data_2I2D # _model_server_result.job_id PVcDrPS41TfSduZ8Ew6ftw _model_server_result.datetime_utc '2024-11-13 19:03:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2i2d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":274}' # _entry.id 2I2D # _exptl.entry_id 2I2D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2I2D _cell.length_a 62.481 _cell.length_b 75.851 _cell.length_c 118.35 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2I2D _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 62.481 0 0 3 'crystal symmetry operation' 3_655 -x+1,y,-z -1 0 0 0 1 0 0 0 -1 62.481 0 0 4 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 146 n n C1 O2 CIT sing 147 n n C1 C2 CIT sing 148 n n O2 HO2 CIT sing 149 n n C2 C3 CIT sing 150 n n C2 H21 CIT sing 151 n n C2 H22 CIT sing 152 n n C3 O7 CIT sing 153 n n C3 C4 CIT sing 154 n n C3 C6 CIT sing 155 n n O7 HO7 CIT sing 156 n n C4 C5 CIT sing 157 n n C4 H41 CIT sing 158 n n C4 H42 CIT sing 159 n n C5 O3 CIT doub 160 n n C5 O4 CIT sing 161 n n O4 HO4 CIT sing 162 n n C6 O5 CIT doub 163 n n C6 O6 CIT sing 164 n n O6 HO6 CIT sing 165 n n # _atom_sites.entry_id 2I2D _atom_sites.fract_transf_matrix[1][1] 0.016005 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013184 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00845 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A2D A 1 273 101 A2D A2D . C 3 CIT A 1 274 201 CIT CIT . D 4 HOH A 1 275 1 HOH HOH . D 4 HOH A 2 276 2 HOH HOH . D 4 HOH A 3 277 3 HOH HOH . D 4 HOH A 4 278 4 HOH HOH . D 4 HOH A 5 279 5 HOH HOH . D 4 HOH A 6 280 6 HOH HOH . D 4 HOH A 7 281 7 HOH HOH . D 4 HOH A 8 282 8 HOH HOH . D 4 HOH A 9 283 9 HOH HOH . D 4 HOH A 10 284 10 HOH HOH . D 4 HOH A 11 285 11 HOH HOH . D 4 HOH A 12 286 12 HOH HOH . D 4 HOH A 13 287 13 HOH HOH . D 4 HOH A 14 288 14 HOH HOH . D 4 HOH A 15 289 15 HOH HOH . D 4 HOH A 16 290 16 HOH HOH . D 4 HOH A 17 291 17 HOH HOH . D 4 HOH A 18 292 18 HOH HOH . D 4 HOH A 19 293 19 HOH HOH . D 4 HOH A 20 294 20 HOH HOH . D 4 HOH A 21 295 21 HOH HOH . D 4 HOH A 22 296 22 HOH HOH . D 4 HOH A 23 297 23 HOH HOH . D 4 HOH A 24 298 24 HOH HOH . D 4 HOH A 25 299 25 HOH HOH . D 4 HOH A 26 300 26 HOH HOH . D 4 HOH A 27 301 27 HOH HOH . D 4 HOH A 28 302 28 HOH HOH . D 4 HOH A 29 303 29 HOH HOH . D 4 HOH A 30 304 30 HOH HOH . D 4 HOH A 31 305 31 HOH HOH . D 4 HOH A 32 306 32 HOH HOH . D 4 HOH A 33 307 33 HOH HOH . D 4 HOH A 34 308 34 HOH HOH . D 4 HOH A 35 309 35 HOH HOH . D 4 HOH A 36 310 36 HOH HOH . D 4 HOH A 37 311 37 HOH HOH . D 4 HOH A 38 312 38 HOH HOH . D 4 HOH A 39 313 39 HOH HOH . D 4 HOH A 40 314 40 HOH HOH . D 4 HOH A 41 315 41 HOH HOH . D 4 HOH A 42 316 42 HOH HOH . D 4 HOH A 43 317 43 HOH HOH . D 4 HOH A 44 318 44 HOH HOH . D 4 HOH A 45 319 45 HOH HOH . D 4 HOH A 46 320 46 HOH HOH . D 4 HOH A 47 321 47 HOH HOH . D 4 HOH A 48 322 48 HOH HOH . D 4 HOH A 49 323 49 HOH HOH . D 4 HOH A 50 324 50 HOH HOH . D 4 HOH A 51 325 51 HOH HOH . D 4 HOH A 52 326 52 HOH HOH . D 4 HOH A 53 327 53 HOH HOH . D 4 HOH A 54 328 54 HOH HOH . D 4 HOH A 55 329 55 HOH HOH . D 4 HOH A 56 330 56 HOH HOH . D 4 HOH A 57 331 57 HOH HOH . D 4 HOH A 58 332 58 HOH HOH . D 4 HOH A 59 333 59 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . C 3 31.507 23.118 14.064 1 37.21 ? C1 CIT 274 A 1 HETATM 2 O O1 CIT . . . C 3 32.603 22.731 13.622 1 38.78 ? O1 CIT 274 A 1 HETATM 3 O O2 CIT . . . C 3 30.758 22.21 14.395 1 39.76 ? O2 CIT 274 A 1 HETATM 4 C C2 CIT . . . C 3 31.079 24.568 14.224 1 38.17 ? C2 CIT 274 A 1 HETATM 5 C C3 CIT . . . C 3 29.539 24.82 14.166 1 38.2 ? C3 CIT 274 A 1 HETATM 6 O O7 CIT . . . C 3 29.273 25.512 12.904 1 38.9 ? O7 CIT 274 A 1 HETATM 7 C C4 CIT . . . C 3 29.045 25.624 15.379 1 37.88 ? C4 CIT 274 A 1 HETATM 8 C C5 CIT . . . C 3 29.385 27.104 15.367 1 37.95 ? C5 CIT 274 A 1 HETATM 9 O O3 CIT . . . C 3 29.398 27.739 16.457 1 36.87 ? O3 CIT 274 A 1 HETATM 10 O O4 CIT . . . C 3 29.642 27.723 14.305 1 37.91 ? O4 CIT 274 A 1 HETATM 11 C C6 CIT . . . C 3 28.626 23.586 14.163 1 37.2 ? C6 CIT 274 A 1 HETATM 12 O O5 CIT . . . C 3 28.033 23.252 13.123 1 36.21 ? O5 CIT 274 A 1 HETATM 13 O O6 CIT . . . C 3 28.421 22.9 15.194 1 37.4 ? O6 CIT 274 A 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 232 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 13 #