data_2I1V # _model_server_result.job_id meuvMS286FfDv5cavuJoNA _model_server_result.datetime_utc '2024-11-19 06:26:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2i1v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":720}' # _entry.id 2I1V # _exptl.entry_id 2I1V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 260.136 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 6-O-phosphono-beta-D-fructofuranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2I1V _cell.length_a 102.14 _cell.length_b 102.14 _cell.length_c 259.44 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2I1V _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 51.07 88.455835 43.24 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H13 O9 P' _chem_comp.formula_weight 260.136 _chem_comp.id F6P _chem_comp.mon_nstd_flag n _chem_comp.name 6-O-phosphono-beta-D-fructofuranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms FRUCTOSE-6-PHOSPHATE;6-O-phosphono-beta-D-fructose;6-O-phosphono-D-fructose;6-O-phosphono-fructose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 F6P sing 127 n n O1 HO1 F6P sing 128 n n C1 C2 F6P sing 129 n n C1 H11 F6P sing 130 n n C1 H12 F6P sing 131 n n C2 O2 F6P sing 132 n n C2 C3 F6P sing 133 n n C2 O5 F6P sing 134 n n O2 HO2 F6P sing 135 n n C3 O3 F6P sing 136 n n C3 C4 F6P sing 137 n n C3 H3 F6P sing 138 n n O3 HO3 F6P sing 139 n n C4 O4 F6P sing 140 n n C4 C5 F6P sing 141 n n C4 H4 F6P sing 142 n n O4 HO4 F6P sing 143 n n C5 O5 F6P sing 144 n n C5 C6 F6P sing 145 n n C5 H5 F6P sing 146 n n C6 O6 F6P sing 147 n n C6 H61 F6P sing 148 n n C6 H62 F6P sing 149 n n O6 P F6P sing 150 n n P O1P F6P doub 151 n n P O2P F6P sing 152 n n P O3P F6P sing 153 n n O2P HOP2 F6P sing 154 n n O3P HOP3 F6P sing 155 n n # _pdbx_chem_comp_identifier.comp_id F6P _pdbx_chem_comp_identifier.identifier b-D-Fruf6PO3 _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 2I1V _atom_sites.fract_transf_matrix[1][1] 0.00979 _atom_sites.fract_transf_matrix[1][2] 0.005652 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011305 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003854 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FDP B 1 710 710 FDP FBP . C 3 F6P B 1 720 720 F6P F6P . D 4 ADP B 1 700 700 ADP ADP . E 5 PHS B 1 730 730 PHS PHS . F 6 HOH B 1 731 1 HOH HOH . F 6 HOH B 2 732 2 HOH HOH . F 6 HOH B 3 733 3 HOH HOH . F 6 HOH B 4 734 4 HOH HOH . F 6 HOH B 5 735 5 HOH HOH . F 6 HOH B 6 736 6 HOH HOH . F 6 HOH B 7 737 7 HOH HOH . F 6 HOH B 8 738 8 HOH HOH . F 6 HOH B 9 739 9 HOH HOH . F 6 HOH B 10 740 10 HOH HOH . F 6 HOH B 11 741 11 HOH HOH . F 6 HOH B 12 742 12 HOH HOH . F 6 HOH B 13 743 13 HOH HOH . F 6 HOH B 14 744 14 HOH HOH . F 6 HOH B 15 745 15 HOH HOH . F 6 HOH B 16 746 16 HOH HOH . F 6 HOH B 17 747 17 HOH HOH . F 6 HOH B 18 748 18 HOH HOH . F 6 HOH B 19 749 19 HOH HOH . F 6 HOH B 20 750 20 HOH HOH . F 6 HOH B 21 751 21 HOH HOH . F 6 HOH B 22 752 22 HOH HOH . F 6 HOH B 23 753 23 HOH HOH . F 6 HOH B 24 754 24 HOH HOH . F 6 HOH B 25 755 25 HOH HOH . F 6 HOH B 26 756 26 HOH HOH . F 6 HOH B 27 757 27 HOH HOH . F 6 HOH B 28 758 28 HOH HOH . F 6 HOH B 29 759 29 HOH HOH . F 6 HOH B 30 760 30 HOH HOH . F 6 HOH B 31 761 31 HOH HOH . F 6 HOH B 32 762 32 HOH HOH . F 6 HOH B 33 763 33 HOH HOH . F 6 HOH B 34 764 34 HOH HOH . F 6 HOH B 35 765 35 HOH HOH . F 6 HOH B 36 766 36 HOH HOH . F 6 HOH B 37 767 37 HOH HOH . F 6 HOH B 38 768 38 HOH HOH . F 6 HOH B 39 769 39 HOH HOH . F 6 HOH B 40 770 40 HOH HOH . F 6 HOH B 41 771 41 HOH HOH . F 6 HOH B 42 772 42 HOH HOH . F 6 HOH B 43 773 43 HOH HOH . F 6 HOH B 44 774 44 HOH HOH . F 6 HOH B 45 775 45 HOH HOH . F 6 HOH B 46 776 46 HOH HOH . F 6 HOH B 47 777 47 HOH HOH . F 6 HOH B 48 778 48 HOH HOH . F 6 HOH B 49 779 49 HOH HOH . F 6 HOH B 50 780 50 HOH HOH . F 6 HOH B 51 781 51 HOH HOH . F 6 HOH B 52 782 52 HOH HOH . F 6 HOH B 53 783 53 HOH HOH . F 6 HOH B 54 784 54 HOH HOH . F 6 HOH B 55 785 55 HOH HOH . F 6 HOH B 56 786 56 HOH HOH . F 6 HOH B 57 787 57 HOH HOH . F 6 HOH B 58 788 58 HOH HOH . F 6 HOH B 59 789 59 HOH HOH . F 6 HOH B 60 790 60 HOH HOH . F 6 HOH B 61 791 61 HOH HOH . F 6 HOH B 62 792 62 HOH HOH . F 6 HOH B 63 793 63 HOH HOH . F 6 HOH B 64 794 64 HOH HOH . F 6 HOH B 65 795 65 HOH HOH . F 6 HOH B 66 796 66 HOH HOH . F 6 HOH B 67 797 67 HOH HOH . F 6 HOH B 68 798 68 HOH HOH . F 6 HOH B 69 799 70 HOH HOH . F 6 HOH B 70 800 71 HOH HOH . F 6 HOH B 71 801 72 HOH HOH . F 6 HOH B 72 802 73 HOH HOH . F 6 HOH B 73 803 74 HOH HOH . F 6 HOH B 74 804 75 HOH HOH . F 6 HOH B 75 805 76 HOH HOH . F 6 HOH B 76 806 78 HOH HOH . F 6 HOH B 77 807 79 HOH HOH . F 6 HOH B 78 808 80 HOH HOH . F 6 HOH B 79 809 81 HOH HOH . F 6 HOH B 80 810 82 HOH HOH . F 6 HOH B 81 811 83 HOH HOH . F 6 HOH B 82 812 84 HOH HOH . F 6 HOH B 83 813 85 HOH HOH . F 6 HOH B 84 814 86 HOH HOH . F 6 HOH B 85 815 87 HOH HOH . F 6 HOH B 86 816 88 HOH HOH . F 6 HOH B 87 817 89 HOH HOH . F 6 HOH B 88 818 90 HOH HOH . F 6 HOH B 89 819 91 HOH HOH . F 6 HOH B 90 820 92 HOH HOH . F 6 HOH B 91 821 93 HOH HOH . F 6 HOH B 92 822 94 HOH HOH . F 6 HOH B 93 823 95 HOH HOH . F 6 HOH B 94 824 96 HOH HOH . F 6 HOH B 95 825 97 HOH HOH . F 6 HOH B 96 826 99 HOH HOH . F 6 HOH B 97 827 100 HOH HOH . F 6 HOH B 98 828 102 HOH HOH . F 6 HOH B 99 829 103 HOH HOH . F 6 HOH B 100 830 104 HOH HOH . F 6 HOH B 101 831 105 HOH HOH . F 6 HOH B 102 832 106 HOH HOH . F 6 HOH B 103 833 107 HOH HOH . F 6 HOH B 104 834 108 HOH HOH . F 6 HOH B 105 835 109 HOH HOH . F 6 HOH B 106 836 110 HOH HOH . F 6 HOH B 107 837 111 HOH HOH . F 6 HOH B 108 838 112 HOH HOH . F 6 HOH B 109 839 113 HOH HOH . F 6 HOH B 110 840 114 HOH HOH . F 6 HOH B 111 841 115 HOH HOH . F 6 HOH B 112 842 116 HOH HOH . F 6 HOH B 113 843 117 HOH HOH . F 6 HOH B 114 844 118 HOH HOH . F 6 HOH B 115 845 119 HOH HOH . F 6 HOH B 116 846 120 HOH HOH . F 6 HOH B 117 847 121 HOH HOH . F 6 HOH B 118 848 122 HOH HOH . F 6 HOH B 119 849 123 HOH HOH . F 6 HOH B 120 850 124 HOH HOH . F 6 HOH B 121 851 126 HOH HOH . F 6 HOH B 122 852 127 HOH HOH . F 6 HOH B 123 853 128 HOH HOH . F 6 HOH B 124 854 129 HOH HOH . F 6 HOH B 125 855 130 HOH HOH . F 6 HOH B 126 856 131 HOH HOH . F 6 HOH B 127 857 132 HOH HOH . F 6 HOH B 128 858 133 HOH HOH . F 6 HOH B 129 859 134 HOH HOH . F 6 HOH B 130 860 136 HOH HOH . F 6 HOH B 131 861 137 HOH HOH . F 6 HOH B 132 862 138 HOH HOH . F 6 HOH B 133 863 139 HOH HOH . F 6 HOH B 134 864 140 HOH HOH . F 6 HOH B 135 865 141 HOH HOH . F 6 HOH B 136 866 143 HOH HOH . F 6 HOH B 137 867 145 HOH HOH . F 6 HOH B 138 868 147 HOH HOH . F 6 HOH B 139 869 148 HOH HOH . F 6 HOH B 140 870 149 HOH HOH . F 6 HOH B 141 871 150 HOH HOH . F 6 HOH B 142 872 151 HOH HOH . F 6 HOH B 143 873 152 HOH HOH . F 6 HOH B 144 874 153 HOH HOH . F 6 HOH B 145 875 155 HOH HOH . F 6 HOH B 146 876 158 HOH HOH . F 6 HOH B 147 877 159 HOH HOH . F 6 HOH B 148 878 161 HOH HOH . F 6 HOH B 149 879 163 HOH HOH . F 6 HOH B 150 880 164 HOH HOH . F 6 HOH B 151 881 168 HOH HOH . F 6 HOH B 152 882 169 HOH HOH . F 6 HOH B 153 883 170 HOH HOH . F 6 HOH B 154 884 172 HOH HOH . F 6 HOH B 155 885 173 HOH HOH . F 6 HOH B 156 886 174 HOH HOH . F 6 HOH B 157 887 176 HOH HOH . F 6 HOH B 158 888 177 HOH HOH . F 6 HOH B 159 889 178 HOH HOH . F 6 HOH B 160 890 179 HOH HOH . F 6 HOH B 161 891 180 HOH HOH . F 6 HOH B 162 892 181 HOH HOH . F 6 HOH B 163 893 182 HOH HOH . F 6 HOH B 164 894 183 HOH HOH . F 6 HOH B 165 895 185 HOH HOH . F 6 HOH B 166 896 186 HOH HOH . F 6 HOH B 167 897 187 HOH HOH . F 6 HOH B 168 898 192 HOH HOH . F 6 HOH B 169 899 193 HOH HOH . F 6 HOH B 170 900 198 HOH HOH . F 6 HOH B 171 901 199 HOH HOH . F 6 HOH B 172 902 200 HOH HOH . F 6 HOH B 173 903 202 HOH HOH . F 6 HOH B 174 904 203 HOH HOH . F 6 HOH B 175 905 204 HOH HOH . F 6 HOH B 176 906 205 HOH HOH . F 6 HOH B 177 907 206 HOH HOH . F 6 HOH B 178 908 208 HOH HOH . F 6 HOH B 179 909 210 HOH HOH . F 6 HOH B 180 910 211 HOH HOH . F 6 HOH B 181 911 212 HOH HOH . F 6 HOH B 182 912 214 HOH HOH . F 6 HOH B 183 913 215 HOH HOH . F 6 HOH B 184 914 217 HOH HOH . F 6 HOH B 185 915 218 HOH HOH . F 6 HOH B 186 916 219 HOH HOH . F 6 HOH B 187 917 220 HOH HOH . F 6 HOH B 188 918 222 HOH HOH . F 6 HOH B 189 919 223 HOH HOH . F 6 HOH B 190 920 225 HOH HOH . F 6 HOH B 191 921 226 HOH HOH . F 6 HOH B 192 922 229 HOH HOH . F 6 HOH B 193 923 230 HOH HOH . F 6 HOH B 194 924 231 HOH HOH . F 6 HOH B 195 925 232 HOH HOH . F 6 HOH B 196 926 233 HOH HOH . F 6 HOH B 197 927 234 HOH HOH . F 6 HOH B 198 928 236 HOH HOH . F 6 HOH B 199 929 238 HOH HOH . F 6 HOH B 200 930 239 HOH HOH . F 6 HOH B 201 931 243 HOH HOH . F 6 HOH B 202 932 244 HOH HOH . F 6 HOH B 203 933 247 HOH HOH . F 6 HOH B 204 934 249 HOH HOH . F 6 HOH B 205 935 252 HOH HOH . F 6 HOH B 206 936 254 HOH HOH . F 6 HOH B 207 937 256 HOH HOH . F 6 HOH B 208 938 258 HOH HOH . F 6 HOH B 209 939 259 HOH HOH . F 6 HOH B 210 940 260 HOH HOH . F 6 HOH B 211 941 264 HOH HOH . F 6 HOH B 212 942 266 HOH HOH . F 6 HOH B 213 943 267 HOH HOH . F 6 HOH B 214 944 268 HOH HOH . F 6 HOH B 215 945 269 HOH HOH . F 6 HOH B 216 946 270 HOH HOH . F 6 HOH B 217 947 272 HOH HOH . F 6 HOH B 218 948 274 HOH HOH . F 6 HOH B 219 949 275 HOH HOH . F 6 HOH B 220 950 277 HOH HOH . F 6 HOH B 221 951 278 HOH HOH . F 6 HOH B 222 952 279 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 F6P . . . C 3 -44.112 67.989 13.911 1 50.49 ? O1 F6P 720 B 1 HETATM 2 C C1 F6P . . . C 3 -43.289 67.222 14.782 1 37.63 ? C1 F6P 720 B 1 HETATM 3 C C2 F6P . . . C 3 -41.91 67.86 14.814 1 35.62 ? C2 F6P 720 B 1 HETATM 4 O O2 F6P . . . C 3 -41.036 67.1 15.647 1 30.63 ? O2 F6P 720 B 1 HETATM 5 C C3 F6P . . . C 3 -42.069 69.333 15.305 1 33.82 ? C3 F6P 720 B 1 HETATM 6 O O3 F6P . . . C 3 -41.865 69.499 16.707 1 35.19 ? O3 F6P 720 B 1 HETATM 7 C C4 F6P . . . C 3 -41.022 70.035 14.416 1 33.81 ? C4 F6P 720 B 1 HETATM 8 O O4 F6P . . . C 3 -41.217 71.444 14.36 1 33.41 ? O4 F6P 720 B 1 HETATM 9 C C5 F6P . . . C 3 -41.338 69.301 13.143 1 35.12 ? C5 F6P 720 B 1 HETATM 10 O O5 F6P . . . C 3 -41.402 67.924 13.468 1 33.4 ? O5 F6P 720 B 1 HETATM 11 C C6 F6P . . . C 3 -40.405 69.649 11.988 1 35.85 ? C6 F6P 720 B 1 HETATM 12 O O6 F6P . . . C 3 -40.828 68.863 10.882 1 36.95 ? O6 F6P 720 B 1 HETATM 13 P P F6P . . . C 3 -40.015 69.319 9.612 1 37.34 ? P F6P 720 B 1 HETATM 14 O O1P F6P . . . C 3 -38.557 69.289 9.803 1 40.76 ? O1P F6P 720 B 1 HETATM 15 O O2P F6P . . . C 3 -40.454 68.402 8.371 1 39.61 ? O2P F6P 720 B 1 HETATM 16 O O3P F6P . . . C 3 -40.464 70.826 9.316 1 37.91 ? O3P F6P 720 B 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 16 #