data_2I55 # _model_server_result.job_id xL6_6MglDqpINqWM0zST0A _model_server_result.datetime_utc '2024-11-08 09:53:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2i55 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":2004}' # _entry.id 2I55 # _exptl.entry_id 2I55 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2I55 _cell.length_a 92.224 _cell.length_b 92.224 _cell.length_c 172.824 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2I55 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,M 1 1,2 B,C,F,G,H,I,J,K,L,N,O 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 x-y,-y,-z+2/3 1 0 0 0 -1 0 0 0 -1 0 0 115.216 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 G N N ? 3 H N N ? 3 K N N ? 3 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 10 A ASP 10 1_555 E MG MG . A MG 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? metalc ? metalc2 A OD1 ASP 207 A ASP 207 1_555 E MG MG . A MG 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.042 ? metalc ? metalc3 A OD2 ASP 207 A ASP 207 1_555 E MG MG . A MG 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc4 B OD2 ASP 10 B ASP 10 1_555 G MG MG . B MG 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.589 ? metalc ? metalc5 B OD2 ASP 207 B ASP 207 1_555 G MG MG . B MG 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.855 ? metalc ? metalc6 B O PHE 219 B PHE 219 1_555 H MG MG . B MG 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc7 B O ASP 221 B ASP 221 1_555 H MG MG . B MG 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc8 B O THR 224 B THR 224 1_555 H MG MG . B MG 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.672 ? metalc ? metalc9 H MG MG . B MG 2004 1_555 C OD1 ASN 145 C ASN 145 4_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.606 ? metalc ? metalc10 C OD2 ASP 10 C ASP 10 1_555 K MG MG . C MG 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc11 C OD2 ASP 207 C ASP 207 1_555 K MG MG . C MG 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? metalc ? metalc12 C O PHE 219 C PHE 219 1_555 L MG MG . C MG 2005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc13 C O ASP 221 C ASP 221 1_555 L MG MG . C MG 2005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc14 C O THR 224 C THR 224 1_555 L MG MG . C MG 2005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.091 ? metalc ? metalc15 C OG1 THR 224 C THR 224 1_555 L MG MG . C MG 2005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.588 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2I55 _atom_sites.fract_transf_matrix[1][1] 0.010843 _atom_sites.fract_transf_matrix[1][2] 0.00626 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012521 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005786 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 CL A 1 1001 1 CL CL . E 3 MG A 1 2002 2 MG MG . F 4 B16 B 1 249 249 B16 G16 . G 3 MG B 1 2001 1 MG MG . H 3 MG B 1 2004 4 MG MG . I 4 B16 C 1 1249 249 B16 G16 . J 2 CL C 1 1002 2 CL CL . K 3 MG C 1 2003 3 MG MG . L 3 MG C 1 2005 5 MG MG . M 5 HOH A 1 2003 3 HOH HOH . M 5 HOH A 2 2004 4 HOH HOH . M 5 HOH A 3 2005 18 HOH HOH . N 5 HOH B 1 2005 1 HOH HOH . N 5 HOH B 2 2006 2 HOH HOH . N 5 HOH B 3 2007 5 HOH HOH . N 5 HOH B 4 2008 8 HOH HOH . N 5 HOH B 5 2009 10 HOH HOH . N 5 HOH B 6 2010 15 HOH HOH . N 5 HOH B 7 2011 16 HOH HOH . N 5 HOH B 8 2012 17 HOH HOH . O 5 HOH C 1 2006 6 HOH HOH . O 5 HOH C 2 2007 7 HOH HOH . O 5 HOH C 3 2008 9 HOH HOH . O 5 HOH C 4 2009 11 HOH HOH . O 5 HOH C 5 2010 12 HOH HOH . O 5 HOH C 6 2011 13 HOH HOH . O 5 HOH C 7 2012 14 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 3 _atom_site.Cartn_x 65.272 _atom_site.Cartn_y 11.092 _atom_site.Cartn_z -7.273 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 55.38 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 2004 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #