data_2I5E # _model_server_result.job_id UqkcGMbjVtdXagXSpFonDQ _model_server_result.datetime_utc '2025-03-04 17:27:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2i5e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":305}' # _entry.id 2I5E # _exptl.entry_id 2I5E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.15 _cell.angle_gamma 90 _cell.entry_id 2I5E _cell.length_a 43.797 _cell.length_b 100.482 _cell.length_c 54.877 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2I5E _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ALA 3 A ALA 0 1_555 A N MSE 4 A MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale2 A C MSE 4 A MSE 1 1_555 A N ARG 5 A ARG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale3 A C LEU 34 A LEU 31 1_555 A N MSE 35 A MSE 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale4 A C MSE 35 A MSE 32 1_555 A N LEU 36 A LEU 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? covale ? covale5 A C GLU 63 A GLU 60 1_555 A N MSE 64 A MSE 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale6 A C MSE 64 A MSE 61 1_555 A N THR 65 A THR 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale7 A C VAL 94 A VAL 91 1_555 A N MSE 95 A MSE 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale8 A C MSE 95 A MSE 92 1_555 A N ALA 96 A ALA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? covale ? covale9 A C PHE 166 A PHE 163 1_555 A N MSE 167 A MSE 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale10 A C MSE 167 A MSE 164 1_555 A N ALA 168 A ALA 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale11 B C ALA 3 B ALA 0 1_555 B N MSE 4 B MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale12 B C MSE 4 B MSE 1 1_555 B N ARG 5 B ARG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale13 B C LEU 34 B LEU 31 1_555 B N MSE 35 B MSE 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale14 B C MSE 35 B MSE 32 1_555 B N LEU 36 B LEU 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale15 B C GLU 63 B GLU 60 1_555 B N MSE 64 B MSE 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale16 B C MSE 64 B MSE 61 1_555 B N THR 65 B THR 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale17 B C VAL 94 B VAL 91 1_555 B N MSE 95 B MSE 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale18 B C MSE 95 B MSE 92 1_555 B N ALA 96 B ALA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale19 B C PHE 166 B PHE 163 1_555 B N MSE 167 B MSE 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale20 B C MSE 167 B MSE 164 1_555 B N ALA 168 B ALA 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 256 n n C1 C2 PEG sing 257 n n C1 H11 PEG sing 258 n n C1 H12 PEG sing 259 n n O1 HO1 PEG sing 260 n n C2 O2 PEG sing 261 n n C2 H21 PEG sing 262 n n C2 H22 PEG sing 263 n n O2 C3 PEG sing 264 n n C3 C4 PEG sing 265 n n C3 H31 PEG sing 266 n n C3 H32 PEG sing 267 n n C4 O4 PEG sing 268 n n C4 H41 PEG sing 269 n n C4 H42 PEG sing 270 n n O4 HO4 PEG sing 271 n n # _atom_sites.entry_id 2I5E _atom_sites.fract_transf_matrix[1][1] 0.022833 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006611 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009952 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018971 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 TRS A 1 302 2 TRS TRS . D 2 TRS A 1 304 4 TRS TRS . E 3 PEG A 1 305 1 PEG PEG . F 3 PEG A 1 306 2 PEG PEG . G 3 PEG A 1 307 3 PEG PEG . H 2 TRS B 1 301 1 TRS TRS . I 2 TRS B 1 303 3 TRS TRS . J 2 TRS B 1 305 5 TRS TRS . K 4 HOH A 1 308 1 HOH HOH . K 4 HOH A 2 309 2 HOH HOH . K 4 HOH A 3 310 5 HOH HOH . K 4 HOH A 4 311 6 HOH HOH . K 4 HOH A 5 312 9 HOH HOH . K 4 HOH A 6 313 13 HOH HOH . K 4 HOH A 7 314 14 HOH HOH . K 4 HOH A 8 315 17 HOH HOH . K 4 HOH A 9 316 20 HOH HOH . K 4 HOH A 10 317 23 HOH HOH . K 4 HOH A 11 318 24 HOH HOH . K 4 HOH A 12 319 28 HOH HOH . K 4 HOH A 13 320 31 HOH HOH . K 4 HOH A 14 321 32 HOH HOH . K 4 HOH A 15 322 33 HOH HOH . K 4 HOH A 16 323 34 HOH HOH . K 4 HOH A 17 324 36 HOH HOH . K 4 HOH A 18 325 37 HOH HOH . K 4 HOH A 19 326 39 HOH HOH . K 4 HOH A 20 327 40 HOH HOH . K 4 HOH A 21 328 42 HOH HOH . K 4 HOH A 22 329 45 HOH HOH . K 4 HOH A 23 330 46 HOH HOH . K 4 HOH A 24 331 49 HOH HOH . K 4 HOH A 25 332 51 HOH HOH . K 4 HOH A 26 333 52 HOH HOH . K 4 HOH A 27 334 56 HOH HOH . K 4 HOH A 28 335 57 HOH HOH . K 4 HOH A 29 336 60 HOH HOH . K 4 HOH A 30 337 61 HOH HOH . K 4 HOH A 31 338 63 HOH HOH . K 4 HOH A 32 339 65 HOH HOH . K 4 HOH A 33 340 69 HOH HOH . K 4 HOH A 34 341 70 HOH HOH . K 4 HOH A 35 342 73 HOH HOH . K 4 HOH A 36 343 74 HOH HOH . K 4 HOH A 37 344 76 HOH HOH . K 4 HOH A 38 345 77 HOH HOH . K 4 HOH A 39 346 78 HOH HOH . K 4 HOH A 40 347 79 HOH HOH . K 4 HOH A 41 348 80 HOH HOH . K 4 HOH A 42 349 81 HOH HOH . K 4 HOH A 43 350 85 HOH HOH . K 4 HOH A 44 351 86 HOH HOH . K 4 HOH A 45 352 90 HOH HOH . K 4 HOH A 46 353 91 HOH HOH . K 4 HOH A 47 354 94 HOH HOH . K 4 HOH A 48 355 95 HOH HOH . K 4 HOH A 49 356 96 HOH HOH . K 4 HOH A 50 357 100 HOH HOH . K 4 HOH A 51 358 101 HOH HOH . K 4 HOH A 52 359 103 HOH HOH . K 4 HOH A 53 360 105 HOH HOH . K 4 HOH A 54 361 106 HOH HOH . K 4 HOH A 55 362 107 HOH HOH . K 4 HOH A 56 363 109 HOH HOH . K 4 HOH A 57 364 119 HOH HOH . K 4 HOH A 58 365 122 HOH HOH . K 4 HOH A 59 366 123 HOH HOH . K 4 HOH A 60 367 124 HOH HOH . K 4 HOH A 61 368 125 HOH HOH . K 4 HOH A 62 369 128 HOH HOH . K 4 HOH A 63 370 129 HOH HOH . K 4 HOH A 64 371 133 HOH HOH . K 4 HOH A 65 372 134 HOH HOH . K 4 HOH A 66 373 138 HOH HOH . K 4 HOH A 67 374 140 HOH HOH . K 4 HOH A 68 375 146 HOH HOH . K 4 HOH A 69 376 148 HOH HOH . K 4 HOH A 70 377 149 HOH HOH . K 4 HOH A 71 378 151 HOH HOH . K 4 HOH A 72 379 152 HOH HOH . K 4 HOH A 73 380 153 HOH HOH . K 4 HOH A 74 381 154 HOH HOH . K 4 HOH A 75 382 155 HOH HOH . K 4 HOH A 76 383 161 HOH HOH . K 4 HOH A 77 384 162 HOH HOH . K 4 HOH A 78 385 164 HOH HOH . K 4 HOH A 79 386 165 HOH HOH . K 4 HOH A 80 387 169 HOH HOH . K 4 HOH A 81 388 170 HOH HOH . K 4 HOH A 82 389 171 HOH HOH . K 4 HOH A 83 390 172 HOH HOH . K 4 HOH A 84 391 173 HOH HOH . L 4 HOH B 1 306 3 HOH HOH . L 4 HOH B 2 307 4 HOH HOH . L 4 HOH B 3 308 7 HOH HOH . L 4 HOH B 4 309 8 HOH HOH . L 4 HOH B 5 310 10 HOH HOH . L 4 HOH B 6 311 11 HOH HOH . L 4 HOH B 7 312 12 HOH HOH . L 4 HOH B 8 313 15 HOH HOH . L 4 HOH B 9 314 16 HOH HOH . L 4 HOH B 10 315 18 HOH HOH . L 4 HOH B 11 316 19 HOH HOH . L 4 HOH B 12 317 21 HOH HOH . L 4 HOH B 13 318 22 HOH HOH . L 4 HOH B 14 319 25 HOH HOH . L 4 HOH B 15 320 26 HOH HOH . L 4 HOH B 16 321 27 HOH HOH . L 4 HOH B 17 322 29 HOH HOH . L 4 HOH B 18 323 30 HOH HOH . L 4 HOH B 19 324 35 HOH HOH . L 4 HOH B 20 325 38 HOH HOH . L 4 HOH B 21 326 41 HOH HOH . L 4 HOH B 22 327 43 HOH HOH . L 4 HOH B 23 328 44 HOH HOH . L 4 HOH B 24 329 47 HOH HOH . L 4 HOH B 25 330 48 HOH HOH . L 4 HOH B 26 331 50 HOH HOH . L 4 HOH B 27 332 53 HOH HOH . L 4 HOH B 28 333 54 HOH HOH . L 4 HOH B 29 334 55 HOH HOH . L 4 HOH B 30 335 58 HOH HOH . L 4 HOH B 31 336 59 HOH HOH . L 4 HOH B 32 337 62 HOH HOH . L 4 HOH B 33 338 64 HOH HOH . L 4 HOH B 34 339 66 HOH HOH . L 4 HOH B 35 340 67 HOH HOH . L 4 HOH B 36 341 68 HOH HOH . L 4 HOH B 37 342 71 HOH HOH . L 4 HOH B 38 343 72 HOH HOH . L 4 HOH B 39 344 75 HOH HOH . L 4 HOH B 40 345 82 HOH HOH . L 4 HOH B 41 346 83 HOH HOH . L 4 HOH B 42 347 84 HOH HOH . L 4 HOH B 43 348 87 HOH HOH . L 4 HOH B 44 349 88 HOH HOH . L 4 HOH B 45 350 89 HOH HOH . L 4 HOH B 46 351 92 HOH HOH . L 4 HOH B 47 352 93 HOH HOH . L 4 HOH B 48 353 97 HOH HOH . L 4 HOH B 49 354 98 HOH HOH . L 4 HOH B 50 355 99 HOH HOH . L 4 HOH B 51 356 102 HOH HOH . L 4 HOH B 52 357 104 HOH HOH . L 4 HOH B 53 358 108 HOH HOH . L 4 HOH B 54 359 110 HOH HOH . L 4 HOH B 55 360 111 HOH HOH . L 4 HOH B 56 361 112 HOH HOH . L 4 HOH B 57 362 113 HOH HOH . L 4 HOH B 58 363 114 HOH HOH . L 4 HOH B 59 364 115 HOH HOH . L 4 HOH B 60 365 116 HOH HOH . L 4 HOH B 61 366 117 HOH HOH . L 4 HOH B 62 367 118 HOH HOH . L 4 HOH B 63 368 120 HOH HOH . L 4 HOH B 64 369 121 HOH HOH . L 4 HOH B 65 370 126 HOH HOH . L 4 HOH B 66 371 127 HOH HOH . L 4 HOH B 67 372 130 HOH HOH . L 4 HOH B 68 373 131 HOH HOH . L 4 HOH B 69 374 132 HOH HOH . L 4 HOH B 70 375 135 HOH HOH . L 4 HOH B 71 376 136 HOH HOH . L 4 HOH B 72 377 137 HOH HOH . L 4 HOH B 73 378 139 HOH HOH . L 4 HOH B 74 379 141 HOH HOH . L 4 HOH B 75 380 142 HOH HOH . L 4 HOH B 76 381 143 HOH HOH . L 4 HOH B 77 382 144 HOH HOH . L 4 HOH B 78 383 145 HOH HOH . L 4 HOH B 79 384 147 HOH HOH . L 4 HOH B 80 385 150 HOH HOH . L 4 HOH B 81 386 156 HOH HOH . L 4 HOH B 82 387 157 HOH HOH . L 4 HOH B 83 388 158 HOH HOH . L 4 HOH B 84 389 159 HOH HOH . L 4 HOH B 85 390 160 HOH HOH . L 4 HOH B 86 391 163 HOH HOH . L 4 HOH B 87 392 166 HOH HOH . L 4 HOH B 88 393 167 HOH HOH . L 4 HOH B 89 394 168 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . E 3 17.175 18.124 8.481 1 46.12 ? C1 PEG 305 A 1 HETATM 2 O O1 PEG . . . E 3 18.177 19.1 8.128 1 53.93 ? O1 PEG 305 A 1 HETATM 3 C C2 PEG . . . E 3 16.001 18.12 7.49 1 53.7 ? C2 PEG 305 A 1 HETATM 4 O O2 PEG . . . E 3 15.779 16.77 7.019 1 54.38 ? O2 PEG 305 A 1 HETATM 5 C C3 PEG . . . E 3 16.22 16.626 5.647 1 57.2 ? C3 PEG 305 A 1 HETATM 6 C C4 PEG . . . E 3 15.675 15.324 5.066 1 52.26 ? C4 PEG 305 A 1 HETATM 7 O O4 PEG . . . E 3 14.271 15.389 4.855 1 48.03 ? O4 PEG 305 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 40 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 1491 _model_server_stats.encode_time_ms 23 _model_server_stats.element_count 7 #