data_2I1Y # _model_server_result.job_id e6b4rL-ueMG1fM0Mzcau4Q _model_server_result.datetime_utc '2024-11-04 20:09:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2i1y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":3288}' # _entry.id 2I1Y # _exptl.entry_id 2I1Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2I1Y _cell.length_a 72.907 _cell.length_b 74.229 _cell.length_c 121.067 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2I1Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 2I1Y _atom_sites.fract_transf_matrix[1][1] 0.013716 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013472 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00826 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 3288 3288 GOL GOL . D 2 GOL B 1 3287 3287 GOL GOL . E 3 HOH A 1 3289 302 HOH HOH . E 3 HOH A 2 3290 304 HOH HOH . E 3 HOH A 3 3291 310 HOH HOH . E 3 HOH A 4 3292 311 HOH HOH . E 3 HOH A 5 3293 312 HOH HOH . E 3 HOH A 6 3294 315 HOH HOH . E 3 HOH A 7 3295 316 HOH HOH . E 3 HOH A 8 3296 318 HOH HOH . E 3 HOH A 9 3297 321 HOH HOH . E 3 HOH A 10 3298 325 HOH HOH . E 3 HOH A 11 3299 326 HOH HOH . E 3 HOH A 12 3300 329 HOH HOH . E 3 HOH A 13 3301 330 HOH HOH . E 3 HOH A 14 3302 333 HOH HOH . E 3 HOH A 15 3303 335 HOH HOH . E 3 HOH A 16 3304 336 HOH HOH . E 3 HOH A 17 3305 339 HOH HOH . E 3 HOH A 18 3306 341 HOH HOH . E 3 HOH A 19 3307 342 HOH HOH . E 3 HOH A 20 3308 344 HOH HOH . E 3 HOH A 21 3309 347 HOH HOH . E 3 HOH A 22 3310 350 HOH HOH . E 3 HOH A 23 3311 351 HOH HOH . E 3 HOH A 24 3312 356 HOH HOH . E 3 HOH A 25 3313 357 HOH HOH . E 3 HOH A 26 3314 362 HOH HOH . E 3 HOH A 27 3315 364 HOH HOH . E 3 HOH A 28 3316 365 HOH HOH . E 3 HOH A 29 3317 366 HOH HOH . E 3 HOH A 30 3318 367 HOH HOH . E 3 HOH A 31 3319 369 HOH HOH . E 3 HOH A 32 3320 371 HOH HOH . E 3 HOH A 33 3321 372 HOH HOH . E 3 HOH A 34 3322 373 HOH HOH . E 3 HOH A 35 3323 376 HOH HOH . E 3 HOH A 36 3324 377 HOH HOH . E 3 HOH A 37 3325 380 HOH HOH . E 3 HOH A 38 3326 381 HOH HOH . E 3 HOH A 39 3327 383 HOH HOH . E 3 HOH A 40 3328 384 HOH HOH . E 3 HOH A 41 3329 387 HOH HOH . E 3 HOH A 42 3330 390 HOH HOH . E 3 HOH A 43 3331 398 HOH HOH . E 3 HOH A 44 3332 399 HOH HOH . E 3 HOH A 45 3333 400 HOH HOH . E 3 HOH A 46 3334 401 HOH HOH . E 3 HOH A 47 3335 402 HOH HOH . E 3 HOH A 48 3336 403 HOH HOH . E 3 HOH A 49 3337 405 HOH HOH . E 3 HOH A 50 3338 406 HOH HOH . E 3 HOH A 51 3339 410 HOH HOH . E 3 HOH A 52 3340 412 HOH HOH . E 3 HOH A 53 3341 414 HOH HOH . E 3 HOH A 54 3342 417 HOH HOH . E 3 HOH A 55 3343 418 HOH HOH . E 3 HOH A 56 3344 419 HOH HOH . E 3 HOH A 57 3345 420 HOH HOH . E 3 HOH A 58 3346 422 HOH HOH . E 3 HOH A 59 3347 428 HOH HOH . E 3 HOH A 60 3348 431 HOH HOH . E 3 HOH A 61 3349 434 HOH HOH . E 3 HOH A 62 3350 447 HOH HOH . E 3 HOH A 63 3351 449 HOH HOH . E 3 HOH A 64 3352 450 HOH HOH . E 3 HOH A 65 3353 451 HOH HOH . E 3 HOH A 66 3354 452 HOH HOH . E 3 HOH A 67 3355 455 HOH HOH . E 3 HOH A 68 3356 456 HOH HOH . E 3 HOH A 69 3357 466 HOH HOH . E 3 HOH A 70 3358 467 HOH HOH . E 3 HOH A 71 3359 469 HOH HOH . E 3 HOH A 72 3360 473 HOH HOH . E 3 HOH A 73 3361 477 HOH HOH . E 3 HOH A 74 3362 480 HOH HOH . E 3 HOH A 75 3363 481 HOH HOH . E 3 HOH A 76 3364 482 HOH HOH . E 3 HOH A 77 3365 484 HOH HOH . E 3 HOH A 78 3366 487 HOH HOH . E 3 HOH A 79 3367 489 HOH HOH . E 3 HOH A 80 3368 490 HOH HOH . E 3 HOH A 81 3369 496 HOH HOH . E 3 HOH A 82 3370 499 HOH HOH . E 3 HOH A 83 3371 500 HOH HOH . E 3 HOH A 84 3372 501 HOH HOH . E 3 HOH A 85 3373 502 HOH HOH . E 3 HOH A 86 3374 503 HOH HOH . E 3 HOH A 87 3375 504 HOH HOH . E 3 HOH A 88 3376 510 HOH HOH . E 3 HOH A 89 3377 513 HOH HOH . E 3 HOH A 90 3378 519 HOH HOH . E 3 HOH A 91 3379 520 HOH HOH . E 3 HOH A 92 3380 526 HOH HOH . E 3 HOH A 93 3381 528 HOH HOH . E 3 HOH A 94 3382 530 HOH HOH . E 3 HOH A 95 3383 531 HOH HOH . E 3 HOH A 96 3384 533 HOH HOH . E 3 HOH A 97 3385 534 HOH HOH . E 3 HOH A 98 3386 536 HOH HOH . E 3 HOH A 99 3387 541 HOH HOH . E 3 HOH A 100 3388 542 HOH HOH . E 3 HOH A 101 3389 545 HOH HOH . E 3 HOH A 102 3390 552 HOH HOH . E 3 HOH A 103 3391 553 HOH HOH . E 3 HOH A 104 3392 554 HOH HOH . E 3 HOH A 105 3393 560 HOH HOH . E 3 HOH A 106 3394 561 HOH HOH . E 3 HOH A 107 3395 562 HOH HOH . E 3 HOH A 108 3396 565 HOH HOH . E 3 HOH A 109 3397 568 HOH HOH . E 3 HOH A 110 3398 573 HOH HOH . E 3 HOH A 111 3399 577 HOH HOH . E 3 HOH A 112 3400 581 HOH HOH . E 3 HOH A 113 3401 585 HOH HOH . E 3 HOH A 114 3402 586 HOH HOH . E 3 HOH A 115 3403 587 HOH HOH . E 3 HOH A 116 3404 588 HOH HOH . E 3 HOH A 117 3405 590 HOH HOH . E 3 HOH A 118 3406 591 HOH HOH . E 3 HOH A 119 3407 593 HOH HOH . E 3 HOH A 120 3408 598 HOH HOH . E 3 HOH A 121 3409 604 HOH HOH . E 3 HOH A 122 3410 606 HOH HOH . E 3 HOH A 123 3411 609 HOH HOH . E 3 HOH A 124 3412 612 HOH HOH . E 3 HOH A 125 3413 613 HOH HOH . E 3 HOH A 126 3414 614 HOH HOH . E 3 HOH A 127 3415 615 HOH HOH . E 3 HOH A 128 3416 618 HOH HOH . E 3 HOH A 129 3417 619 HOH HOH . E 3 HOH A 130 3418 620 HOH HOH . E 3 HOH A 131 3419 625 HOH HOH . E 3 HOH A 132 3420 636 HOH HOH . E 3 HOH A 133 3421 637 HOH HOH . E 3 HOH A 134 3422 641 HOH HOH . E 3 HOH A 135 3423 642 HOH HOH . E 3 HOH A 136 3424 643 HOH HOH . E 3 HOH A 137 3425 646 HOH HOH . E 3 HOH A 138 3426 648 HOH HOH . E 3 HOH A 139 3427 653 HOH HOH . E 3 HOH A 140 3428 655 HOH HOH . E 3 HOH A 141 3429 659 HOH HOH . E 3 HOH A 142 3430 660 HOH HOH . E 3 HOH A 143 3431 674 HOH HOH . E 3 HOH A 144 3432 678 HOH HOH . E 3 HOH A 145 3433 679 HOH HOH . E 3 HOH A 146 3434 681 HOH HOH . E 3 HOH A 147 3435 682 HOH HOH . E 3 HOH A 148 3436 685 HOH HOH . E 3 HOH A 149 3437 691 HOH HOH . E 3 HOH A 150 3438 695 HOH HOH . E 3 HOH A 151 3439 701 HOH HOH . E 3 HOH A 152 3440 702 HOH HOH . E 3 HOH A 153 3441 703 HOH HOH . E 3 HOH A 154 3442 706 HOH HOH . E 3 HOH A 155 3443 707 HOH HOH . E 3 HOH A 156 3444 709 HOH HOH . E 3 HOH A 157 3445 711 HOH HOH . F 3 HOH B 1 3288 301 HOH HOH . F 3 HOH B 2 3289 303 HOH HOH . F 3 HOH B 3 3290 306 HOH HOH . F 3 HOH B 4 3291 307 HOH HOH . F 3 HOH B 5 3292 308 HOH HOH . F 3 HOH B 6 3293 309 HOH HOH . F 3 HOH B 7 3294 313 HOH HOH . F 3 HOH B 8 3295 314 HOH HOH . F 3 HOH B 9 3296 317 HOH HOH . F 3 HOH B 10 3297 320 HOH HOH . F 3 HOH B 11 3298 323 HOH HOH . F 3 HOH B 12 3299 324 HOH HOH . F 3 HOH B 13 3300 327 HOH HOH . F 3 HOH B 14 3301 328 HOH HOH . F 3 HOH B 15 3302 331 HOH HOH . F 3 HOH B 16 3303 332 HOH HOH . F 3 HOH B 17 3304 334 HOH HOH . F 3 HOH B 18 3305 338 HOH HOH . F 3 HOH B 19 3306 340 HOH HOH . F 3 HOH B 20 3307 343 HOH HOH . F 3 HOH B 21 3308 345 HOH HOH . F 3 HOH B 22 3309 346 HOH HOH . F 3 HOH B 23 3310 348 HOH HOH . F 3 HOH B 24 3311 349 HOH HOH . F 3 HOH B 25 3312 352 HOH HOH . F 3 HOH B 26 3313 353 HOH HOH . F 3 HOH B 27 3314 354 HOH HOH . F 3 HOH B 28 3315 355 HOH HOH . F 3 HOH B 29 3316 360 HOH HOH . F 3 HOH B 30 3317 361 HOH HOH . F 3 HOH B 31 3318 363 HOH HOH . F 3 HOH B 32 3319 368 HOH HOH . F 3 HOH B 33 3320 370 HOH HOH . F 3 HOH B 34 3321 378 HOH HOH . F 3 HOH B 35 3322 385 HOH HOH . F 3 HOH B 36 3323 386 HOH HOH . F 3 HOH B 37 3324 388 HOH HOH . F 3 HOH B 38 3325 389 HOH HOH . F 3 HOH B 39 3326 391 HOH HOH . F 3 HOH B 40 3327 392 HOH HOH . F 3 HOH B 41 3328 393 HOH HOH . F 3 HOH B 42 3329 395 HOH HOH . F 3 HOH B 43 3330 396 HOH HOH . F 3 HOH B 44 3331 404 HOH HOH . F 3 HOH B 45 3332 407 HOH HOH . F 3 HOH B 46 3333 408 HOH HOH . F 3 HOH B 47 3334 411 HOH HOH . F 3 HOH B 48 3335 413 HOH HOH . F 3 HOH B 49 3336 416 HOH HOH . F 3 HOH B 50 3337 424 HOH HOH . F 3 HOH B 51 3338 425 HOH HOH . F 3 HOH B 52 3339 426 HOH HOH . F 3 HOH B 53 3340 433 HOH HOH . F 3 HOH B 54 3341 438 HOH HOH . F 3 HOH B 55 3342 439 HOH HOH . F 3 HOH B 56 3343 440 HOH HOH . F 3 HOH B 57 3344 441 HOH HOH . F 3 HOH B 58 3345 448 HOH HOH . F 3 HOH B 59 3346 461 HOH HOH . F 3 HOH B 60 3347 462 HOH HOH . F 3 HOH B 61 3348 465 HOH HOH . F 3 HOH B 62 3349 472 HOH HOH . F 3 HOH B 63 3350 478 HOH HOH . F 3 HOH B 64 3351 479 HOH HOH . F 3 HOH B 65 3352 483 HOH HOH . F 3 HOH B 66 3353 488 HOH HOH . F 3 HOH B 67 3354 491 HOH HOH . F 3 HOH B 68 3355 492 HOH HOH . F 3 HOH B 69 3356 493 HOH HOH . F 3 HOH B 70 3357 495 HOH HOH . F 3 HOH B 71 3358 497 HOH HOH . F 3 HOH B 72 3359 498 HOH HOH . F 3 HOH B 73 3360 506 HOH HOH . F 3 HOH B 74 3361 509 HOH HOH . F 3 HOH B 75 3362 514 HOH HOH . F 3 HOH B 76 3363 516 HOH HOH . F 3 HOH B 77 3364 517 HOH HOH . F 3 HOH B 78 3365 518 HOH HOH . F 3 HOH B 79 3366 521 HOH HOH . F 3 HOH B 80 3367 522 HOH HOH . F 3 HOH B 81 3368 523 HOH HOH . F 3 HOH B 82 3369 524 HOH HOH . F 3 HOH B 83 3370 527 HOH HOH . F 3 HOH B 84 3371 529 HOH HOH . F 3 HOH B 85 3372 538 HOH HOH . F 3 HOH B 86 3373 539 HOH HOH . F 3 HOH B 87 3374 540 HOH HOH . F 3 HOH B 88 3375 546 HOH HOH . F 3 HOH B 89 3376 547 HOH HOH . F 3 HOH B 90 3377 549 HOH HOH . F 3 HOH B 91 3378 550 HOH HOH . F 3 HOH B 92 3379 551 HOH HOH . F 3 HOH B 93 3380 555 HOH HOH . F 3 HOH B 94 3381 556 HOH HOH . F 3 HOH B 95 3382 557 HOH HOH . F 3 HOH B 96 3383 563 HOH HOH . F 3 HOH B 97 3384 566 HOH HOH . F 3 HOH B 98 3385 569 HOH HOH . F 3 HOH B 99 3386 574 HOH HOH . F 3 HOH B 100 3387 576 HOH HOH . F 3 HOH B 101 3388 578 HOH HOH . F 3 HOH B 102 3389 579 HOH HOH . F 3 HOH B 103 3390 580 HOH HOH . F 3 HOH B 104 3391 582 HOH HOH . F 3 HOH B 105 3392 584 HOH HOH . F 3 HOH B 106 3393 589 HOH HOH . F 3 HOH B 107 3394 594 HOH HOH . F 3 HOH B 108 3395 596 HOH HOH . F 3 HOH B 109 3396 600 HOH HOH . F 3 HOH B 110 3397 602 HOH HOH . F 3 HOH B 111 3398 607 HOH HOH . F 3 HOH B 112 3399 608 HOH HOH . F 3 HOH B 113 3400 611 HOH HOH . F 3 HOH B 114 3401 621 HOH HOH . F 3 HOH B 115 3402 622 HOH HOH . F 3 HOH B 116 3403 623 HOH HOH . F 3 HOH B 117 3404 624 HOH HOH . F 3 HOH B 118 3405 626 HOH HOH . F 3 HOH B 119 3406 628 HOH HOH . F 3 HOH B 120 3407 629 HOH HOH . F 3 HOH B 121 3408 632 HOH HOH . F 3 HOH B 122 3409 635 HOH HOH . F 3 HOH B 123 3410 638 HOH HOH . F 3 HOH B 124 3411 639 HOH HOH . F 3 HOH B 125 3412 640 HOH HOH . F 3 HOH B 126 3413 649 HOH HOH . F 3 HOH B 127 3414 650 HOH HOH . F 3 HOH B 128 3415 657 HOH HOH . F 3 HOH B 129 3416 661 HOH HOH . F 3 HOH B 130 3417 667 HOH HOH . F 3 HOH B 131 3418 673 HOH HOH . F 3 HOH B 132 3419 683 HOH HOH . F 3 HOH B 133 3420 686 HOH HOH . F 3 HOH B 134 3421 687 HOH HOH . F 3 HOH B 135 3422 688 HOH HOH . F 3 HOH B 136 3423 689 HOH HOH . F 3 HOH B 137 3424 692 HOH HOH . F 3 HOH B 138 3425 693 HOH HOH . F 3 HOH B 139 3426 694 HOH HOH . F 3 HOH B 140 3427 696 HOH HOH . F 3 HOH B 141 3428 697 HOH HOH . F 3 HOH B 142 3429 698 HOH HOH . F 3 HOH B 143 3430 699 HOH HOH . F 3 HOH B 144 3431 700 HOH HOH . F 3 HOH B 145 3432 704 HOH HOH . F 3 HOH B 146 3433 705 HOH HOH . F 3 HOH B 147 3434 708 HOH HOH . F 3 HOH B 148 3435 710 HOH HOH . F 3 HOH B 149 3436 712 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 2 57.64 70.956 -8.834 1 51.02 ? C1 GOL 3288 A 1 HETATM 2 O O1 GOL . . . C 2 57.247 69.718 -8.28 1 39.36 ? O1 GOL 3288 A 1 HETATM 3 C C2 GOL . . . C 2 57.548 70.883 -10.356 1 62.45 ? C2 GOL 3288 A 1 HETATM 4 O O2 GOL . . . C 2 56.195 70.877 -10.754 1 64.44 ? O2 GOL 3288 A 1 HETATM 5 C C3 GOL . . . C 2 58.243 72.078 -11 1 70.32 ? C3 GOL 3288 A 1 HETATM 6 O O3 GOL . . . C 2 58.445 71.83 -12.376 1 66.83 ? O3 GOL 3288 A 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 6 #