data_2I61 # _model_server_result.job_id 4KRnQDfxcBrT12jg2FMxWw _model_server_result.datetime_utc '2024-10-25 20:23:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2i61 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":62}' # _entry.id 2I61 # _exptl.entry_id 2I61 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 6.941 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'LITHIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.75 _cell.angle_gamma 90 _cell.entry_id 2I61 _cell.length_a 19.66 _cell.length_b 51.423 _cell.length_c 28.917 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2I61 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 11 A CYS 10 1_555 A SG CYS 61 A CYS 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf2 A SG CYS 15 A CYS 14 1_555 A SG CYS 36 A CYS 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf3 A SG CYS 22 A CYS 21 1_555 A SG CYS 43 A CYS 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? disulf ? disulf4 A SG CYS 26 A CYS 25 1_555 A SG CYS 45 A CYS 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc1 A O ASP 9 A ASP 8 1_555 C LI LI . A LI 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.898 ? metalc ? metalc2 A OE1 GLU 20 A GLU 19 1_656 C LI LI . A LI 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.96 ? metalc ? metalc3 A O LYS 27 A LYS 26 1_555 D LI LI . A LI 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.902 ? metalc ? metalc4 A O TRP 37 A TRP 36 1_555 B LI LI . A LI 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.973 ? metalc ? metalc5 A O THR 60 A THR 59 1_555 C LI LI . A LI 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? metalc ? metalc6 B LI LI . A LI 62 1_555 K O HOH . A HOH 74 1_554 ? ? ? ? ? ? ? ? ? ? ? ? 1.893 ? metalc ? metalc7 B LI LI . A LI 62 1_555 K O HOH . A HOH 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.963 ? metalc ? metalc8 B LI LI . A LI 62 1_555 K O HOH . A HOH 84 1_655 ? ? ? ? ? ? ? ? ? ? ? ? 1.868 ? metalc ? metalc9 C LI LI . A LI 63 1_555 K O HOH . A HOH 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.938 ? metalc ? metalc10 D LI LI . A LI 64 1_555 K O HOH . A HOH 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.851 ? metalc ? metalc11 D LI LI . A LI 64 1_555 K O HOH . A HOH 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.877 ? metalc ? metalc12 D LI LI . A LI 64 1_555 K O HOH . A HOH 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.941 ? # _chem_comp.formula 'Li 1' _chem_comp.formula_weight 6.941 _chem_comp.id LI _chem_comp.mon_nstd_flag . _chem_comp.name 'LITHIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2I61 _atom_sites.fract_transf_matrix[1][1] 0.050865 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.016282 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019447 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.03631 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 LI A 1 62 1 LI LI . C 2 LI A 1 63 2 LI LI . D 2 LI A 1 64 3 LI LI . E 3 SO4 A 1 65 4 SO4 SO4 . F 4 EDO A 1 66 5 EDO EDO . G 4 EDO A 1 67 6 EDO EDO . H 4 EDO A 1 68 7 EDO EDO . I 5 CO2 A 1 69 8 CO2 CO2 . J 6 ACY A 1 70 9 ACY ACY . K 7 HOH A 1 71 62 HOH HOH . K 7 HOH A 2 72 63 HOH HOH . K 7 HOH A 3 73 64 HOH HOH . K 7 HOH A 4 74 65 HOH HOH . K 7 HOH A 5 75 66 HOH HOH . K 7 HOH A 6 76 67 HOH HOH . K 7 HOH A 7 77 68 HOH HOH . K 7 HOH A 8 78 69 HOH HOH . K 7 HOH A 9 79 71 HOH HOH . K 7 HOH A 10 80 72 HOH HOH . K 7 HOH A 11 81 73 HOH HOH . K 7 HOH A 12 82 75 HOH HOH . K 7 HOH A 13 83 76 HOH HOH . K 7 HOH A 14 84 77 HOH HOH . K 7 HOH A 15 85 79 HOH HOH . K 7 HOH A 16 86 80 HOH HOH . K 7 HOH A 17 87 82 HOH HOH . K 7 HOH A 18 88 83 HOH HOH . K 7 HOH A 19 89 84 HOH HOH . K 7 HOH A 20 90 85 HOH HOH . K 7 HOH A 21 91 87 HOH HOH . K 7 HOH A 22 92 88 HOH HOH . K 7 HOH A 23 93 89 HOH HOH . K 7 HOH A 24 94 90 HOH HOH . K 7 HOH A 25 95 91 HOH HOH . K 7 HOH A 26 96 93 HOH HOH . K 7 HOH A 27 97 94 HOH HOH . K 7 HOH A 28 98 95 HOH HOH . K 7 HOH A 29 99 96 HOH HOH . K 7 HOH A 30 100 97 HOH HOH . K 7 HOH A 31 101 98 HOH HOH . K 7 HOH A 32 102 99 HOH HOH . K 7 HOH A 33 103 100 HOH HOH . K 7 HOH A 34 104 101 HOH HOH . K 7 HOH A 35 105 102 HOH HOH . K 7 HOH A 36 106 103 HOH HOH . K 7 HOH A 37 107 104 HOH HOH . K 7 HOH A 38 108 105 HOH HOH . K 7 HOH A 39 109 106 HOH HOH . K 7 HOH A 40 110 107 HOH HOH . K 7 HOH A 41 111 108 HOH HOH . K 7 HOH A 42 112 114 HOH HOH . K 7 HOH A 43 113 116 HOH HOH . K 7 HOH A 44 114 117 HOH HOH . K 7 HOH A 45 115 118 HOH HOH . K 7 HOH A 46 116 119 HOH HOH . K 7 HOH A 47 117 120 HOH HOH . K 7 HOH A 48 118 123 HOH HOH . K 7 HOH A 49 119 124 HOH HOH . K 7 HOH A 50 120 126 HOH HOH . K 7 HOH A 51 121 127 HOH HOH . K 7 HOH A 52 122 128 HOH HOH . K 7 HOH A 53 123 129 HOH HOH . K 7 HOH A 54 124 130 HOH HOH . K 7 HOH A 55 125 131 HOH HOH . K 7 HOH A 56 126 132 HOH HOH . K 7 HOH A 57 127 134 HOH HOH . K 7 HOH A 58 128 136 HOH HOH . K 7 HOH A 59 129 137 HOH HOH . K 7 HOH A 60 130 139 HOH HOH . K 7 HOH A 61 131 140 HOH HOH . K 7 HOH A 62 132 142 HOH HOH . K 7 HOH A 63 133 143 HOH HOH . K 7 HOH A 64 134 144 HOH HOH . K 7 HOH A 65 135 145 HOH HOH . K 7 HOH A 66 136 146 HOH HOH . K 7 HOH A 67 137 148 HOH HOH . K 7 HOH A 68 138 149 HOH HOH . K 7 HOH A 69 139 150 HOH HOH . K 7 HOH A 70 140 151 HOH HOH . K 7 HOH A 71 141 152 HOH HOH . K 7 HOH A 72 142 154 HOH HOH . K 7 HOH A 73 143 156 HOH HOH . K 7 HOH A 74 144 157 HOH HOH . K 7 HOH A 75 145 158 HOH HOH . K 7 HOH A 76 146 159 HOH HOH . K 7 HOH A 77 147 160 HOH HOH . K 7 HOH A 78 148 161 HOH HOH . K 7 HOH A 79 149 162 HOH HOH . K 7 HOH A 80 150 163 HOH HOH . K 7 HOH A 81 151 201 HOH HOH . K 7 HOH A 82 152 202 HOH HOH . K 7 HOH A 83 153 203 HOH HOH . K 7 HOH A 84 154 204 HOH HOH . K 7 HOH A 85 155 205 HOH HOH . K 7 HOH A 86 156 206 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol LI _atom_site.label_atom_id LI _atom_site.label_comp_id LI _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 7.68 _atom_site.Cartn_y -6.435 _atom_site.Cartn_z -9.642 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 8.35 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id LI _atom_site.auth_comp_id LI _atom_site.auth_seq_id 62 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #