data_2I5M # _model_server_result.job_id gl6L93zJqvIy7wWautWDWw _model_server_result.datetime_utc '2024-11-24 15:49:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2i5m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":68}' # _entry.id 2I5M # _exptl.entry_id 2I5M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2I5M _cell.length_a 58.627 _cell.length_b 58.627 _cell.length_c 46.798 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2I5M _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS monomeric 1 author_and_software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C 1 1 A,B,C 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_646 y+1,x-1,-z+1 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 87.9405 -50.772471 46.798 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ILE 51 X ILE 51 1_555 B MG MG . X MG 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.787 ? metalc ? metalc2 B MG MG . X MG 68 1_555 C O HOH . X HOH 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.83 ? metalc ? metalc3 B MG MG . X MG 68 1_555 C O HOH . X HOH 73 4_646 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2I5M _atom_sites.fract_transf_matrix[1][1] 0.017057 _atom_sites.fract_transf_matrix[1][2] 0.009848 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019696 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021368 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG X 1 68 24 MG MG . C 3 HOH X 1 69 1 HOH HOH . C 3 HOH X 2 70 2 HOH HOH . C 3 HOH X 3 71 3 HOH HOH . C 3 HOH X 4 72 4 HOH HOH . C 3 HOH X 5 73 5 HOH HOH . C 3 HOH X 6 74 6 HOH HOH . C 3 HOH X 7 75 7 HOH HOH . C 3 HOH X 8 76 8 HOH HOH . C 3 HOH X 9 77 9 HOH HOH . C 3 HOH X 10 78 10 HOH HOH . C 3 HOH X 11 79 11 HOH HOH . C 3 HOH X 12 80 12 HOH HOH . C 3 HOH X 13 81 13 HOH HOH . C 3 HOH X 14 82 14 HOH HOH . C 3 HOH X 15 83 15 HOH HOH . C 3 HOH X 16 84 16 HOH HOH . C 3 HOH X 17 85 17 HOH HOH . C 3 HOH X 18 86 18 HOH HOH . C 3 HOH X 19 87 19 HOH HOH . C 3 HOH X 20 88 20 HOH HOH . C 3 HOH X 21 89 21 HOH HOH . C 3 HOH X 22 90 22 HOH HOH . C 3 HOH X 23 91 23 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 40.622 _atom_site.Cartn_y -31.817 _atom_site.Cartn_z 23.074 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 60.7 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 68 _atom_site.auth_asym_id X _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 455 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #