data_2I3I
#
_model_server_result.job_id            bUZo310E9IyUa5km53igrg 
_model_server_result.datetime_utc      '2024-12-21 12:12:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2i3i 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":202}' 
#
_entry.id    2I3I 
#
_exptl.entry_id    2I3I 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2I3I 
_cell.length_a            87.356 
_cell.length_b            87.356 
_cell.length_c            73.196 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2I3I 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,K 1 1 
B,E,F,G,H,I,J,L 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 I N N 
? 6 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 85 A CYS 124 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? 
metalc ? metalc2 A SG CYS 88 A CYS 127 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? 
metalc ? metalc3 A NE2 HIS 105 A HIS 144 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? 
metalc ? metalc4 A SG CYS 112 A CYS 151 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? 
metalc ? metalc5 B O SER 54 B SER 93 1_555 F LI LI . B LI 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.857 ? 
metalc ? metalc6 B OD1 ASP 57 B ASP 96 1_555 F LI LI . B LI 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.805 ? 
metalc ? metalc7 B ND1 HIS 76 B HIS 115 1_555 F LI LI . B LI 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.913 ? 
metalc ? metalc8 B SG CYS 85 B CYS 124 1_555 E ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? 
metalc ? metalc9 B SG CYS 88 B CYS 127 1_555 E ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? 
metalc ? metalc10 B NE2 HIS 105 B HIS 144 1_555 E ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? 
metalc ? metalc11 B SG CYS 112 B CYS 151 1_555 E ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? 
metalc ? metalc12 I O2 EDO . B EDO 201 1_555 F LI LI . B LI 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.815 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 185 n n 
C1 C2 EDO sing 186 n n 
C1 H11 EDO sing 187 n n 
C1 H12 EDO sing 188 n n 
O1 HO1 EDO sing 189 n n 
C2 O2 EDO sing 190 n n 
C2 H21 EDO sing 191 n n 
C2 H22 EDO sing 192 n n 
O2 HO2 EDO sing 193 n n 
#
_atom_sites.entry_id                     2I3I 
_atom_sites.fract_transf_matrix[1][1]    0.011447 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011447 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013662 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN A 1 1001 1001 ZN ZN . 
D 3 618 A 1 501 501 618 618 . 
E 2 ZN B 1 1001 1001 ZN ZN . 
F 4 LI B 1 1002 1002 LI LI . 
G 3 618 B 1 501 501 618 618 . 
H 5 BTB B 1 301 301 BTB BTB . 
I 6 EDO B 1 201 201 EDO EDO . 
J 6 EDO B 1 202 202 EDO EDO . 
K 7 HOH A 1 1002 1 HOH HOH . 
K 7 HOH A 2 1003 3 HOH HOH . 
K 7 HOH A 3 1004 5 HOH HOH . 
K 7 HOH A 4 1005 6 HOH HOH . 
K 7 HOH A 5 1006 8 HOH HOH . 
K 7 HOH A 6 1007 10 HOH HOH . 
K 7 HOH A 7 1008 12 HOH HOH . 
K 7 HOH A 8 1009 14 HOH HOH . 
K 7 HOH A 9 1010 15 HOH HOH . 
K 7 HOH A 10 1011 16 HOH HOH . 
K 7 HOH A 11 1012 17 HOH HOH . 
K 7 HOH A 12 1013 18 HOH HOH . 
K 7 HOH A 13 1014 19 HOH HOH . 
K 7 HOH A 14 1015 20 HOH HOH . 
K 7 HOH A 15 1016 21 HOH HOH . 
K 7 HOH A 16 1017 22 HOH HOH . 
K 7 HOH A 17 1018 25 HOH HOH . 
K 7 HOH A 18 1019 28 HOH HOH . 
K 7 HOH A 19 1020 29 HOH HOH . 
K 7 HOH A 20 1021 33 HOH HOH . 
K 7 HOH A 21 1022 35 HOH HOH . 
K 7 HOH A 22 1023 36 HOH HOH . 
K 7 HOH A 23 1024 37 HOH HOH . 
K 7 HOH A 24 1025 40 HOH HOH . 
K 7 HOH A 25 1026 43 HOH HOH . 
K 7 HOH A 26 1027 44 HOH HOH . 
K 7 HOH A 27 1028 45 HOH HOH . 
K 7 HOH A 28 1029 46 HOH HOH . 
K 7 HOH A 29 1030 47 HOH HOH . 
K 7 HOH A 30 1031 48 HOH HOH . 
K 7 HOH A 31 1032 49 HOH HOH . 
K 7 HOH A 32 1033 50 HOH HOH . 
K 7 HOH A 33 1034 51 HOH HOH . 
K 7 HOH A 34 1035 52 HOH HOH . 
K 7 HOH A 35 1036 54 HOH HOH . 
K 7 HOH A 36 1037 59 HOH HOH . 
K 7 HOH A 37 1038 62 HOH HOH . 
K 7 HOH A 38 1039 70 HOH HOH . 
K 7 HOH A 39 1040 77 HOH HOH . 
K 7 HOH A 40 1041 78 HOH HOH . 
K 7 HOH A 41 1042 82 HOH HOH . 
K 7 HOH A 42 1043 84 HOH HOH . 
K 7 HOH A 43 1044 89 HOH HOH . 
K 7 HOH A 44 1045 90 HOH HOH . 
K 7 HOH A 45 1046 92 HOH HOH . 
K 7 HOH A 46 1047 93 HOH HOH . 
K 7 HOH A 47 1048 95 HOH HOH . 
K 7 HOH A 48 1049 97 HOH HOH . 
K 7 HOH A 49 1050 99 HOH HOH . 
K 7 HOH A 50 1051 100 HOH HOH . 
K 7 HOH A 51 1052 101 HOH HOH . 
K 7 HOH A 52 1053 102 HOH HOH . 
K 7 HOH A 53 1054 103 HOH HOH . 
K 7 HOH A 54 1055 104 HOH HOH . 
K 7 HOH A 55 1056 105 HOH HOH . 
K 7 HOH A 56 1057 106 HOH HOH . 
K 7 HOH A 57 1058 107 HOH HOH . 
K 7 HOH A 58 1059 110 HOH HOH . 
K 7 HOH A 59 1060 113 HOH HOH . 
K 7 HOH A 60 1061 116 HOH HOH . 
K 7 HOH A 61 1062 117 HOH HOH . 
K 7 HOH A 62 1063 119 HOH HOH . 
K 7 HOH A 63 1064 120 HOH HOH . 
K 7 HOH A 64 1065 121 HOH HOH . 
K 7 HOH A 65 1066 124 HOH HOH . 
K 7 HOH A 66 1067 125 HOH HOH . 
K 7 HOH A 67 1068 126 HOH HOH . 
K 7 HOH A 68 1069 127 HOH HOH . 
K 7 HOH A 69 1070 131 HOH HOH . 
K 7 HOH A 70 1071 132 HOH HOH . 
L 7 HOH B 1 1003 2 HOH HOH . 
L 7 HOH B 2 1004 4 HOH HOH . 
L 7 HOH B 3 1005 7 HOH HOH . 
L 7 HOH B 4 1006 9 HOH HOH . 
L 7 HOH B 5 1007 11 HOH HOH . 
L 7 HOH B 6 1008 13 HOH HOH . 
L 7 HOH B 7 1009 23 HOH HOH . 
L 7 HOH B 8 1010 24 HOH HOH . 
L 7 HOH B 9 1011 26 HOH HOH . 
L 7 HOH B 10 1012 27 HOH HOH . 
L 7 HOH B 11 1013 30 HOH HOH . 
L 7 HOH B 12 1014 31 HOH HOH . 
L 7 HOH B 13 1015 32 HOH HOH . 
L 7 HOH B 14 1016 34 HOH HOH . 
L 7 HOH B 15 1017 38 HOH HOH . 
L 7 HOH B 16 1018 39 HOH HOH . 
L 7 HOH B 17 1019 41 HOH HOH . 
L 7 HOH B 18 1020 42 HOH HOH . 
L 7 HOH B 19 1021 53 HOH HOH . 
L 7 HOH B 20 1022 55 HOH HOH . 
L 7 HOH B 21 1023 56 HOH HOH . 
L 7 HOH B 22 1024 57 HOH HOH . 
L 7 HOH B 23 1025 58 HOH HOH . 
L 7 HOH B 24 1026 60 HOH HOH . 
L 7 HOH B 25 1027 61 HOH HOH . 
L 7 HOH B 26 1028 63 HOH HOH . 
L 7 HOH B 27 1029 64 HOH HOH . 
L 7 HOH B 28 1030 65 HOH HOH . 
L 7 HOH B 29 1031 66 HOH HOH . 
L 7 HOH B 30 1032 67 HOH HOH . 
L 7 HOH B 31 1033 68 HOH HOH . 
L 7 HOH B 32 1034 69 HOH HOH . 
L 7 HOH B 33 1035 71 HOH HOH . 
L 7 HOH B 34 1036 72 HOH HOH . 
L 7 HOH B 35 1037 73 HOH HOH . 
L 7 HOH B 36 1038 74 HOH HOH . 
L 7 HOH B 37 1039 75 HOH HOH . 
L 7 HOH B 38 1040 76 HOH HOH . 
L 7 HOH B 39 1041 79 HOH HOH . 
L 7 HOH B 40 1042 80 HOH HOH . 
L 7 HOH B 41 1043 81 HOH HOH . 
L 7 HOH B 42 1044 83 HOH HOH . 
L 7 HOH B 43 1045 85 HOH HOH . 
L 7 HOH B 44 1046 86 HOH HOH . 
L 7 HOH B 45 1047 87 HOH HOH . 
L 7 HOH B 46 1048 88 HOH HOH . 
L 7 HOH B 47 1049 91 HOH HOH . 
L 7 HOH B 48 1050 94 HOH HOH . 
L 7 HOH B 49 1051 96 HOH HOH . 
L 7 HOH B 50 1052 98 HOH HOH . 
L 7 HOH B 51 1053 108 HOH HOH . 
L 7 HOH B 52 1054 109 HOH HOH . 
L 7 HOH B 53 1055 111 HOH HOH . 
L 7 HOH B 54 1056 112 HOH HOH . 
L 7 HOH B 55 1057 114 HOH HOH . 
L 7 HOH B 56 1058 115 HOH HOH . 
L 7 HOH B 57 1059 118 HOH HOH . 
L 7 HOH B 58 1060 122 HOH HOH . 
L 7 HOH B 59 1061 123 HOH HOH . 
L 7 HOH B 60 1062 128 HOH HOH . 
L 7 HOH B 61 1063 129 HOH HOH . 
L 7 HOH B 62 1064 130 HOH HOH . 
L 7 HOH B 63 1065 133 HOH HOH . 
L 7 HOH B 64 1066 134 HOH HOH . 
L 7 HOH B 65 1067 135 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . J 6 78.663 47.408 51 1 2 ? C1 EDO 202 B 1 
HETATM 2 O O1 EDO . . . J 6 78.918 47.694 52.385 1 2 ? O1 EDO 202 B 1 
HETATM 3 C C2 EDO . . . J 6 79.938 47.644 50.209 1 2 ? C2 EDO 202 B 1 
HETATM 4 O O2 EDO . . . J 6 79.855 48.959 49.642 1 2 ? O2 EDO 202 B 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    24 
_model_server_stats.query_time_ms           346 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           4 
#