . C 3 HOH A 176 184 184 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 5CN . . . B 2 45.826 40.299 -8.534 1 31.69 ? C1 5CN 1000 A 1 HETATM 2 C C2 5CN . . . B 2 45.17 39.086 -8.952 1 29.89 ? C2 5CN 1000 A 1 HETATM 3 C C3 5CN . . . B 2 45.271 38.614 -10.286 1 31.52 ? C3 5CN 1000 A 1 HETATM 4 C C7 5CN . . . B 2 46.945 41.023 -4.949 1 31.97 ? C7 5CN 1000 A 1 HETATM 5 C C8 5CN . . . B 2 46.954 40.327 -6.323 1 41.29 ? C8 5CN 1000 A 1 HETATM 6 C C9 5CN . . . B 2 44.449 41.053 -6.597 1 32.39 ? C9 5CN 1000 A 1 HETATM 7 C C10 5CN . . . B 2 44.553 41.687 -5.196 1 37.83 ? C10 5CN 1000 A 1 HETATM 8 C C11 5CN . . . B 2 45.565 40.971 -4.294 1 34.03 ? C11 5CN 1000 A 1 HETATM 9 C C12 5CN . . . B 2 45.615 41.649 -2.925 1 23.21 ? C12 5CN 1000 A 1 HETATM 10 C C13 5CN . . . B 2 46.168 38.824 -12.66 1 31.36 ? C13 5CN 1000 A 1 HETATM 11 C C14 5CN . . . B 2 48.036 43.176 -9.627 1 25.14 ? C14 5CN 1000 A 1 HETATM 12 C C15 5CN . . . B 2 48.33 44.304 -8.735 1 23.22 ? C15 5CN 1000 A 1 HETATM 13 C C16 5CN . . . B 2 49.194 45.378 -8.874 1 23.29 ? C16 5CN 1000 A 1 HETATM 14 C C19 5CN . . . B 2 47.61 45.887 -5.642 1 21.54 ? C19 5CN 1000 A 1 HETATM 15 C C4 5CN . . . B 2 46.03 39.339 -11.25 1 32.27 ? C4 5CN 1000 A 1 HETATM 16 C C5 5CN . . . B 2 46.683 40.554 -10.853 1 33.3 ? C5 5CN 1000 A 1 HETATM 17 C C6 5CN . . . B 2 46.586 41.046 -9.505 1 30.03 ? C6 5CN 1000 A 1 HETATM 18 N N1 5CN . . . B 2 45.765 40.654 -7.172 1 35.39 ? N1 5CN 1000 A 1 HETATM 19 O O1 5CN . . . B 2 45.134 39.389 -13.461 1 36.95 ? O1 5CN 1000 A 1 HETATM 20 N N2 5CN . . . B 2 47.164 42.271 -9.05 1 25.6 ? N2 5CN 1000 A 1 HETATM 21 O O2 5CN . . . B 2 48.53 43.082 -10.759 1 34.68 ? O2 5CN 1000 A 1 HETATM 22 C C17 5CN . . . B 2 49.071 46.171 -7.701 1 18.13 ? C17 5CN 1000 A 1 HETATM 23 C C18 5CN . . . B 2 48.137 45.548 -6.918 1 22.21 ? C18 5CN 1000 A 1 HETATM 24 O O3 5CN . . . B 2 47.673 44.412 -7.527 1 24.54 ? O3 5CN 1000 A 1 HETATM 25 N N3 5CN . . . B 2 47.19 46.175 -4.595 1 23.05 ? N3 5CN 1000 A 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 467 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 25 #