data_2I2A # _model_server_result.job_id '_tMuakigfCarLsq4x0K6uw' _model_server_result.datetime_utc '2025-02-28 00:58:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2i2a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 2I2A # _exptl.entry_id 2I2A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2I2A _cell.length_a 61.902 _cell.length_b 77.429 _cell.length_c 117.797 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2I2A _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 61.902 0 0 3 'crystal symmetry operation' 3_655 -x+1,y,-z -1 0 0 0 1 0 0 0 -1 61.902 0 0 4 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 2I2A _atom_sites.fract_transf_matrix[1][1] 0.016155 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012915 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008489 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAP A 1 273 201 NAP NAP . C 3 GOL A 1 301 301 GOL GOL . D 4 HOH A 1 302 1 HOH HOH . D 4 HOH A 2 303 2 HOH HOH . D 4 HOH A 3 304 3 HOH HOH . D 4 HOH A 4 305 4 HOH HOH . D 4 HOH A 5 306 5 HOH HOH . D 4 HOH A 6 307 6 HOH HOH . D 4 HOH A 7 308 7 HOH HOH . D 4 HOH A 8 309 8 HOH HOH . D 4 HOH A 9 310 9 HOH HOH . D 4 HOH A 10 311 10 HOH HOH . D 4 HOH A 11 312 11 HOH HOH . D 4 HOH A 12 313 12 HOH HOH . D 4 HOH A 13 314 13 HOH HOH . D 4 HOH A 14 315 14 HOH HOH . D 4 HOH A 15 316 16 HOH HOH . D 4 HOH A 16 317 17 HOH HOH . D 4 HOH A 17 318 18 HOH HOH . D 4 HOH A 18 319 19 HOH HOH . D 4 HOH A 19 320 20 HOH HOH . D 4 HOH A 20 321 21 HOH HOH . D 4 HOH A 21 322 22 HOH HOH . D 4 HOH A 22 323 23 HOH HOH . D 4 HOH A 23 324 24 HOH HOH . D 4 HOH A 24 325 25 HOH HOH . D 4 HOH A 25 326 26 HOH HOH . D 4 HOH A 26 327 27 HOH HOH . D 4 HOH A 27 328 28 HOH HOH . D 4 HOH A 28 329 29 HOH HOH . D 4 HOH A 29 330 30 HOH HOH . D 4 HOH A 30 331 31 HOH HOH . D 4 HOH A 31 332 32 HOH HOH . D 4 HOH A 32 333 33 HOH HOH . D 4 HOH A 33 334 34 HOH HOH . D 4 HOH A 34 335 35 HOH HOH . D 4 HOH A 35 336 36 HOH HOH . D 4 HOH A 36 337 37 HOH HOH . D 4 HOH A 37 338 38 HOH HOH . D 4 HOH A 38 339 39 HOH HOH . D 4 HOH A 39 340 40 HOH HOH . D 4 HOH A 40 341 41 HOH HOH . D 4 HOH A 41 342 42 HOH HOH . D 4 HOH A 42 343 43 HOH HOH . D 4 HOH A 43 344 44 HOH HOH . D 4 HOH A 44 345 45 HOH HOH . D 4 HOH A 45 346 46 HOH HOH . D 4 HOH A 46 347 47 HOH HOH . D 4 HOH A 47 348 48 HOH HOH . D 4 HOH A 48 349 49 HOH HOH . D 4 HOH A 49 350 50 HOH HOH . D 4 HOH A 50 351 51 HOH HOH . D 4 HOH A 51 352 52 HOH HOH . D 4 HOH A 52 353 53 HOH HOH . D 4 HOH A 53 354 54 HOH HOH . D 4 HOH A 54 355 55 HOH HOH . D 4 HOH A 55 356 56 HOH HOH . D 4 HOH A 56 357 57 HOH HOH . D 4 HOH A 57 358 58 HOH HOH . D 4 HOH A 58 359 59 HOH HOH . D 4 HOH A 59 360 60 HOH HOH . D 4 HOH A 60 361 61 HOH HOH . D 4 HOH A 61 362 62 HOH HOH . D 4 HOH A 62 363 63 HOH HOH . D 4 HOH A 63 364 64 HOH HOH . D 4 HOH A 64 365 65 HOH HOH . D 4 HOH A 65 366 66 HOH HOH . D 4 HOH A 66 367 67 HOH HOH . D 4 HOH A 67 368 68 HOH HOH . D 4 HOH A 68 369 69 HOH HOH . D 4 HOH A 69 370 70 HOH HOH . D 4 HOH A 70 371 71 HOH HOH . D 4 HOH A 71 372 72 HOH HOH . D 4 HOH A 72 373 73 HOH HOH . D 4 HOH A 73 374 74 HOH HOH . D 4 HOH A 74 375 75 HOH HOH . D 4 HOH A 75 376 76 HOH HOH . D 4 HOH A 76 377 77 HOH HOH . D 4 HOH A 77 378 78 HOH HOH . D 4 HOH A 78 379 79 HOH HOH . D 4 HOH A 79 380 80 HOH HOH . D 4 HOH A 80 381 81 HOH HOH . D 4 HOH A 81 382 82 HOH HOH . D 4 HOH A 82 383 83 HOH HOH . D 4 HOH A 83 384 84 HOH HOH . D 4 HOH A 84 385 85 HOH HOH . D 4 HOH A 85 386 86 HOH HOH . D 4 HOH A 86 387 87 HOH HOH . D 4 HOH A 87 388 88 HOH HOH . D 4 HOH A 88 389 89 HOH HOH . D 4 HOH A 89 390 90 HOH HOH . D 4 HOH A 90 391 91 HOH HOH . D 4 HOH A 91 392 92 HOH HOH . D 4 HOH A 92 393 93 HOH HOH . D 4 HOH A 93 394 94 HOH HOH . D 4 HOH A 94 395 95 HOH HOH . D 4 HOH A 95 396 96 HOH HOH . D 4 HOH A 96 397 97 HOH HOH . D 4 HOH A 97 398 98 HOH HOH . D 4 HOH A 98 399 99 HOH HOH . D 4 HOH A 99 400 100 HOH HOH . D 4 HOH A 100 401 101 HOH HOH . D 4 HOH A 101 402 102 HOH HOH . D 4 HOH A 102 403 103 HOH HOH . D 4 HOH A 103 404 104 HOH HOH . D 4 HOH A 104 405 105 HOH HOH . D 4 HOH A 105 406 106 HOH HOH . D 4 HOH A 106 407 107 HOH HOH . D 4 HOH A 107 408 108 HOH HOH . D 4 HOH A 108 409 109 HOH HOH . D 4 HOH A 109 410 110 HOH HOH . D 4 HOH A 110 411 111 HOH HOH . D 4 HOH A 111 412 112 HOH HOH . D 4 HOH A 112 413 113 HOH HOH . D 4 HOH A 113 414 114 HOH HOH . D 4 HOH A 114 415 115 HOH HOH . D 4 HOH A 115 416 116 HOH HOH . D 4 HOH A 116 417 117 HOH HOH . D 4 HOH A 117 418 118 HOH HOH . D 4 HOH A 118 419 119 HOH HOH . D 4 HOH A 119 420 120 HOH HOH . D 4 HOH A 120 421 121 HOH HOH . D 4 HOH A 121 422 122 HOH HOH . D 4 HOH A 122 423 123 HOH HOH . D 4 HOH A 123 424 124 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 32.747 26.092 13.576 1 23.71 ? C1 GOL 301 A 1 HETATM 2 O O1 GOL . . . C 3 33.394 26.201 12.307 1 23.81 ? O1 GOL 301 A 1 HETATM 3 C C2 GOL . . . C 3 31.585 25.092 13.532 1 23.55 ? C2 GOL 301 A 1 HETATM 4 O O2 GOL . . . C 3 30.401 25.61 14.108 1 24.47 ? O2 GOL 301 A 1 HETATM 5 C C3 GOL . . . C 3 31.93 23.873 14.353 1 23.81 ? C3 GOL 301 A 1 HETATM 6 O O3 GOL . . . C 3 31.041 22.884 13.9 1 22.04 ? O3 GOL 301 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 258 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #